RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 TRIM63Q969Q1 353 aa12.15□□□□□ -0.46
CTNS-201ENST00000046640 PRSS27Q9BQR3 290 aa12.15□□□□□ -0.46
CTNS-201ENST00000046640 ZNF222Q9UK12 451 aa12.15□□□□□ -0.46
CTNS-201ENST00000046640 FBXL4Q9UKA2 621 aa12.15□□□□□ -0.46
CTNS-201ENST00000046640 SNTNA6NMZ2 147 aa12.15□□□□□ -0.46
CTNS-201ENST00000046640 STK25O00506 426 aa12.15□□□□□ -0.46
CTNS-201ENST00000046640 ADAM11O75078 769 aa12.15□□□□□ -0.46
CTNS-201ENST00000046640 NAT1P18440 290 aa12.15□□□□□ -0.46
CTNS-201ENST00000046640 ZNF10P21506 573 aaPredicted RBP12.15□□□□□ -0.46
CTNS-201ENST00000046640 MAOBP27338 520 aa12.15□□□□□ -0.46
CTNS-201ENST00000046640 ERP29P30040 261 aaKnown RBP12.15□□□□□ -0.46
CTNS-201ENST00000046640 ARFIP1P53367 373 aa12.15□□□□□ -0.46
CTNS-201ENST00000046640 MAZP56270 477 aaKnown RBP12.15□□□□□ -0.46
CTNS-201ENST00000046640 OR10A3P58181 314 aa12.15□□□□□ -0.46
CTNS-201ENST00000046640 FXYD6P3P58550 94 aa12.15□□□□□ -0.46
CTNS-201ENST00000046640 EIF2B5Q13144 721 aaKnown RBP12.15□□□□□ -0.46
CTNS-201ENST00000046640 PRICKLE4Q2TBC4 344 aa12.15□□□□□ -0.46
CTNS-201ENST00000046640 NDUFAF6Q330K2 333 aa12.15□□□□□ -0.46
CTNS-201ENST00000046640 AADACL4Q5VUY2 407 aa12.15□□□□□ -0.46
CTNS-201ENST00000046640 THSD4Q6ZMP0 1018 aa12.15□□□□□ -0.46
CTNS-201ENST00000046640 RANBP3LQ86VV4 465 aaPredicted RBP12.15□□□□□ -0.46
CTNS-201ENST00000046640 NR2C2APQ86WQ0 139 aa12.15□□□□□ -0.46
CTNS-201ENST00000046640 CA13Q8N1Q1 262 aa12.15□□□□□ -0.46
CTNS-201ENST00000046640 ZNF619Q8N2I2 560 aa12.15□□□□□ -0.46
CTNS-201ENST00000046640 SLC44A3Q8N4M1 653 aa12.15□□□□□ -0.46
CTNS-201ENST00000046640 POGLUT1Q8NBL1 392 aa12.15□□□□□ -0.46
CTNS-201ENST00000046640 OR4M1Q8NGD0 313 aa12.15□□□□□ -0.46
CTNS-201ENST00000046640 OR8H1Q8NGG4 311 aa12.15□□□□□ -0.46
CTNS-201ENST00000046640 PEX11GQ96HA9 241 aa12.15□□□□□ -0.46
CTNS-201ENST00000046640 TMEM43Q9BTV4 400 aa12.15□□□□□ -0.46
CTNS-201ENST00000046640 UCKL1Q9NWZ5 548 aa12.15□□□□□ -0.46
CTNS-201ENST00000046640 NLGN3Q9NZ94 848 aa12.15□□□□□ -0.46
CTNS-201ENST00000046640 SLC23A1Q9UHI7 598 aa12.15□□□□□ -0.46
CTNS-201ENST00000046640 CBLCQ9ULV8 474 aa12.15□□□□□ -0.46
CTNS-201ENST00000046640 SPACA6W5XKT8 324 aa12.15□□□□□ -0.46
CTNS-201ENST00000046640 SEC16AO15027 2179 aa12.15□□□□□ -0.47
CTNS-201ENST00000046640 A0A1W2PQ72 361 aa12.14□□□□□ -0.47
CTNS-201ENST00000046640 TMEM129A0AVI4 362 aa12.14□□□□□ -0.47
CTNS-201ENST00000046640 SLC9B1P1A6NJY1 282 aa12.14□□□□□ -0.47
CTNS-201ENST00000046640 C2CD4DB7Z1M9 353 aa12.14□□□□□ -0.47
CTNS-201ENST00000046640 GALR3O60755 368 aaPredicted RBP12.14□□□□□ -0.47
CTNS-201ENST00000046640 RFPL3O75679 317 aa12.14□□□□□ -0.47
CTNS-201ENST00000046640 OR5F1O95221 314 aa12.14□□□□□ -0.47
CTNS-201ENST00000046640 SHC1P29353 583 aa12.14□□□□□ -0.47
CTNS-201ENST00000046640 STAT5AP42229 794 aa12.14□□□□□ -0.47
CTNS-201ENST00000046640 DUSP8Q13202 625 aa12.14□□□□□ -0.47
CTNS-201ENST00000046640 WDR45BQ5MNZ6 344 aa12.14□□□□□ -0.47
CTNS-201ENST00000046640 FHL5Q5TD97 284 aa12.14□□□□□ -0.47
CTNS-201ENST00000046640 CXXC5Q7LFL8 322 aaKnown RBP12.14□□□□□ -0.47
CTNS-201ENST00000046640 ELMOD2Q8IZ81 293 aa12.14□□□□□ -0.47
CTNS-201ENST00000046640 FANK1Q8TC84 345 aa12.14□□□□□ -0.47
CTNS-201ENST00000046640 TMEM239Q8WW34 195 aa12.14□□□□□ -0.47
CTNS-201ENST00000046640 MED30Q96HR3 178 aa12.14□□□□□ -0.47
CTNS-201ENST00000046640 IFT27Q9BW83 186 aa12.14□□□□□ -0.47
CTNS-201ENST00000046640 ZNF350Q9GZX5 532 aa12.14□□□□□ -0.47
CTNS-201ENST00000046640 SIDT1Q9NXL6 827 aaKnown RBP12.14□□□□□ -0.47
CTNS-201ENST00000046640 DTX4Q9Y2E6 619 aa12.14□□□□□ -0.47
CTNS-201ENST00000046640 EXOSC1Q9Y3B2 195 aaKnown RBP12.14□□□□□ -0.47
CTNS-201ENST00000046640 SIRT4Q9Y6E7 314 aaPredicted RBP12.14□□□□□ -0.47
CTNS-201ENST00000046640 UNC119BA6NIH7 251 aa12.14□□□□□ -0.47
CTNS-201ENST00000046640 ZSCAN5BA6NJL1 495 aa12.14□□□□□ -0.47
CTNS-201ENST00000046640 KDM4EB2RXH2 506 aaPredicted RBP12.14□□□□□ -0.47
CTNS-201ENST00000046640 TNFRSF10CO14798 259 aa12.14□□□□□ -0.47
CTNS-201ENST00000046640 EEF1E1O43324 174 aaKnown RBP12.14□□□□□ -0.47
CTNS-201ENST00000046640 CHST10O43529 356 aa12.14□□□□□ -0.47
CTNS-201ENST00000046640 AKAP8O43823 692 aaKnown RBP12.14□□□□□ -0.47
CTNS-201ENST00000046640 HLA-DPB1P04440 258 aa12.14□□□□□ -0.47
CTNS-201ENST00000046640 HOXC4P09017 264 aaPredicted RBP12.14□□□□□ -0.47
CTNS-201ENST00000046640 TRAPPC2P0DI81 140 aa12.14□□□□□ -0.47
CTNS-201ENST00000046640 TRAPPC2BP0DI82 140 aa12.14□□□□□ -0.47
CTNS-201ENST00000046640 TBXA2RP21731 343 aa12.14□□□□□ -0.47
CTNS-201ENST00000046640 HLA-DMAP28067 261 aa12.14□□□□□ -0.47
CTNS-201ENST00000046640 PGDP52209 483 aa12.14□□□□□ -0.47
CTNS-201ENST00000046640 SLC3A1Q07837 685 aa12.14□□□□□ -0.47
CTNS-201ENST00000046640 SLC25A30Q5SVS4 291 aa12.14□□□□□ -0.47
CTNS-201ENST00000046640 ARL9Q6T311 187 aa12.14□□□□□ -0.47
CTNS-201ENST00000046640 KLHL36Q8N4N3 616 aa12.14□□□□□ -0.47
CTNS-201ENST00000046640 SAMD12Q8N8I0 201 aa12.14□□□□□ -0.47
CTNS-201ENST00000046640 CFAP54Q96N23 3096 aa12.14□□□□□ -0.47
CTNS-201ENST00000046640 ARPC5LQ9BPX5 153 aa12.14□□□□□ -0.47
CTNS-201ENST00000046640 PPIL3Q9H2H8 161 aaKnown RBP12.14□□□□□ -0.47
CTNS-201ENST00000046640 FBRSQ9HAH7 460 aa12.14□□□□□ -0.47
CTNS-201ENST00000046640 FGF20Q9NP95 211 aaPredicted RBP12.14□□□□□ -0.47
CTNS-201ENST00000046640 COQ3Q9NZJ6 369 aa12.14□□□□□ -0.47
CTNS-201ENST00000046640 A0A0J9YY10 115 aa12.13□□□□□ -0.47
CTNS-201ENST00000046640 TRDV1A0A1B0GX56 115 aa12.13□□□□□ -0.47
CTNS-201ENST00000046640 TRAPPC13A5PLN9 417 aa12.13□□□□□ -0.47
CTNS-201ENST00000046640 CDHR4A6H8M9 788 aa12.13□□□□□ -0.47
CTNS-201ENST00000046640 FABP7O15540 132 aa12.13□□□□□ -0.47
CTNS-201ENST00000046640 ORC5O43913 435 aa12.13□□□□□ -0.47
CTNS-201ENST00000046640 NID1P14543 1247 aa12.13□□□□□ -0.47
CTNS-201ENST00000046640 RRAS2P62070 204 aaPredicted RBP12.13□□□□□ -0.47
CTNS-201ENST00000046640 BTG2P78543 158 aa12.13□□□□□ -0.47
CTNS-201ENST00000046640 MRPS21P82921 87 aaKnown RBP12.13□□□□□ -0.47
CTNS-201ENST00000046640 PLAURQ03405 335 aa12.13□□□□□ -0.47
CTNS-201ENST00000046640 ARMC6Q6NXE6 501 aa12.13□□□□□ -0.47
CTNS-201ENST00000046640 TMEM91Q6ZNR0 172 aa12.13□□□□□ -0.47
CTNS-201ENST00000046640 SYT9Q86SS6 491 aa12.13□□□□□ -0.47
CTNS-201ENST00000046640 GJD3Q8N144 294 aa12.13□□□□□ -0.47
CTNS-201ENST00000046640 ANKRD9Q96BM1 317 aaPredicted RBP12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms