RNA–Protein interactions for RNA: ENST00000641711.1

PHGDH-224, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 712 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-224ENST00000641711 MAT2BQ9NZL9 334 aa9.46□□□□□ -0.9
PHGDH-224ENST00000641711 WARS2Q9UGM6 360 aaKnown RBP9.46□□□□□ -0.9
PHGDH-224ENST00000641711 PPIEQ9UNP9 301 aaKnown RBP9.46□□□□□ -0.9
PHGDH-224ENST00000641711 PCDHGA9Q9Y5G4 932 aaKnown RBP9.46□□□□□ -0.9
PHGDH-224ENST00000641711 KCNMB2Q9Y691 235 aa9.46□□□□□ -0.9
PHGDH-224ENST00000641711 ZFYVE26Q68DK2 2539 aa9.46□□□□□ -0.9
PHGDH-224ENST00000641711 AGAP5A6NIR3 686 aa9.45□□□□□ -0.9
PHGDH-224ENST00000641711 SAGE2PA6NJ88 616 aa9.45□□□□□ -0.9
PHGDH-224ENST00000641711 CLDN24A6NM45 220 aa9.45□□□□□ -0.9
PHGDH-224ENST00000641711 ERVH48-1M5A8F1 160 aa9.45□□□□□ -0.9
PHGDH-224ENST00000641711 SLC22A1O15245 554 aa9.45□□□□□ -0.9
PHGDH-224ENST00000641711 ZZEF1O43149 2961 aa9.45□□□□□ -0.9
PHGDH-224ENST00000641711 CYP7B1O75881 506 aa9.45□□□□□ -0.9
PHGDH-224ENST00000641711 OR5F1O95221 314 aa9.45□□□□□ -0.9
PHGDH-224ENST00000641711 FADS2O95864 444 aaKnown RBP9.45□□□□□ -0.9
PHGDH-224ENST00000641711 BCL10O95999 233 aa9.45□□□□□ -0.9
PHGDH-224ENST00000641711 ALOX5P09917 674 aa9.45□□□□□ -0.9
PHGDH-224ENST00000641711 PRKAR1AP10644 381 aa9.45□□□□□ -0.9
PHGDH-224ENST00000641711 SFTPCP11686 197 aa9.45□□□□□ -0.9
PHGDH-224ENST00000641711 IFNA8P32881 189 aa9.45□□□□□ -0.9
PHGDH-224ENST00000641711 STT3AP46977 705 aa9.45□□□□□ -0.9
PHGDH-224ENST00000641711 ST3GAL3Q11203 375 aa9.45□□□□□ -0.9
PHGDH-224ENST00000641711 STX4Q12846 297 aa9.45□□□□□ -0.9
PHGDH-224ENST00000641711 MAP4K2Q12851 820 aa9.45□□□□□ -0.9
PHGDH-224ENST00000641711 AQP6Q13520 282 aa9.45□□□□□ -0.9
PHGDH-224ENST00000641711 DCTN2Q13561 401 aaKnown RBP9.45□□□□□ -0.9
PHGDH-224ENST00000641711 LARS2Q15031 903 aaKnown RBP9.45□□□□□ -0.9
PHGDH-224ENST00000641711 PCOLCEQ15113 449 aa9.45□□□□□ -0.9
PHGDH-224ENST00000641711 OCLNQ16625 522 aa9.45□□□□□ -0.9
PHGDH-224ENST00000641711 TRMT12Q53H54 448 aaKnown RBP9.45□□□□□ -0.9
PHGDH-224ENST00000641711 EIPR1Q53HC9 387 aa9.45□□□□□ -0.9
PHGDH-224ENST00000641711 RNLSQ5VYX0 342 aa9.45□□□□□ -0.9
PHGDH-224ENST00000641711 PLAG1Q6DJT9 500 aa9.45□□□□□ -0.9
PHGDH-224ENST00000641711 PTCHD4Q6ZW05 846 aa9.45□□□□□ -0.9
PHGDH-224ENST00000641711 LAPTM4BQ86VI4 370 aa9.45□□□□□ -0.9
PHGDH-224ENST00000641711 VRK2Q86Y07 508 aa9.45□□□□□ -0.9
PHGDH-224ENST00000641711 PEX5LQ8IYB4 626 aa9.45□□□□□ -0.9
PHGDH-224ENST00000641711 ZNF619Q8N2I2 560 aa9.45□□□□□ -0.9
PHGDH-224ENST00000641711 TMEM52Q8NDY8 209 aa9.45□□□□□ -0.9
PHGDH-224ENST00000641711 OR4K5Q8NGD3 323 aa9.45□□□□□ -0.9
PHGDH-224ENST00000641711 OR8J1Q8NGP2 316 aa9.45□□□□□ -0.9
PHGDH-224ENST00000641711 OR14A16Q8NHC5 309 aa9.45□□□□□ -0.9
PHGDH-224ENST00000641711 TBC1D15Q8TC07 691 aa9.45□□□□□ -0.9
PHGDH-224ENST00000641711 GNPDA2Q8TDQ7 276 aa9.45□□□□□ -0.9
PHGDH-224ENST00000641711 CDS1Q92903 461 aa9.45□□□□□ -0.9
PHGDH-224ENST00000641711 DAZLQ92904 295 aaKnown RBP9.45□□□□□ -0.9
PHGDH-224ENST00000641711 SLC38A4Q969I6 547 aa9.45□□□□□ -0.9
PHGDH-224ENST00000641711 ZG16BQ96DA0 208 aa9.45□□□□□ -0.9
PHGDH-224ENST00000641711 CRELD1Q96HD1 420 aa9.45□□□□□ -0.9
PHGDH-224ENST00000641711 SDF2Q99470 211 aa9.45□□□□□ -0.9
PHGDH-224ENST00000641711 CDCA4Q9BXL8 241 aa9.45□□□□□ -0.9
PHGDH-224ENST00000641711 RBCK1Q9BYM8 510 aa9.45□□□□□ -0.9
PHGDH-224ENST00000641711 QRSL1Q9H0R6 528 aaKnown RBP9.45□□□□□ -0.9
PHGDH-224ENST00000641711 ANKRA2Q9H9E1 313 aa9.45□□□□□ -0.9
PHGDH-224ENST00000641711 CACYBPQ9HB71 228 aaKnown RBP9.45□□□□□ -0.9
PHGDH-224ENST00000641711 SLC25A19Q9HC21 320 aa9.45□□□□□ -0.9
PHGDH-224ENST00000641711 ATP13A2Q9NQ11 1180 aa9.45□□□□□ -0.9
PHGDH-224ENST00000641711 FBXL4Q9UKA2 621 aa9.45□□□□□ -0.9
PHGDH-224ENST00000641711 ZNF232Q9UNY5 417 aa9.45□□□□□ -0.9
PHGDH-224ENST00000641711 ZNF443Q9Y2A4 671 aaPredicted RBP9.45□□□□□ -0.9
PHGDH-224ENST00000641711 WDR45Q9Y484 360 aa9.45□□□□□ -0.9
PHGDH-224ENST00000641711 CLDN16Q9Y5I7 305 aa9.45□□□□□ -0.9
PHGDH-224ENST00000641711 CPAMD8Q8IZJ3 1885 aa9.45□□□□□ -0.9
PHGDH-224ENST00000641711 A0A087WUU8 490 aa9.44□□□□□ -0.9
PHGDH-224ENST00000641711 MKRN2OSH3BPM6 223 aa9.44□□□□□ -0.9
PHGDH-224ENST00000641711 KIAA0513O60268 411 aa9.44□□□□□ -0.9
PHGDH-224ENST00000641711 FCMRO60667 390 aa9.44□□□□□ -0.9
PHGDH-224ENST00000641711 TPST2O60704 377 aa9.44□□□□□ -0.9
PHGDH-224ENST00000641711 COQ9O75208 318 aa9.44□□□□□ -0.9
PHGDH-224ENST00000641711 STX11O75558 287 aa9.44□□□□□ -0.9
PHGDH-224ENST00000641711 CDC123O75794 336 aaPredicted RBP9.44□□□□□ -0.9
PHGDH-224ENST00000641711 CEACAM4O75871 244 aa9.44□□□□□ -0.9
PHGDH-224ENST00000641711 SERPINA7P05543 415 aa9.44□□□□□ -0.9
PHGDH-224ENST00000641711 DBIP07108 87 aaKnown RBP9.44□□□□□ -0.9
PHGDH-224ENST00000641711 INHBBP09529 407 aa9.44□□□□□ -0.9
PHGDH-224ENST00000641711 ZNF182P17025 639 aaPredicted RBP9.44□□□□□ -0.9
PHGDH-224ENST00000641711 NT5EP21589 574 aa9.44□□□□□ -0.9
PHGDH-224ENST00000641711 PSMB9P28065 219 aa9.44□□□□□ -0.9
PHGDH-224ENST00000641711 TGFBR2P37173 567 aa9.44□□□□□ -0.9
PHGDH-224ENST00000641711 GSSP48637 474 aa9.44□□□□□ -0.9
PHGDH-224ENST00000641711 EFNA3P52797 238 aa9.44□□□□□ -0.9
PHGDH-224ENST00000641711 TAS2R41P59536 307 aa9.44□□□□□ -0.9
PHGDH-224ENST00000641711 EEF1A1P68104 462 aaKnown RBP9.44□□□□□ -0.9
PHGDH-224ENST00000641711 EFNB1P98172 346 aa9.44□□□□□ -0.9
PHGDH-224ENST00000641711 CDK5Q00535 292 aa9.44□□□□□ -0.9
PHGDH-224ENST00000641711 ID2Q02363 134 aa9.44□□□□□ -0.9
PHGDH-224ENST00000641711 MOGQ16653 247 aa9.44□□□□□ -0.9
PHGDH-224ENST00000641711 DECR1Q16698 335 aa9.44□□□□□ -0.9
PHGDH-224ENST00000641711 COL28A1Q2UY09 1125 aa9.44□□□□□ -0.9
PHGDH-224ENST00000641711 DEFB109BQ30KR1 87 aa9.44□□□□□ -0.9
PHGDH-224ENST00000641711 MEDAGQ5VYS4 303 aa9.44□□□□□ -0.9
PHGDH-224ENST00000641711 TMEM236Q5W0B7 351 aa9.44□□□□□ -0.9
PHGDH-224ENST00000641711 PAPD4Q6PIY7 484 aaKnown RBP9.44□□□□□ -0.9
PHGDH-224ENST00000641711 SHISA6Q6ZSJ9 500 aa9.44□□□□□ -0.9
PHGDH-224ENST00000641711 P2RY8Q86VZ1 359 aa9.44□□□□□ -0.9
PHGDH-224ENST00000641711 CROCCP3Q8IVE0 287 aa9.44□□□□□ -0.9
PHGDH-224ENST00000641711 CLIP4Q8N3C7 705 aa9.44□□□□□ -0.9
PHGDH-224ENST00000641711 FAM26EQ8N5C1 309 aa9.44□□□□□ -0.9
PHGDH-224ENST00000641711 M1APQ8TC57 530 aa9.44□□□□□ -0.9
PHGDH-224ENST00000641711 SLC9A6Q92581 669 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms