RNA–Protein interactions for RNA: ENST00000642137.1

LINC00339-213, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 222 nt, Biotype transcribed processed pseudogene, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-213ENST00000642137 RYKP34925 604 aa11.19□□□□□ -0.62
LINC00339-213ENST00000642137 IDH2P48735 452 aaKnown RBP11.19□□□□□ -0.62
LINC00339-213ENST00000642137 KLRB1Q12918 225 aa11.19□□□□□ -0.62
LINC00339-213ENST00000642137 SLC10A1Q14973 349 aa11.19□□□□□ -0.62
LINC00339-213ENST00000642137 OR1Q1Q15612 314 aa11.19□□□□□ -0.62
LINC00339-213ENST00000642137 NPTX1Q15818 432 aa11.19□□□□□ -0.62
LINC00339-213ENST00000642137 NADK2Q4G0N4 442 aa11.19□□□□□ -0.62
LINC00339-213ENST00000642137 IQCCQ4KMZ1 466 aa11.19□□□□□ -0.62
LINC00339-213ENST00000642137 SLC25A53Q5H9E4 307 aa11.19□□□□□ -0.62
LINC00339-213ENST00000642137 WBP2NLQ6ICG8 309 aa11.19□□□□□ -0.62
LINC00339-213ENST00000642137 PCSK4Q6UW60 755 aa11.19□□□□□ -0.62
LINC00339-213ENST00000642137 TSEN54Q7Z6J9 526 aaKnown RBP11.19□□□□□ -0.62
LINC00339-213ENST00000642137 RBM45Q8IUH3 476 aaKnown RBP11.19□□□□□ -0.62
LINC00339-213ENST00000642137 TMEM251Q8N6I4 163 aa11.19□□□□□ -0.62
LINC00339-213ENST00000642137 LSM14AQ8ND56 463 aaKnown RBP11.19□□□□□ -0.62
LINC00339-213ENST00000642137 ZNF563Q8TA94 476 aa11.19□□□□□ -0.62
LINC00339-213ENST00000642137 PHF10Q8WUB8 498 aaKnown RBP11.19□□□□□ -0.62
LINC00339-213ENST00000642137 ST8SIA1Q92185 356 aa11.19□□□□□ -0.62
LINC00339-213ENST00000642137 NR4A3Q92570 626 aa11.19□□□□□ -0.62
LINC00339-213ENST00000642137 ADAM19Q9H013 955 aa11.19□□□□□ -0.62
LINC00339-213ENST00000642137 ACER3Q9NUN7 267 aa11.19□□□□□ -0.62
LINC00339-213ENST00000642137 TAS2R10Q9NYW0 307 aa11.19□□□□□ -0.62
LINC00339-213ENST00000642137 HRH3Q9Y5N1 445 aa11.19□□□□□ -0.62
LINC00339-213ENST00000642137 ENPP4Q9Y6X5 453 aa11.19□□□□□ -0.62
LINC00339-213ENST00000642137 TPRP12270 2363 aaKnown RBP11.19□□□□□ -0.62
LINC00339-213ENST00000642137 ACACBO00763 2458 aa11.18□□□□□ -0.62
LINC00339-213ENST00000642137 CRYABP02511 175 aaKnown RBP11.18□□□□□ -0.62
LINC00339-213ENST00000642137 FABP3P05413 133 aa11.18□□□□□ -0.62
LINC00339-213ENST00000642137 HPNP05981 417 aa11.18□□□□□ -0.62
LINC00339-213ENST00000642137 GP1BBP13224 206 aa11.18□□□□□ -0.62
LINC00339-213ENST00000642137 RHCEP18577 417 aa11.18□□□□□ -0.62
LINC00339-213ENST00000642137 HK1P19367 917 aa11.18□□□□□ -0.62
LINC00339-213ENST00000642137 GDF1P27539 372 aa11.18□□□□□ -0.62
LINC00339-213ENST00000642137 ADH6P28332 368 aa11.18□□□□□ -0.62
LINC00339-213ENST00000642137 IFNA8P32881 189 aa11.18□□□□□ -0.62
LINC00339-213ENST00000642137 SLC1A3P43003 542 aa11.18□□□□□ -0.62
LINC00339-213ENST00000642137 MAGEA2P43356 314 aa11.18□□□□□ -0.62
LINC00339-213ENST00000642137 CCR4P51679 360 aa11.18□□□□□ -0.62
LINC00339-213ENST00000642137 ZNF41P51814 821 aaPredicted RBP11.18□□□□□ -0.62
LINC00339-213ENST00000642137 SESN3P58005 492 aa11.18□□□□□ -0.62
LINC00339-213ENST00000642137 PPIAP62937 165 aaKnown RBP11.18□□□□□ -0.62
LINC00339-213ENST00000642137 VLDLRP98155 873 aa11.18□□□□□ -0.62
LINC00339-213ENST00000642137 HOXC5Q00444 222 aa11.18□□□□□ -0.62
LINC00339-213ENST00000642137 LY6DQ14210 128 aa11.18□□□□□ -0.62
LINC00339-213ENST00000642137 QPRTQ15274 297 aa11.18□□□□□ -0.62
LINC00339-213ENST00000642137 TOMM34Q15785 309 aaPredicted RBP11.18□□□□□ -0.62
LINC00339-213ENST00000642137 ENTPD8Q5MY95 495 aa11.18□□□□□ -0.62
LINC00339-213ENST00000642137 ZNF613Q6PF04 617 aa11.18□□□□□ -0.62
LINC00339-213ENST00000642137 ARSKQ6UWY0 536 aa11.18□□□□□ -0.62
LINC00339-213ENST00000642137 ZDHHC21Q8IVQ6 265 aa11.18□□□□□ -0.62
LINC00339-213ENST00000642137 ZBTB8AQ96BR9 441 aa11.18□□□□□ -0.62
LINC00339-213ENST00000642137 RSRC1Q96IZ7 334 aaKnown RBP11.18□□□□□ -0.62
LINC00339-213ENST00000642137 ZNF300Q96RE9 604 aaPredicted RBP11.18□□□□□ -0.62
LINC00339-213ENST00000642137 UBL7Q96S82 380 aaPredicted RBP11.18□□□□□ -0.62
LINC00339-213ENST00000642137 ZNF347Q96SE7 839 aa11.18□□□□□ -0.62
LINC00339-213ENST00000642137 KLHDC3Q9BQ90 382 aa11.18□□□□□ -0.62
LINC00339-213ENST00000642137 PRR14Q9BWN1 585 aa11.18□□□□□ -0.62
LINC00339-213ENST00000642137 CHID1Q9BWS9 393 aa11.18□□□□□ -0.62
LINC00339-213ENST00000642137 OR2B2Q9GZK3 357 aa11.18□□□□□ -0.62
LINC00339-213ENST00000642137 YY1AP1Q9H869 796 aa11.18□□□□□ -0.62
LINC00339-213ENST00000642137 ACKR4Q9NPB9 350 aa11.18□□□□□ -0.62
LINC00339-213ENST00000642137 MED17Q9NVC6 651 aa11.18□□□□□ -0.62
LINC00339-213ENST00000642137 ARMC1Q9NVT9 282 aa11.18□□□□□ -0.62
LINC00339-213ENST00000642137 NDUFAF4Q9P032 175 aa11.18□□□□□ -0.62
LINC00339-213ENST00000642137 AURKCQ9UQB9 309 aa11.18□□□□□ -0.62
LINC00339-213ENST00000642137 FAM32AQ9Y421 112 aaKnown RBP11.18□□□□□ -0.62
LINC00339-213ENST00000642137 V9GYQ6 96 aa11.18□□□□□ -0.62
LINC00339-213ENST00000642137 FREM3P0C091 2139 aa11.18□□□□□ -0.62
LINC00339-213ENST00000642137 NCKAP5O14513 1909 aa11.17□□□□□ -0.62
LINC00339-213ENST00000642137 GMFGO60234 142 aa11.17□□□□□ -0.62
LINC00339-213ENST00000642137 CDC40O60508 579 aaKnown RBP eCLIP11.17□□□□□ -0.62
LINC00339-213ENST00000642137 SEMA7AO75326 666 aa11.17□□□□□ -0.62
LINC00339-213ENST00000642137 TRAPPC6AO75865 159 aa11.17□□□□□ -0.62
LINC00339-213ENST00000642137 OR5F1O95221 314 aa11.17□□□□□ -0.62
LINC00339-213ENST00000642137 NTN1O95631 604 aa11.17□□□□□ -0.62
LINC00339-213ENST00000642137 PRKCAP17252 672 aa11.17□□□□□ -0.62
LINC00339-213ENST00000642137 HTR2AP28223 471 aa11.17□□□□□ -0.62
LINC00339-213ENST00000642137 RFC3P40938 356 aa11.17□□□□□ -0.62
LINC00339-213ENST00000642137 APOBEC1P41238 236 aaKnown RBP11.17□□□□□ -0.62
LINC00339-213ENST00000642137 EIF1P41567 113 aaKnown RBP11.17□□□□□ -0.62
LINC00339-213ENST00000642137 MAGEA5P43359 124 aa11.17□□□□□ -0.62
LINC00339-213ENST00000642137 HTR3AP46098 478 aa11.17□□□□□ -0.62
LINC00339-213ENST00000642137 ALDH6A1Q02252 535 aaKnown RBP11.17□□□□□ -0.62
LINC00339-213ENST00000642137 TMEM44Q2T9K0 475 aa11.17□□□□□ -0.62
LINC00339-213ENST00000642137 PLPPR5Q32ZL2 321 aa11.17□□□□□ -0.62
LINC00339-213ENST00000642137 RNFT1Q5M7Z0 435 aa11.17□□□□□ -0.62
LINC00339-213ENST00000642137 ZFP1Q6P2D0 407 aa11.17□□□□□ -0.62
LINC00339-213ENST00000642137 ULK3Q6PHR2 472 aa11.17□□□□□ -0.62
LINC00339-213ENST00000642137 DEF8Q6ZN54 512 aa11.17□□□□□ -0.62
LINC00339-213ENST00000642137 GRINAQ7Z429 371 aa11.17□□□□□ -0.62
LINC00339-213ENST00000642137 CYP4Z1Q86W10 505 aa11.17□□□□□ -0.62
LINC00339-213ENST00000642137 FAM109AQ8N4B1 249 aa11.17□□□□□ -0.62
LINC00339-213ENST00000642137 Q8NA96 180 aa11.17□□□□□ -0.62
LINC00339-213ENST00000642137 FAM83FQ8NEG4 500 aaPredicted RBP11.17□□□□□ -0.62
LINC00339-213ENST00000642137 ADAMTS16Q8TE57 1224 aa11.17□□□□□ -0.62
LINC00339-213ENST00000642137 DNAJA4Q8WW22 397 aaPredicted RBP11.17□□□□□ -0.62
LINC00339-213ENST00000642137 SLC39A7Q92504 469 aa11.17□□□□□ -0.62
LINC00339-213ENST00000642137 SLCO4A1Q96BD0 722 aa11.17□□□□□ -0.62
LINC00339-213ENST00000642137 ZNF524Q96C55 264 aa11.17□□□□□ -0.62
LINC00339-213ENST00000642137 MRGPRX4Q96LA9 322 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms