RNA–Protein interactions for RNA: ENSMUST00000028280.13

Col5a1-201, Transcript of Collagen alpha-1(V) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col5a1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1-201ENSMUST00000028280 Ugt2b37Q8VCN3 530 aa13.21□□□□□ -0.29
Col5a1-201ENSMUST00000028280 Ugt2b38Q91WH2 530 aa13.21□□□□□ -0.29
Col5a1-201ENSMUST00000028280 Slc41a3Q921R8 488 aa13.21□□□□□ -0.29
Col5a1-201ENSMUST00000028280 Zbtb8aQ9CWH1 434 aa13.21□□□□□ -0.29
Col5a1-201ENSMUST00000028280 Mzb1Q9D8I1 188 aa13.21□□□□□ -0.29
Col5a1-201ENSMUST00000028280 Kcnk5Q9JK62 502 aa13.21□□□□□ -0.29
Col5a1-201ENSMUST00000028280 Syt5Q9R0N5 386 aa13.21□□□□□ -0.29
Col5a1-201ENSMUST00000028280 Gm13178B1AVU7 408 aa13.21□□□□□ -0.29
Col5a1-201ENSMUST00000028280 Olfr319L7MTY4 306 aa13.21□□□□□ -0.29
Col5a1-201ENSMUST00000028280 Tia1P52912 386 aaKnown RBP13.21□□□□□ -0.29
Col5a1-201ENSMUST00000028280 Comtd1Q8BIG7 262 aa13.21□□□□□ -0.29
Col5a1-201ENSMUST00000028280 Aadacl4Q8BM81 407 aa13.21□□□□□ -0.29
Col5a1-201ENSMUST00000028280 Plag1Q9QYE0 499 aa13.21□□□□□ -0.29
Col5a1-201ENSMUST00000028280 Cdh17Q9R100 827 aa13.21□□□□□ -0.29
Col5a1-201ENSMUST00000028280 Olfr588-ps1A0A1B0GSZ2 313 aa13.21□□□□□ -0.29
Col5a1-201ENSMUST00000028280 Hdac3O88895 424 aa13.21□□□□□ -0.29
Col5a1-201ENSMUST00000028280 Adamts19P59509 1210 aa13.21□□□□□ -0.29
Col5a1-201ENSMUST00000028280 Tarbp2P97473 365 aa13.21□□□□□ -0.29
Col5a1-201ENSMUST00000028280 Tbl1xr1Q8BHJ5 514 aa13.21□□□□□ -0.29
Col5a1-201ENSMUST00000028280 Xkr8Q8C0T0 401 aa13.21□□□□□ -0.29
Col5a1-201ENSMUST00000028280 Mbtps2Q8CHX6 515 aa13.21□□□□□ -0.29
Col5a1-201ENSMUST00000028280 Vmn2r105E9Q3A5 860 aa13.21□□□□□ -0.29
Col5a1-201ENSMUST00000028280 Vmn2r124K7N789 855 aa13.21□□□□□ -0.29
Col5a1-201ENSMUST00000028280 Efna3O08545 230 aa13.21□□□□□ -0.29
Col5a1-201ENSMUST00000028280 Enpp1P06802 906 aa13.21□□□□□ -0.29
Col5a1-201ENSMUST00000028280 AdprhP54923 362 aa13.21□□□□□ -0.29
Col5a1-201ENSMUST00000028280 Tdpoz5Q6YCH1 340 aa13.21□□□□□ -0.29
Col5a1-201ENSMUST00000028280 Endod1Q8C522 501 aa13.21□□□□□ -0.29
Col5a1-201ENSMUST00000028280 ArntlQ9WTL8 632 aa13.21□□□□□ -0.29
Col5a1-201ENSMUST00000028280 Cldn7Q9Z261 211 aa13.21□□□□□ -0.29
Col5a1-201ENSMUST00000028280 Atp5j2P56135 88 aaKnown RBP13.21□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Eif4e1bQ3UTA9 244 aa13.21□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Crtac1Q8R555 646 aa13.21□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Or51e2Q8VBV9 320 aa13.21□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Smim3Q99PE5 60 aa13.21□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Kdelr2Q9CQM2 212 aa13.21□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Slc6a19Q9D687 634 aa13.21□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Slc39a5Q9D856 535 aa13.21□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Mrpl39Q9JKF7 336 aa13.21□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Olfr430E9Q5F1 317 aa13.21□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Eif4eP63073 217 aaKnown RBP13.21□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Grxcr1Q50H32 290 aa13.21□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Olfr782Q7TRI2 314 aa13.21□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Synpo2lQ8BWB1 975 aa13.21□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Gsto2Q8K2Q2 248 aa13.21□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Fbxo45Q8K3B1 286 aa13.21□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Etv3Q8R4Z4 513 aa13.21□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Plpp6Q9D4F2 292 aa13.21□□□□□ -0.3
Col5a1-201ENSMUST00000028280 AcoxlQ9DBS4 632 aa13.21□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Ccnl2Q9JJA7 518 aa13.21□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Eif4hQ9WUK2 248 aaKnown RBP13.21□□□□□ -0.3
Col5a1-201ENSMUST00000028280 P2rx3Q3UR32 397 aa13.2□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Prrt3Q6PE13 971 aa13.2□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Camk2dQ6PHZ2 499 aa13.2□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Olfr1134Q7TR43 312 aa13.2□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Gbgt1Q8VI38 347 aa13.2□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Pla1aQ8VI78 456 aa13.2□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Plin3Q9DBG5 437 aa13.2□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Nme4Q9WV84 186 aa13.2□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Zfp735B1ARH2 734 aa13.2□□□□□ -0.3
Col5a1-201ENSMUST00000028280 TspearJ3S6Y1 670 aa13.2□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Agpat1O35083 285 aa13.2□□□□□ -0.3
Col5a1-201ENSMUST00000028280 FurinP23188 793 aa13.2□□□□□ -0.3
Col5a1-201ENSMUST00000028280 GhrhrP32082 423 aa13.2□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Garem2Q6PAJ3 880 aa13.2□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Noxa1Q8CJ00 444 aa13.2□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Cd207Q8VBX4 331 aa13.2□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Olfr1086Q8VFL9 310 aa13.2□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Adarb1Q91ZS8 711 aaKnown RBP13.2□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Glyr1Q922P9 546 aaKnown RBP13.2□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Creb3l4Q9D2A5 370 aa13.2□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Acox3Q9EPL9 700 aa13.2□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Cacna1fQ9JIS7 1985 aa13.2□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Gm4846B2RWH8 538 aa13.2□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Gm21834J3QN05 151 aa13.2□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Atxn1lP0C7T6 687 aa13.2□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Gm10375L7N286 184 aa13.2□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Slc2a1P17809 492 aa13.2□□□□□ -0.3
Col5a1-201ENSMUST00000028280 TshrP47750 764 aa13.2□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Ube2nP61089 152 aaKnown RBP13.2□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Vangl1Q80Z96 526 aa13.2□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Mfsd11Q8BJ51 449 aa13.2□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Olfr883Q8VF64 309 aa13.2□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Cdc42ep3Q9CQC5 254 aa13.2□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Pdzk1ip1Q9CQH0 114 aa13.2□□□□□ -0.3
Col5a1-201ENSMUST00000028280 4933407L21RikQ9D476 131 aa13.2□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Sema4gQ9WUH7 837 aa13.2□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Prps1l3G3UXL2 318 aa13.2□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Srsf5O35326 269 aaKnown RBP13.2□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Hsd17b12O70503 312 aa13.2□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Gabrr1P56475 480 aa13.2□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Tas2r135Q7TQA9 312 aa13.2□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Sipa1l2Q80TE4 1722 aa13.2□□□□□ -0.3
Col5a1-201ENSMUST00000028280 EogtQ8BYW9 527 aa13.2□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Sit1Q8C503 180 aa13.2□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Ndufv2Q9D6J6 248 aa13.2□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Prps1Q9D7G0 318 aa13.2□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Bet1O35623 118 aa13.2□□□□□ -0.3
Col5a1-201ENSMUST00000028280 ChadO55226 358 aa13.2□□□□□ -0.3
Col5a1-201ENSMUST00000028280 Nxt2Q3UNA4 142 aa13.2□□□□□ -0.3
Retrieved 100 of 22,080 RNA–protein pairs in 77.4 ms