RNA–Protein interactions for RNA: ENST00000211998.9

VCL-201, Transcript of vinculin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VCL, Length 5,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-201ENST00000211998 ID2Q02363 134 aa9.82□□□□□ -0.84
VCL-201ENST00000211998 LEG1Q6P5S2 330 aa9.82□□□□□ -0.84
VCL-201ENST00000211998 TMEM107Q6UX40 140 aa9.82□□□□□ -0.84
VCL-201ENST00000211998 OR4K14Q8NGD5 310 aa9.82□□□□□ -0.84
VCL-201ENST00000211998 RAB40AQ8WXH6 277 aa9.82□□□□□ -0.84
VCL-201ENST00000211998 DPH1Q9BZG8 443 aa9.82□□□□□ -0.84
VCL-201ENST00000211998 STRADBQ9C0K7 418 aa9.82□□□□□ -0.84
VCL-201ENST00000211998 KIF25Q9UIL4 384 aa9.82□□□□□ -0.84
VCL-201ENST00000211998 TMEM72A0PK05 275 aa9.81□□□□□ -0.84
VCL-201ENST00000211998 SEC14L5O43304 696 aa9.81□□□□□ -0.84
VCL-201ENST00000211998 STK17BO94768 372 aa9.81□□□□□ -0.84
VCL-201ENST00000211998 FXYD4P59646 89 aa9.81□□□□□ -0.84
VCL-201ENST00000211998 PITX1P78337 314 aaPredicted RBP9.81□□□□□ -0.84
VCL-201ENST00000211998 FIGNL1Q6PIW4 674 aa9.81□□□□□ -0.84
VCL-201ENST00000211998 TEX261Q6UWH6 196 aa9.81□□□□□ -0.84
VCL-201ENST00000211998 ZNF551Q7Z340 670 aaPredicted RBP9.81□□□□□ -0.84
VCL-201ENST00000211998 LIX1LQ8IVB5 337 aa9.81□□□□□ -0.84
VCL-201ENST00000211998 PNPLA1Q8N8W4 532 aa9.81□□□□□ -0.84
VCL-201ENST00000211998 OR4M1Q8NGD0 313 aa9.81□□□□□ -0.84
VCL-201ENST00000211998 BORCS8Q96FH0 119 aa9.81□□□□□ -0.84
VCL-201ENST00000211998 WDR92Q96MX6 357 aa9.81□□□□□ -0.84
VCL-201ENST00000211998 G6PC3Q9BUM1 346 aa9.81□□□□□ -0.84
VCL-201ENST00000211998 ST6GALNAC5Q9BVH7 336 aa9.81□□□□□ -0.84
VCL-201ENST00000211998 MVB12BQ9H7P6 319 aa9.81□□□□□ -0.84
VCL-201ENST00000211998 C1GALT1Q9NS00 363 aa9.81□□□□□ -0.84
VCL-201ENST00000211998 FBXL4Q9UKA2 621 aa9.81□□□□□ -0.84
VCL-201ENST00000211998 KPTNQ9Y664 436 aa9.81□□□□□ -0.84
VCL-201ENST00000211998 U3KQ87 197 aa9.81□□□□□ -0.84
VCL-201ENST00000211998 ZNF623O75123 536 aa9.81□□□□□ -0.84
VCL-201ENST00000211998 ATG12O94817 140 aa9.81□□□□□ -0.84
VCL-201ENST00000211998 CD300CQ08708 224 aa9.81□□□□□ -0.84
VCL-201ENST00000211998 LRIF1Q5T3J3 769 aa9.81□□□□□ -0.84
VCL-201ENST00000211998 DNAAF1Q8NEP3 725 aa9.81□□□□□ -0.84
VCL-201ENST00000211998 OR6N1Q8NGY5 312 aa9.81□□□□□ -0.84
VCL-201ENST00000211998 HUS1BQ8NHY5 278 aa9.81□□□□□ -0.84
VCL-201ENST00000211998 FAM213BQ8TBF2 198 aa9.81□□□□□ -0.84
VCL-201ENST00000211998 TMEM234Q8WY98 164 aa9.81□□□□□ -0.84
VCL-201ENST00000211998 HRASLS5Q96KN8 279 aa9.81□□□□□ -0.84
VCL-201ENST00000211998 ZNF582Q96NG8 517 aaPredicted RBP9.81□□□□□ -0.84
VCL-201ENST00000211998 ACTRT3Q9BYD9 372 aa9.81□□□□□ -0.84
VCL-201ENST00000211998 TMEM235A6NFC5 223 aa9.81□□□□□ -0.84
VCL-201ENST00000211998 HEXBP07686 556 aa9.81□□□□□ -0.84
VCL-201ENST00000211998 ZP3P21754 424 aa9.81□□□□□ -0.84
VCL-201ENST00000211998 TEKQ02763 1124 aa9.81□□□□□ -0.84
VCL-201ENST00000211998 LTBQ06643 244 aa9.81□□□□□ -0.84
VCL-201ENST00000211998 IRF4Q15306 451 aa9.81□□□□□ -0.84
VCL-201ENST00000211998 SLC9A3R2Q15599 337 aa9.81□□□□□ -0.84
VCL-201ENST00000211998 ZSCAN4Q8NAM6 433 aaPredicted RBP9.81□□□□□ -0.84
VCL-201ENST00000211998 TMEM100Q9NV29 134 aa9.81□□□□□ -0.84
VCL-201ENST00000211998 MEGF11A6BM72 1044 aa9.81□□□□□ -0.84
VCL-201ENST00000211998 C2orf78A6NCI8 922 aa9.81□□□□□ -0.84
VCL-201ENST00000211998 TRABD2BA6NFA1 517 aa9.81□□□□□ -0.84
VCL-201ENST00000211998 FAM171A2A8MVW0 826 aa9.81□□□□□ -0.84
VCL-201ENST00000211998 J3KTA2 159 aa9.81□□□□□ -0.84
VCL-201ENST00000211998 PHYHO14832 338 aa9.81□□□□□ -0.84
VCL-201ENST00000211998 GPR39O43194 453 aa9.81□□□□□ -0.84
VCL-201ENST00000211998 RAD1O60671 282 aa9.81□□□□□ -0.84
VCL-201ENST00000211998 LEFTY1O75610 366 aa9.81□□□□□ -0.84
VCL-201ENST00000211998 GNB3P16520 340 aa9.81□□□□□ -0.84
VCL-201ENST00000211998 UBE2IP63279 158 aaKnown RBP9.81□□□□□ -0.84
VCL-201ENST00000211998 LEXMQ3ZCV2 418 aa9.81□□□□□ -0.84
VCL-201ENST00000211998 ZNF695Q8IW36 515 aa9.81□□□□□ -0.84
VCL-201ENST00000211998 ADGRF3Q8IZF5 1079 aa9.81□□□□□ -0.84
VCL-201ENST00000211998 GPR148Q8TDV2 347 aa9.81□□□□□ -0.84
VCL-201ENST00000211998 ZNF587Q96SQ5 575 aaPredicted RBP9.81□□□□□ -0.84
VCL-201ENST00000211998 SUCNR1Q9BXA5 334 aa9.81□□□□□ -0.84
VCL-201ENST00000211998 SLC25A32Q9H2D1 315 aa9.81□□□□□ -0.84
VCL-201ENST00000211998 FAM208AQ9UK61 1670 aaKnown RBP9.81□□□□□ -0.84
VCL-201ENST00000211998 TP53I11O14683 189 aa9.8□□□□□ -0.84
VCL-201ENST00000211998 KCNK2O95069 426 aa9.8□□□□□ -0.84
VCL-201ENST00000211998 OR2C1O95371 312 aa9.8□□□□□ -0.84
VCL-201ENST00000211998 ACRV1P26436 265 aa9.8□□□□□ -0.84
VCL-201ENST00000211998 GPR143P51810 404 aa9.8□□□□□ -0.84
VCL-201ENST00000211998 CHRNEQ04844 493 aa9.8□□□□□ -0.84
VCL-201ENST00000211998 SOWAHCQ53LP3 525 aaPredicted RBP9.8□□□□□ -0.84
VCL-201ENST00000211998 SFXN4Q6P4A7 337 aa9.8□□□□□ -0.84
VCL-201ENST00000211998 ZNF561Q8N587 486 aa9.8□□□□□ -0.84
VCL-201ENST00000211998 ZNF578Q96N58 590 aaPredicted RBP9.8□□□□□ -0.84
VCL-201ENST00000211998 PLEKHA3Q9HB20 300 aa9.8□□□□□ -0.84
VCL-201ENST00000211998 SLC9B1P1A6NJY1 282 aa9.8□□□□□ -0.84
VCL-201ENST00000211998 KLF8O95600 359 aaPredicted RBP9.8□□□□□ -0.84
VCL-201ENST00000211998 TPOP07202 933 aa9.8□□□□□ -0.84
VCL-201ENST00000211998 PRSS56P0CW18 603 aa9.8□□□□□ -0.84
VCL-201ENST00000211998 SHC1P29353 583 aa9.8□□□□□ -0.84
VCL-201ENST00000211998 GABRA3P34903 492 aa9.8□□□□□ -0.84
VCL-201ENST00000211998 FAM209AQ5JX71 171 aa9.8□□□□□ -0.84
VCL-201ENST00000211998 SAXO2Q658L1 398 aa9.8□□□□□ -0.84
VCL-201ENST00000211998 KDELC1Q6UW63 502 aa9.8□□□□□ -0.84
VCL-201ENST00000211998 Q6ZVL8 140 aa9.8□□□□□ -0.84
VCL-201ENST00000211998 CCDC71LQ8N9Z2 235 aa9.8□□□□□ -0.84
VCL-201ENST00000211998 ZNF439Q8NDP4 499 aa9.8□□□□□ -0.84
VCL-201ENST00000211998 HHIPL1Q96JK4 782 aa9.8□□□□□ -0.84
VCL-201ENST00000211998 C16orf70Q9BSU1 422 aa9.8□□□□□ -0.84
VCL-201ENST00000211998 NMNAT2Q9BZQ4 307 aa9.8□□□□□ -0.84
VCL-201ENST00000211998 SEMA4CQ9C0C4 833 aa9.8□□□□□ -0.84
VCL-201ENST00000211998 PRTFDC1Q9NRG1 225 aa9.8□□□□□ -0.84
VCL-201ENST00000211998 BTNL2Q9UIR0 455 aa9.8□□□□□ -0.84
VCL-201ENST00000211998 BACE2Q9Y5Z0 518 aa9.8□□□□□ -0.84
VCL-201ENST00000211998 CICQ96RK0 1608 aaPredicted RBP9.8□□□□□ -0.84
VCL-201ENST00000211998 A0A0D9SEW6 157 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms