RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, human

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-231	ENST00000641939	COX20	Q5RI15	118 aa		13.5	□□□□□ -0.25
PHGDH-231	ENST00000641939	C6orf10	Q5SRN2	563 aa		13.5	□□□□□ -0.25
PHGDH-231	ENST00000641939	LUZP2	Q86TE4	346 aa		13.5	□□□□□ -0.25
PHGDH-231	ENST00000641939	LURAP1L	Q8IV03	231 aa		13.5	□□□□□ -0.25
PHGDH-231	ENST00000641939	ANKFN1	Q8N957	763 aa		13.5	□□□□□ -0.25
PHGDH-231	ENST00000641939	CNEP1R1	Q8N9A8	125 aa		13.5	□□□□□ -0.25
PHGDH-231	ENST00000641939	ZG16B	Q96DA0	208 aa		13.5	□□□□□ -0.25
PHGDH-231	ENST00000641939	STARD4	Q96DR4	205 aa		13.5	□□□□□ -0.25
PHGDH-231	ENST00000641939	MRGPRX4	Q96LA9	322 aa		13.5	□□□□□ -0.25
PHGDH-231	ENST00000641939	THUMPD3	Q9BV44	507 aa	Known RBP	13.5	□□□□□ -0.25
PHGDH-231	ENST00000641939	RBM24	Q9BX46	236 aa	Known RBP	13.5	□□□□□ -0.25
PHGDH-231	ENST00000641939	PRRG4	Q9BZD6	226 aa		13.5	□□□□□ -0.25
PHGDH-231	ENST00000641939	RNF122	Q9H9V4	155 aa		13.5	□□□□□ -0.25
PHGDH-231	ENST00000641939	SLC35A3	Q9Y2D2	325 aa		13.5	□□□□□ -0.25
PHGDH-231	ENST00000641939		A0A0J9YW62	118 aa		13.49	□□□□□ -0.25
PHGDH-231	ENST00000641939	GJE1	A6NN92	205 aa		13.49	□□□□□ -0.25
PHGDH-231	ENST00000641939	ETV2	O00321	342 aa	Predicted RBP	13.49	□□□□□ -0.25
PHGDH-231	ENST00000641939	TNFSF11	O14788	317 aa		13.49	□□□□□ -0.25
PHGDH-231	ENST00000641939	MSTN	O14793	375 aa		13.49	□□□□□ -0.25
PHGDH-231	ENST00000641939	EFNA2	O43921	213 aa		13.49	□□□□□ -0.25
PHGDH-231	ENST00000641939	CXCL13	O43927	109 aa		13.49	□□□□□ -0.25
PHGDH-231	ENST00000641939	DNAJA2	O60884	412 aa		13.49	□□□□□ -0.25
PHGDH-231	ENST00000641939	CYP7B1	O75881	506 aa		13.49	□□□□□ -0.25
PHGDH-231	ENST00000641939	AQP8	O94778	261 aa		13.49	□□□□□ -0.25
PHGDH-231	ENST00000641939	NTN1	O95631	604 aa		13.49	□□□□□ -0.25
PHGDH-231	ENST00000641939	NR2F1	P10589	423 aa		13.49	□□□□□ -0.25
PHGDH-231	ENST00000641939	CAPN3	P20807	821 aa		13.49	□□□□□ -0.25
PHGDH-231	ENST00000641939	SFTPD	P35247	375 aa		13.49	□□□□□ -0.25
PHGDH-231	ENST00000641939	KIR2DL2	P43627	348 aa	Predicted RBP	13.49	□□□□□ -0.25
PHGDH-231	ENST00000641939	KRTAP10-9	P60411	292 aa		13.49	□□□□□ -0.25
PHGDH-231	ENST00000641939	SORD	Q00796	357 aa		13.49	□□□□□ -0.25
PHGDH-231	ENST00000641939	QPRT	Q15274	297 aa		13.49	□□□□□ -0.25
PHGDH-231	ENST00000641939	SLC25A53	Q5H9E4	307 aa		13.49	□□□□□ -0.25
