RNA–Protein interactions for RNA: ENST00000216877.10

PTPRA-201, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-201ENST00000216877 ZNF770Q6IQ21 691 aaPredicted RBP13.66□□□□□ -0.22
PTPRA-201ENST00000216877 FCRLAQ7L513 359 aa13.66□□□□□ -0.22
PTPRA-201ENST00000216877 MMP21Q8N119 569 aa13.66□□□□□ -0.22
PTPRA-201ENST00000216877 OR5T3Q8NGG3 340 aa13.66□□□□□ -0.22
PTPRA-201ENST00000216877 ZNF729A6NN14 1252 aaPredicted RBP13.65□□□□□ -0.22
PTPRA-201ENST00000216877 PRAMEF11O60813 436 aa13.65□□□□□ -0.22
PTPRA-201ENST00000216877 C1SP09871 688 aa13.65□□□□□ -0.22
PTPRA-201ENST00000216877 ADH6P28332 368 aa13.65□□□□□ -0.22
PTPRA-201ENST00000216877 MAT2AP31153 395 aaKnown RBP13.65□□□□□ -0.22
PTPRA-201ENST00000216877 PSEN2P49810 448 aa13.65□□□□□ -0.22
PTPRA-201ENST00000216877 MEF2AQ02078 507 aaPredicted RBP13.65□□□□□ -0.22
PTPRA-201ENST00000216877 KLF9Q13886 244 aaPredicted RBP13.65□□□□□ -0.22
PTPRA-201ENST00000216877 RAB41Q5JT25 222 aa13.65□□□□□ -0.22
PTPRA-201ENST00000216877 FAM69AQ5T7M9 428 aa13.65□□□□□ -0.22
PTPRA-201ENST00000216877 SCD5Q86SK9 330 aa13.65□□□□□ -0.22
PTPRA-201ENST00000216877 SLC9B2Q86UD5 537 aa13.65□□□□□ -0.22
PTPRA-201ENST00000216877 TMEM200AQ86VY9 491 aa13.65□□□□□ -0.22
PTPRA-201ENST00000216877 CMTM4Q8IZR5 234 aa13.65□□□□□ -0.22
PTPRA-201ENST00000216877 POGLUT1Q8NBL1 392 aa13.65□□□□□ -0.22
PTPRA-201ENST00000216877 C1GALT1Q9NS00 363 aa13.65□□□□□ -0.22
PTPRA-201ENST00000216877 OSER1Q9NX31 292 aa13.65□□□□□ -0.22
PTPRA-201ENST00000216877 MARCH2Q9P0N8 246 aa13.65□□□□□ -0.22
PTPRA-201ENST00000216877 MGAMO43451 1857 aa13.65□□□□□ -0.22
PTPRA-201ENST00000216877 SPTBP11277 2137 aa13.65□□□□□ -0.22
PTPRA-201ENST00000216877 H7C1Q1 480 aa13.65□□□□□ -0.22
PTPRA-201ENST00000216877 KLK1P06870 262 aa13.65□□□□□ -0.22
PTPRA-201ENST00000216877 PRKCZQ05513 592 aa13.65□□□□□ -0.22
PTPRA-201ENST00000216877 TIGD5Q53EQ6 642 aa13.65□□□□□ -0.22
PTPRA-201ENST00000216877 FAM76BQ5HYJ3 339 aa13.65□□□□□ -0.22
PTPRA-201ENST00000216877 FCRLBQ6BAA4 426 aa13.65□□□□□ -0.22
PTPRA-201ENST00000216877 OR2AK2Q8NG84 335 aa13.65□□□□□ -0.22
PTPRA-201ENST00000216877 GAL3ST3Q96A11 431 aa13.65□□□□□ -0.22
PTPRA-201ENST00000216877 FUBP3Q96I24 572 aaKnown RBP eCLIP13.65□□□□□ -0.222e-19■■■□□ 15.3
PTPRA-201ENST00000216877 CLCC1Q96S66 551 aa13.65□□□□□ -0.22
PTPRA-201ENST00000216877 RASL12Q9NYN1 266 aa13.65□□□□□ -0.22
PTPRA-201ENST00000216877 WSB2Q9NYS7 404 aaPredicted RBP13.65□□□□□ -0.22
PTPRA-201ENST00000216877 ZNF230Q9UIE0 474 aaPredicted RBP13.65□□□□□ -0.22
PTPRA-201ENST00000216877 NPTNQ9Y639 398 aa13.65□□□□□ -0.22
PTPRA-201ENST00000216877 C1orf226A1L170 272 aa13.65□□□□□ -0.22
PTPRA-201ENST00000216877 F5H5T6 163 aa13.65□□□□□ -0.22
PTPRA-201ENST00000216877 TERTO14746 1132 aaKnown RBP13.65□□□□□ -0.22
PTPRA-201ENST00000216877 FBP1P09467 338 aa13.65□□□□□ -0.22
PTPRA-201ENST00000216877 ANXA11P50995 505 aaKnown RBP13.65□□□□□ -0.22
PTPRA-201ENST00000216877 PSMD4P55036 377 aaKnown RBP13.65□□□□□ -0.22
PTPRA-201ENST00000216877 CDH4P55283 916 aa13.65□□□□□ -0.22
PTPRA-201ENST00000216877 DYRK1AQ13627 763 aa13.65□□□□□ -0.22
PTPRA-201ENST00000216877 CLEC9AQ6UXN8 241 aa13.65□□□□□ -0.22
PTPRA-201ENST00000216877 PGAP1Q75T13 922 aa13.65□□□□□ -0.22
PTPRA-201ENST00000216877 SLC38A5Q8WUX1 472 aa13.65□□□□□ -0.22
PTPRA-201ENST00000216877 SMPDL3BQ92485 455 aa13.65□□□□□ -0.22
PTPRA-201ENST00000216877 ARL11Q969Q4 196 aa13.65□□□□□ -0.22
PTPRA-201ENST00000216877 MGME1Q9BQP7 344 aa13.65□□□□□ -0.22
PTPRA-201ENST00000216877 NPDC1Q9NQX5 325 aaPredicted RBP13.65□□□□□ -0.22
PTPRA-201ENST00000216877 TMEM248Q9NWD8 314 aa13.65□□□□□ -0.22
PTPRA-201ENST00000216877 ASB6Q9NWX5 421 aa13.65□□□□□ -0.22
PTPRA-201ENST00000216877 CBLCQ9ULV8 474 aa13.65□□□□□ -0.22
PTPRA-201ENST00000216877 PRAMEF4O60810 478 aa13.64□□□□□ -0.23
PTPRA-201ENST00000216877 VNN2O95498 520 aa13.64□□□□□ -0.23
PTPRA-201ENST00000216877 DLSTP36957 453 aa13.64□□□□□ -0.23
PTPRA-201ENST00000216877 EIF2S3P41091 472 aaKnown RBP13.64□□□□□ -0.23
PTPRA-201ENST00000216877 GPR143P51810 404 aa13.64□□□□□ -0.23
PTPRA-201ENST00000216877 RAG2P55895 527 aa13.64□□□□□ -0.23
PTPRA-201ENST00000216877 MAP2K5Q13163 448 aa13.64□□□□□ -0.23
PTPRA-201ENST00000216877 PRAMEF9Q5VWM5 478 aa13.64□□□□□ -0.23
PTPRA-201ENST00000216877 CD200R1LQ6Q8B3 271 aa13.64□□□□□ -0.23
PTPRA-201ENST00000216877 THEM6Q8WUY1 208 aa13.64□□□□□ -0.23
PTPRA-201ENST00000216877 OTUB2Q96DC9 234 aa13.64□□□□□ -0.23
PTPRA-201ENST00000216877 MYEOVQ96EZ4 313 aa13.64□□□□□ -0.23
PTPRA-201ENST00000216877 HSPA12BQ96MM6 686 aa13.64□□□□□ -0.23
PTPRA-201ENST00000216877 TAS2R5Q9NYW4 299 aa13.64□□□□□ -0.23
PTPRA-201ENST00000216877 CAMK2AQ9UQM7 478 aa13.64□□□□□ -0.23
PTPRA-201ENST00000216877 hCG_1809904A0A1W2PP81 198 aa13.64□□□□□ -0.23
PTPRA-201ENST00000216877 A0A1W2PR64 198 aa13.64□□□□□ -0.23
PTPRA-201ENST00000216877 A0A1W2PRV1 198 aa13.64□□□□□ -0.23
PTPRA-201ENST00000216877 RAD1O60671 282 aa13.64□□□□□ -0.23
PTPRA-201ENST00000216877 COL9A2Q14055 689 aaPredicted RBP13.64□□□□□ -0.23
PTPRA-201ENST00000216877 EOGTQ5NDL2 527 aa13.64□□□□□ -0.23
PTPRA-201ENST00000216877 HACD4Q5VWC8 232 aa13.64□□□□□ -0.23
PTPRA-201ENST00000216877 EIF4E3Q8N5X7 224 aaKnown RBP13.64□□□□□ -0.23
PTPRA-201ENST00000216877 TMEM99Q8N816 258 aa13.64□□□□□ -0.23
PTPRA-201ENST00000216877 MAFIPQ8WZ33 124 aa13.64□□□□□ -0.23
PTPRA-201ENST00000216877 POM121Q96HA1 1249 aa13.64□□□□□ -0.23
PTPRA-201ENST00000216877 ZNF607Q96SK3 696 aa13.64□□□□□ -0.23
PTPRA-201ENST00000216877 CDV3Q9UKY7 258 aaKnown RBP13.64□□□□□ -0.23
PTPRA-201ENST00000216877 SLC27A6Q9Y2P4 619 aa13.64□□□□□ -0.23
PTPRA-201ENST00000216877 PQBP1O60828 265 aaKnown RBP13.64□□□□□ -0.23
PTPRA-201ENST00000216877 YIF1AO95070 293 aa13.64□□□□□ -0.23
PTPRA-201ENST00000216877 MPIP34949 423 aa13.64□□□□□ -0.23
PTPRA-201ENST00000216877 ZNF155Q12901 538 aaPredicted RBP13.64□□□□□ -0.23
PTPRA-201ENST00000216877 PCGF3Q3KNV8 242 aa13.64□□□□□ -0.23
PTPRA-201ENST00000216877 YOD1Q5VVQ6 348 aaPredicted RBP13.64□□□□□ -0.23
PTPRA-201ENST00000216877 TTLL10Q6ZVT0 673 aa13.64□□□□□ -0.23
PTPRA-201ENST00000216877 MUC20Q8N307 709 aaPredicted RBP13.64□□□□□ -0.23
PTPRA-201ENST00000216877 C2orf73Q8N5S3 287 aaPredicted RBP13.64□□□□□ -0.23
PTPRA-201ENST00000216877 OR4D11Q8NGI4 311 aa13.64□□□□□ -0.23
PTPRA-201ENST00000216877 SMIM4Q8WVI0 70 aa13.64□□□□□ -0.23
PTPRA-201ENST00000216877 MYLIPQ8WY64 445 aa13.64□□□□□ -0.23
PTPRA-201ENST00000216877 UBL7Q96S82 380 aaPredicted RBP13.64□□□□□ -0.23
PTPRA-201ENST00000216877 NAA11Q9BSU3 229 aaPredicted RBP13.64□□□□□ -0.23
PTPRA-201ENST00000216877 NDC1Q9BTX1 674 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms