RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 Trpm6Q8CIR4 2028 aa10.61□□□□□ -0.71
Topbp1-201ENSMUST00000035164 Prdm13E9PZZ1 754 aa10.61□□□□□ -0.71
Topbp1-201ENSMUST00000035164 Msl3l2G3X992 371 aa10.61□□□□□ -0.71
Topbp1-201ENSMUST00000035164 Ifi204P0DOV2 619 aa10.61□□□□□ -0.71
Topbp1-201ENSMUST00000035164 Ppp5cQ60676 499 aa10.61□□□□□ -0.71
Topbp1-201ENSMUST00000035164 Rbm38Q62176 237 aaKnown RBP10.61□□□□□ -0.71
Topbp1-201ENSMUST00000035164 Ube2j2Q6P073 259 aa10.61□□□□□ -0.71
Topbp1-201ENSMUST00000035164 Olfr1351Q8VGU6 319 aa10.61□□□□□ -0.71
Topbp1-201ENSMUST00000035164 Asb8Q91ZT9 288 aa10.61□□□□□ -0.71
Topbp1-201ENSMUST00000035164 Ybx2Q9Z2C8 360 aaKnown RBP10.61□□□□□ -0.71
Topbp1-201ENSMUST00000035164 Cytl1A1E5L0 139 aa10.61□□□□□ -0.71
Topbp1-201ENSMUST00000035164 Fnd3c2A2AP83 941 aa10.61□□□□□ -0.71
Topbp1-201ENSMUST00000035164 Tomm5B1AXP6 51 aa10.61□□□□□ -0.71
Topbp1-201ENSMUST00000035164 Tas2r122D3YU55 309 aa10.61□□□□□ -0.71
Topbp1-201ENSMUST00000035164 Gm11236J3QMS7 360 aa10.61□□□□□ -0.71
Topbp1-201ENSMUST00000035164 Cd38P56528 304 aa10.61□□□□□ -0.71
Topbp1-201ENSMUST00000035164 Adra2aQ01338 450 aa10.61□□□□□ -0.71
Topbp1-201ENSMUST00000035164 B430218F22RikQ8BQR5 223 aa10.61□□□□□ -0.71
Topbp1-201ENSMUST00000035164 Zdhhc1Q8R0N9 484 aa10.61□□□□□ -0.71
Topbp1-201ENSMUST00000035164 Hbp1Q8R316 516 aa10.61□□□□□ -0.71
Topbp1-201ENSMUST00000035164 Rfc3Q8R323 356 aaKnown RBP10.61□□□□□ -0.71
Topbp1-201ENSMUST00000035164 Etv3Q8R4Z4 513 aa10.61□□□□□ -0.71
Topbp1-201ENSMUST00000035164 Sav1Q8VEB2 386 aa10.61□□□□□ -0.71
Topbp1-201ENSMUST00000035164 Tnk1Q99ML2 666 aa10.61□□□□□ -0.71
Topbp1-201ENSMUST00000035164 Frem3Q5H8B9 2123 aa10.61□□□□□ -0.71
Topbp1-201ENSMUST00000035164 Mamdc4A2AJA7 1228 aa10.61□□□□□ -0.71
Topbp1-201ENSMUST00000035164 Xrcc1Q60596 631 aa10.61□□□□□ -0.71
Topbp1-201ENSMUST00000035164 Lrrn1Q61809 716 aa10.61□□□□□ -0.71
Topbp1-201ENSMUST00000035164 Olfr17Q7TRM9 315 aa10.61□□□□□ -0.71
Topbp1-201ENSMUST00000035164 NarsQ8BP47 559 aa10.61□□□□□ -0.71
Topbp1-201ENSMUST00000035164 C1qtnf7Q8BVD7 289 aa10.61□□□□□ -0.71
Topbp1-201ENSMUST00000035164 Ankmy1Q8C0W1 906 aa10.61□□□□□ -0.71
Topbp1-201ENSMUST00000035164 Olfr514Q8VFZ6 310 aa10.61□□□□□ -0.71
Topbp1-201ENSMUST00000035164 Mrm2Q9CPY0 246 aa10.61□□□□□ -0.71
Topbp1-201ENSMUST00000035164 Tssc4Q9JHE7 317 aa10.61□□□□□ -0.71
Topbp1-201ENSMUST00000035164 Srd5a3Q9WUP4 330 aa10.61□□□□□ -0.71
Topbp1-201ENSMUST00000035164 AtrxQ61687 2476 aaKnown RBP10.6□□□□□ -0.71
Topbp1-201ENSMUST00000035164 Gm3594E9Q2A7 267 aa10.6□□□□□ -0.71
Topbp1-201ENSMUST00000035164 Gm21812J3QN84 227 aa10.6□□□□□ -0.71
Topbp1-201ENSMUST00000035164 9330182O14RikJ3QNB2 140 aa10.6□□□□□ -0.71
Topbp1-201ENSMUST00000035164 Olfr1360K9J6X0 313 aa10.6□□□□□ -0.71
Topbp1-201ENSMUST00000035164 Ltb4rO88855 351 aa10.6□□□□□ -0.71
Topbp1-201ENSMUST00000035164 NelfeP19426 375 aa10.6□□□□□ -0.71
Topbp1-201ENSMUST00000035164 Cd40lgP27548 260 aa10.6□□□□□ -0.71
Topbp1-201ENSMUST00000035164 MatkP41242 505 aa10.6□□□□□ -0.71
Topbp1-201ENSMUST00000035164 Krt33bQ61897 404 aa10.6□□□□□ -0.71
Topbp1-201ENSMUST00000035164 NnatQ61979 81 aa10.6□□□□□ -0.71
Topbp1-201ENSMUST00000035164 Olfr1359Q7TQU5 313 aa10.6□□□□□ -0.71
Topbp1-201ENSMUST00000035164 Olfr1058Q7TR74 316 aa10.6□□□□□ -0.71
Topbp1-201ENSMUST00000035164 Elp6Q8BK75 266 aa10.6□□□□□ -0.71
Topbp1-201ENSMUST00000035164 Slc22a29Q8BWG6 551 aa10.6□□□□□ -0.71
Topbp1-201ENSMUST00000035164 Samd14Q8K070 417 aa10.6□□□□□ -0.71
Topbp1-201ENSMUST00000035164 Chrna3Q8R4G9 499 aa10.6□□□□□ -0.71
Topbp1-201ENSMUST00000035164 Olfr1151Q8VFQ8 308 aa10.6□□□□□ -0.71
Topbp1-201ENSMUST00000035164 AjubaQ91XC0 547 aa10.6□□□□□ -0.71
Topbp1-201ENSMUST00000035164 Tmigd1Q9D7L8 261 aa10.6□□□□□ -0.71
Topbp1-201ENSMUST00000035164 Slc7a5Q9Z127 512 aa10.6□□□□□ -0.71
Topbp1-201ENSMUST00000035164 Mocs2Q9Z223 189 aa10.6□□□□□ -0.71
Topbp1-201ENSMUST00000035164 Olfr110A2RT31 317 aa10.6□□□□□ -0.71
Topbp1-201ENSMUST00000035164 Gm6619F6URP1 175 aa10.6□□□□□ -0.71
Topbp1-201ENSMUST00000035164 H2-Q9P14431 200 aa10.6□□□□□ -0.71
Topbp1-201ENSMUST00000035164 Traf4Q61382 470 aa10.6□□□□□ -0.71
Topbp1-201ENSMUST00000035164 CelQ64285 599 aa10.6□□□□□ -0.71
Topbp1-201ENSMUST00000035164 Olfr111Q7TRK1 317 aa10.6□□□□□ -0.71
Topbp1-201ENSMUST00000035164 Slc2a12Q8BFW9 622 aa10.6□□□□□ -0.71
Topbp1-201ENSMUST00000035164 Zfp189Q8BKP2 608 aa10.6□□□□□ -0.71
Topbp1-201ENSMUST00000035164 Ncr1Q8C567 325 aa10.6□□□□□ -0.71
Topbp1-201ENSMUST00000035164 Fam221aQ8C790 301 aa10.6□□□□□ -0.71
Topbp1-201ENSMUST00000035164 Vmn1r74Q8R290 304 aa10.6□□□□□ -0.71
Topbp1-201ENSMUST00000035164 Olfr108Q8VFA1 320 aa10.6□□□□□ -0.71
Topbp1-201ENSMUST00000035164 Sh3bp4Q921I6 962 aa10.6□□□□□ -0.71
Topbp1-201ENSMUST00000035164 Prelid3bQ9CYY7 195 aa10.6□□□□□ -0.71
Topbp1-201ENSMUST00000035164 Ceacam20Q9D2Z1 577 aa10.6□□□□□ -0.71
Topbp1-201ENSMUST00000035164 4932443I19RikA0A286YE38 169 aa10.6□□□□□ -0.71
Topbp1-201ENSMUST00000035164 CerklA2AQH1 525 aa10.6□□□□□ -0.71
Topbp1-201ENSMUST00000035164 Bcl2a1bQ497M6 172 aa10.6□□□□□ -0.71
Topbp1-201ENSMUST00000035164 Dtd2Q8BHA3 168 aa10.6□□□□□ -0.71
Topbp1-201ENSMUST00000035164 Znf436Q8BPP0 452 aa10.6□□□□□ -0.71
Topbp1-201ENSMUST00000035164 Apoa5Q8C7G5 368 aa10.6□□□□□ -0.71
Topbp1-201ENSMUST00000035164 Slc1a7Q8JZR4 559 aa10.6□□□□□ -0.71
Topbp1-201ENSMUST00000035164 Slc16a14Q8K1C7 512 aa10.6□□□□□ -0.71
Topbp1-201ENSMUST00000035164 Fahd1Q8R0F8 227 aa10.6□□□□□ -0.71
Topbp1-201ENSMUST00000035164 Ndc1Q8VCB1 673 aaKnown RBP10.6□□□□□ -0.71
Topbp1-201ENSMUST00000035164 Vsx1Q91V10 363 aa10.6□□□□□ -0.71
Topbp1-201ENSMUST00000035164 ScgnQ91WD9 276 aa10.6□□□□□ -0.71
Topbp1-201ENSMUST00000035164 Olfr73Q920P2 313 aa10.6□□□□□ -0.71
Topbp1-201ENSMUST00000035164 Slc10a6Q9CXB2 373 aa10.6□□□□□ -0.71
Topbp1-201ENSMUST00000035164 Vmn1r48Q9EQ52 302 aa10.6□□□□□ -0.71
Topbp1-201ENSMUST00000035164 Dnajb2Q9QYI5 324 aa10.6□□□□□ -0.71
Topbp1-201ENSMUST00000035164 Casp8ap2Q9WUF3 1962 aa10.6□□□□□ -0.71
Topbp1-201ENSMUST00000035164 Stpg3A2RSX4 306 aa10.6□□□□□ -0.71
Topbp1-201ENSMUST00000035164 Fam71dD3YV92 440 aa10.6□□□□□ -0.71
Topbp1-201ENSMUST00000035164 Slc38a6G3UVW3 457 aa10.6□□□□□ -0.71
Topbp1-201ENSMUST00000035164 Gm21797J3QNW5 180 aa10.6□□□□□ -0.71
Topbp1-201ENSMUST00000035164 Pgam2O70250 253 aa10.6□□□□□ -0.71
Topbp1-201ENSMUST00000035164 RetP35546 1115 aa10.6□□□□□ -0.71
Topbp1-201ENSMUST00000035164 Sec24aQ3U2P1 1090 aa10.6□□□□□ -0.71
Topbp1-201ENSMUST00000035164 Lcn12Q6JVL5 193 aa10.6□□□□□ -0.71
Topbp1-201ENSMUST00000035164 DgkzQ80UP3 929 aa10.6□□□□□ -0.71
Topbp1-201ENSMUST00000035164 Spata7Q80VP2 582 aa10.6□□□□□ -0.71
Retrieved 100 of 22,080 RNA–protein pairs in 30.9 ms