PHGDH-231	ENST00000641939	HBM	Q6B0K9	141 aa		13.49	□□□□□ -0.25
PHGDH-231	ENST00000641939	PPP4R4	Q6NUP7	873 aa		13.49	□□□□□ -0.25
PHGDH-231	ENST00000641939	VWA1	Q6PCB0	445 aa		13.49	□□□□□ -0.25
PHGDH-231	ENST00000641939	LRRC74B	Q6ZQY2	392 aa		13.49	□□□□□ -0.25
PHGDH-231	ENST00000641939	ZZZ3	Q8IYH5	903 aa		13.49	□□□□□ -0.25
PHGDH-231	ENST00000641939	FAM71C	Q8NEG0	241 aa		13.49	□□□□□ -0.25
PHGDH-231	ENST00000641939	ZNF524	Q96C55	264 aa		13.49	□□□□□ -0.25
PHGDH-231	ENST00000641939	KLHL15	Q96M94	604 aa		13.49	□□□□□ -0.25
PHGDH-231	ENST00000641939	QRSL1	Q9H0R6	528 aa	Known RBP	13.49	□□□□□ -0.25
PHGDH-231	ENST00000641939	SLC38A1	Q9H2H9	487 aa		13.49	□□□□□ -0.25
PHGDH-231	ENST00000641939	TPT1P8	Q9HAU6	139 aa		13.49	□□□□□ -0.25
PHGDH-231	ENST00000641939	ST6GALNAC1	Q9NSC7	600 aa	Predicted RBP	13.49	□□□□□ -0.25
PHGDH-231	ENST00000641939	CRIM1	Q9NZV1	1036 aa		13.49	□□□□□ -0.25
PHGDH-231	ENST00000641939	MCTS1	Q9ULC4	181 aa	Known RBP	13.49	□□□□□ -0.25
PHGDH-231	ENST00000641939		A8MXE2	369 aa		13.48	□□□□□ -0.25
PHGDH-231	ENST00000641939	SMNDC1	O75940	238 aa	Known RBP eCLIP	13.48	□□□□□ -0.25
PHGDH-231	ENST00000641939	SYNGR4	O95473	234 aa		13.48	□□□□□ -0.25
PHGDH-231	ENST00000641939	CHRM4	P08173	479 aa		13.48	□□□□□ -0.25
PHGDH-231	ENST00000641939	PGC	P20142	388 aa		13.48	□□□□□ -0.25
PHGDH-231	ENST00000641939	SHC1	P29353	583 aa		13.48	□□□□□ -0.25
PHGDH-231	ENST00000641939	PGM1	P36871	562 aa		13.48	□□□□□ -0.25
PHGDH-231	ENST00000641939	CRAT	P43155	626 aa		13.48	□□□□□ -0.25
PHGDH-231	ENST00000641939	ATP4B	P51164	291 aa		13.48	□□□□□ -0.25
PHGDH-231	ENST00000641939	MVD	P53602	400 aa		13.48	□□□□□ -0.25
PHGDH-231	ENST00000641939	CARD18	P57730	90 aa		13.48	□□□□□ -0.25
PHGDH-231	ENST00000641939	SIRPA	P78324	504 aa		13.48	□□□□□ -0.25
PHGDH-231	ENST00000641939	IRX1	P78414	480 aa	Predicted RBP	13.48	□□□□□ -0.25
PHGDH-231	ENST00000641939	KCNJ10	P78508	379 aa		13.48	□□□□□ -0.25
PHGDH-231	ENST00000641939	SELENBP1	Q13228	472 aa		13.48	□□□□□ -0.25
PHGDH-231	ENST00000641939	GTDC1	Q4AE62	458 aa		13.48	□□□□□ -0.25
PHGDH-231	ENST00000641939	BLOC1S3	Q6QNY0	202 aa		13.48	□□□□□ -0.25
PHGDH-231	ENST00000641939	BTLA	Q7Z6A9	289 aa		13.48	□□□□□ -0.25
PHGDH-231	ENST00000641939	HMGN2P46	Q86SG4	172 aa		13.48	□□□□□ -0.25
PHGDH-231	ENST00000641939	FUNDC1	Q8IVP5	155 aa		13.48	□□□□□ -0.25
PHGDH-231	ENST00000641939	FAM222B	Q8WU58	562 aa		13.48	□□□□□ -0.25
PHGDH-231	ENST00000641939	STON2	Q8WXE9	905 aa		13.48	□□□□□ -0.25
PHGDH-231	ENST00000641939	TMEM234	Q8WY98	164 aa		13.48	□□□□□ -0.25
PHGDH-231	ENST00000641939	ST8SIA1	Q92185	356 aa		13.48	□□□□□ -0.25
PHGDH-231	ENST00000641939	GTF2H4	Q92759	462 aa		13.48	□□□□□ -0.25
PHGDH-231	ENST00000641939	PMM1	Q92871	262 aa		13.48	□□□□□ -0.25
PHGDH-231	ENST00000641939	OSTF1	Q92882	214 aa		13.48	□□□□□ -0.25
PHGDH-231	ENST00000641939	AURKB	Q96GD4	344 aa	Predicted RBP	13.48	□□□□□ -0.25
PHGDH-231	ENST00000641939	MTHFD2L	Q9H903	347 aa	Predicted RBP	13.48	□□□□□ -0.25
PHGDH-231	ENST00000641939	TIGAR	Q9NQ88	270 aa		13.48	□□□□□ -0.25
PHGDH-231	ENST00000641939	GALNT8	Q9NY28	637 aa		13.48	□□□□□ -0.25
PHGDH-231	ENST00000641939	P2RX2	Q9UBL9	471 aa		13.48	□□□□□ -0.25
PHGDH-231	ENST00000641939	PCDHB14	Q9Y5E9	798 aa		13.48	□□□□□ -0.25
PHGDH-231	ENST00000641939	FREM1	Q5H8C1	2179 aa		13.48	□□□□□ -0.25
PHGDH-231	ENST00000641939	HRNR	Q86YZ3	2850 aa	Predicted RBP	13.47	□□□□□ -0.25
PHGDH-231	ENST00000641939	TUBAL3	A6NHL2	446 aa		13.47	□□□□□ -0.25
PHGDH-231	ENST00000641939	AGAP5	A6NIR3	686 aa		13.47	□□□□□ -0.25
PHGDH-231	ENST00000641939	EDF1	O60869	148 aa	Known RBP	13.47	□□□□□ -0.25
PHGDH-231	ENST00000641939	BCAS1	O75363	584 aa	Predicted RBP	13.47	□□□□□ -0.25
PHGDH-231	ENST00000641939	ETFA	P13804	333 aa		13.47	□□□□□ -0.25
PHGDH-231	ENST00000641939	SLC6A8	P48029	635 aa		13.47	□□□□□ -0.25
PHGDH-231	ENST00000641939	SESN3	P58005	492 aa		13.47	□□□□□ -0.25
PHGDH-231	ENST00000641939	GUSBP1	Q15486	140 aa		13.47	□□□□□ -0.25
PHGDH-231	ENST00000641939	TMEM176B	Q3YBM2	270 aa	Predicted RBP	13.47	□□□□□ -0.25
PHGDH-231	ENST00000641939	SLC2A7	Q6PXP3	512 aa		13.47	□□□□□ -0.25
PHGDH-231	ENST00000641939	FAM214B	Q7L5A3	538 aa		13.47	□□□□□ -0.25
PHGDH-231	ENST00000641939	TMEM200A	Q86VY9	491 aa		13.47	□□□□□ -0.25
PHGDH-231	ENST00000641939	CMIP	Q8IY22	773 aa		13.47	□□□□□ -0.25
PHGDH-231	ENST00000641939	SPDL1	Q96EA4	605 aa		13.47	□□□□□ -0.25
PHGDH-231	ENST00000641939	THOC1	Q96FV9	657 aa	Known RBP	13.47	□□□□□ -0.25
PHGDH-231	ENST00000641939	PAIP1	Q9H074	479 aa	Known RBP	13.47	□□□□□ -0.25
PHGDH-231	ENST00000641939	EXOSC3	Q9NQT5	275 aa	Known RBP	13.47	□□□□□ -0.25
PHGDH-231	ENST00000641939	ACER3	Q9NUN7	267 aa		13.47	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms