RNA–Protein interactions for RNA: ENST00000641575.1

SCN1A-219, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS ALT1 BASIC

Gene SCN1A, Length 12,874 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-219ENST00000641575 OTX2P32243 289 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 GABRA2P47869 451 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 ACOT2P49753 483 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 DAP3P51398 398 aaKnown RBP2.63□□□□□ -1.99
SCN1A-219ENST00000641575 XKP51811 444 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 DPYSL3Q14195 570 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 KIR2DS5Q14953 304 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 KANK2Q63ZY3 851 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 TMEM107Q6UX40 140 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 TMEM182Q6ZP80 229 aaPredicted RBP2.63□□□□□ -1.99
SCN1A-219ENST00000641575 SLC7A5P1Q8MH63 180 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 SUMF1Q8NBK3 374 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 SPPL3Q8TCT6 385 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 CASTOR1Q8WTX7 329 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 ISOC1Q96CN7 298 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 LY9Q9HBG7 655 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 LUZP4Q9P127 313 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 SLC17A7Q9P2U7 560 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 RALYQ9UKM9 306 aaKnown RBP2.63□□□□□ -1.99
SCN1A-219ENST00000641575 FBXO5Q9UKT4 447 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 KLF13Q9Y2Y9 288 aaPredicted RBP2.63□□□□□ -1.99
SCN1A-219ENST00000641575 PCDHGC4Q9Y5F7 938 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 A0A0B4J293 547 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 CPSF4LA6NMK7 179 aaKnown RBP2.63□□□□□ -1.99
SCN1A-219ENST00000641575 KRBOX1C9JBD0 128 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 CDRT1O95170 752 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 C7P10643 843 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 PF4V1P10720 104 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 LIPAP38571 399 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 PSMD8P48556 350 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 KHKP50053 298 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 HHEXQ03014 270 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 MAMLD1Q13495 774 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 GAS6Q14393 721 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 CLPPQ16740 277 aaPredicted RBP2.63□□□□□ -1.99
SCN1A-219ENST00000641575 SLC22A10Q63ZE4 541 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 PRSS55Q6UWB4 352 aaPredicted RBP2.63□□□□□ -1.99
SCN1A-219ENST00000641575 GAREM2Q75VX8 874 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 SLC26A9Q7LBE3 791 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 SAMD12Q8N8I0 201 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 CNEP1R1Q8N9A8 125 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 ZNF439Q8NDP4 499 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 OR52P1PQ8NH57 321 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 AKR7LQ8NHP1 331 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 MAFAQ8NHW3 353 aaPredicted RBP2.63□□□□□ -1.99
SCN1A-219ENST00000641575 IL17DQ8TAD2 202 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 GPR151Q8TDV0 419 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 SMAP2Q8WU79 429 aaPredicted RBP2.63□□□□□ -1.99
SCN1A-219ENST00000641575 MYADMQ96S97 322 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 HOPXQ9BPY8 73 aaPredicted RBP2.63□□□□□ -1.99
SCN1A-219ENST00000641575 CPEB1Q9BZB8 566 aaKnown RBP2.63□□□□□ -1.99
SCN1A-219ENST00000641575 IL23AQ9NPF7 189 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 RCC2Q9P258 522 aaKnown RBP2.63□□□□□ -1.99
SCN1A-219ENST00000641575 ENPP5Q9UJA9 477 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 A4GNTQ9UNA3 340 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 TIAM2Q8IVF5 1701 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 DAPL1A0PJW8 107 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 TMEM235A6NFC5 223 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 SLC22A31A6NKX4 558 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 TO15178 435 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 PRKCGP05129 697 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 BPGMP07738 259 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 CT45A10P0DMU9 189 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 MGST1P10620 155 aaKnown RBP2.63□□□□□ -1.99
SCN1A-219ENST00000641575 CBLP22681 906 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 MGAT1P26572 445 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 MAOBP27338 520 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 CD34P28906 385 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 CALCRP30988 508 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 ASPAP45381 313 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 STT3AP46977 705 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 LGALS7P47929 136 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 MRPL19P49406 292 aaKnown RBP2.63□□□□□ -1.99
SCN1A-219ENST00000641575 FXYD6P3P58550 94 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 SUMO1P63165 101 aaKnown RBP2.63□□□□□ -1.99
SCN1A-219ENST00000641575 TNK1Q13470 666 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 POU4F3Q15319 338 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 TAZQ16635 292 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 UBE2SQ16763 222 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 HEPHL1Q6MZM0 1159 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 SYT13Q7L8C5 426 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 FAM185AQ8N0U4 392 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 OR6K6Q8NGW6 343 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 FBXO25Q8TCJ0 367 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 ASB13Q8WXK3 278 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 OSTF1Q92882 214 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 TRMT2BQ96GJ1 504 aaKnown RBP2.63□□□□□ -1.99
SCN1A-219ENST00000641575 SYT17Q9BSW7 474 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 CNTNAP3Q9BZ76 1288 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 TWSG1Q9GZX9 223 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 OR51J1Q9H342 316 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 MVB12BQ9H7P6 319 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 FOXD3Q9UJU5 478 aaPredicted RBP2.63□□□□□ -1.99
SCN1A-219ENST00000641575 GLYATL1P3A0A0U1RQE8 302 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 NUPL2O15504 423 aaKnown RBP2.63□□□□□ -1.99
SCN1A-219ENST00000641575 SCO2O43819 266 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 SC5DO75845 299 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 BPIP17213 487 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 NTSR1P30989 418 aa2.63□□□□□ -1.99
SCN1A-219ENST00000641575 NPBWR1P48145 328 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms