RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 Spata7Q80VP2 582 aa9.58□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Olfr1424Q8VFV1 313 aa9.58□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Wdr45Q91VM3 360 aa9.58□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Rnf141Q99MB7 230 aa9.58□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Arpc5Q9CPW4 151 aa9.58□□□□□ -0.88
Ubr1-201ENSMUST00000028728 SrrQ9QZX7 339 aa9.58□□□□□ -0.88
Ubr1-201ENSMUST00000028728 AgtrapQ9WVK0 161 aa9.58□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Dlg5E9Q9R9 1921 aa9.58□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Ndufaf5A2APY7 343 aa9.58□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Htra4A2RT60 483 aa9.58□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Gm12790B1AUV6 201 aa9.58□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Gm5901D3YVJ1 333 aa9.58□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Vsig10lD3YZF7 868 aa9.58□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Vmn2r96E9PZU5 664 aa9.58□□□□□ -0.88
Ubr1-201ENSMUST00000028728 5430401F13RikE9Q328 175 aa9.58□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Gm6619F6URP1 175 aa9.58□□□□□ -0.88
Ubr1-201ENSMUST00000028728 FurinP23188 793 aa9.58□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Nup43P59235 380 aa9.58□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Actr1aP61164 376 aa9.58□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Tra2bP62996 288 aaKnown RBP9.58□□□□□ -0.88
Ubr1-201ENSMUST00000028728 MakQ04859 622 aa9.58□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Bdkrb1Q61125 334 aa9.58□□□□□ -0.88
Ubr1-201ENSMUST00000028728 CishQ62225 257 aa9.58□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Kansl1Q80TG1 1036 aaKnown RBP9.58□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Mtnr1bQ8CIQ6 364 aa9.58□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Unc5aQ8K1S4 898 aa9.58□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Actr1bQ8R5C5 376 aa9.58□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Zfyve21Q8VCM3 234 aa9.58□□□□□ -0.88
Ubr1-201ENSMUST00000028728 EsamQ925F2 394 aa9.58□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Rab28Q99KL7 221 aa9.58□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Tex46Q9CPU3 165 aa9.58□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Acad8Q9D7B6 413 aa9.58□□□□□ -0.88
Ubr1-201ENSMUST00000028728 PrepQ9QUR6 710 aa9.58□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Gstz1Q9WVL0 216 aa9.58□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Tiam2Q6ZPF3 1715 aa9.58□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Mpeg1A1L314 713 aa9.58□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Ttll2A4Q9E4 540 aa9.58□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Nkx6-2D3Z4R4 277 aa9.58□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Gm20715E9Q3L7 95 aa9.58□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Gml2G5E8L7 176 aa9.58□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Dsg2O55111 1122 aa9.58□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Adh5P28474 374 aa9.58□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Ctnnb1Q02248 781 aaKnown RBP9.58□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Grhl3Q5FWH3 603 aa9.58□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Pcsk7Q61139 770 aa9.58□□□□□ -0.88
Ubr1-201ENSMUST00000028728 IfnkQ7TSL0 199 aa9.58□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Dctn4Q8CBY8 467 aa9.58□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Vmn1r81Q8R286 306 aa9.58□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Izumo1Q9D9J7 397 aa9.58□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Sec61a2Q9JLR1 476 aa9.58□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Rasal1Q9Z268 799 aa9.58□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Olfr1303A2AVW1 312 aa9.57□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Olfr1471F6QVZ8 314 aa9.57□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Hsd17b12O70503 312 aa9.57□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Stc2O88452 296 aa9.57□□□□□ -0.88
Ubr1-201ENSMUST00000028728 HckP08103 524 aa9.57□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Pgap2Q3TQR0 254 aa9.57□□□□□ -0.88
Ubr1-201ENSMUST00000028728 RgmaQ6PCX7 454 aa9.57□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Slc35d3Q8BGF8 422 aa9.57□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Mmp28Q8CGV8 520 aa9.57□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Med17Q8VCD5 649 aaKnown RBP9.57□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Olfr1008Q8VGC7 313 aa9.57□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Olfr676Q8VGZ9 317 aa9.57□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Atg5Q99J83 275 aa9.57□□□□□ -0.88
Ubr1-201ENSMUST00000028728 TrirQ9D735 173 aa9.57□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Hapln2Q9ESM3 341 aa9.57□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Olfr1034A0A1L1ST14 310 aa9.57□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Vmn1r124D3YTX4 307 aa9.57□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Gm10112D3YWP5 117 aa9.57□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Olfr543E9PWI5 336 aa9.57□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Cx3cl1O35188 395 aa9.57□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Id2P41136 134 aa9.57□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Cds1P98191 461 aa9.57□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Hoxd1Q01822 328 aa9.57□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Gm14226Q3TZL0 686 aa9.57□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Q5XFZ0 217 aa9.57□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Mep1bQ61847 704 aa9.57□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Slc6a5Q761V0 799 aa9.57□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Lats1Q8BYR2 1129 aa9.57□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Fbxw14Q8C2Y5 466 aa9.57□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Vmn1r234Q8R298 329 aa9.57□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Vmn1r21Q8R2C6 297 aa9.57□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Timm22Q9CQ85 194 aa9.57□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Srd5a3Q9WUP4 330 aa9.57□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Bmp7P23359 430 aa9.57□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Hrh3P58406 445 aa9.57□□□□□ -0.88
Ubr1-201ENSMUST00000028728 RinlQ80UW3 563 aa9.57□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Stk35Q80ZW0 539 aa9.57□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Tram1l1Q8QZR0 363 aa9.57□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Olfr1309Q8VF83 320 aa9.57□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Bbox1Q924Y0 387 aa9.57□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Efcab11Q9D0E5 162 aa9.57□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Fbxl12Q9EPX5 326 aa9.57□□□□□ -0.88
Ubr1-201ENSMUST00000028728 C1galt1c1Q9JMG2 316 aa9.57□□□□□ -0.88
Ubr1-201ENSMUST00000028728 D17h6s53eQ9Z1R4 293 aa9.57□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Cldn8Q9Z260 225 aa9.57□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Ccdc88cQ6VGS5 2009 aa9.57□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Cd209fD3Z1H5 274 aa9.57□□□□□ -0.88
Ubr1-201ENSMUST00000028728 CtssO70370 340 aa9.57□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Zp3P10761 424 aa9.57□□□□□ -0.88
Retrieved 100 of 22,080 RNA–protein pairs in 44.3 ms