RNA–Protein interactions for RNA: ENST00000641371.1

PHGDH-215, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 725 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-215ENST00000641371 NKAIN4Q8IVV8 208 aa8.93□□□□□ -0.98
PHGDH-215ENST00000641371 SPARTQ8N0X7 666 aa8.93□□□□□ -0.98
PHGDH-215ENST00000641371 SHISA5Q8N114 240 aa8.93□□□□□ -0.98
PHGDH-215ENST00000641371 ESX1Q8N693 406 aa8.93□□□□□ -0.98
PHGDH-215ENST00000641371 POGLUT1Q8NBL1 392 aa8.93□□□□□ -0.98
PHGDH-215ENST00000641371 APCDD1LQ8NCL9 501 aa8.93□□□□□ -0.98
PHGDH-215ENST00000641371 OR4C3Q8NH37 302 aa8.93□□□□□ -0.98
PHGDH-215ENST00000641371 OR5W2Q8NH69 310 aa8.93□□□□□ -0.98
PHGDH-215ENST00000641371 TMEM234Q8WY98 164 aa8.93□□□□□ -0.98
PHGDH-215ENST00000641371 RORBQ92753 470 aa8.93□□□□□ -0.98
PHGDH-215ENST00000641371 EFHD2Q96C19 240 aaPredicted RBP8.93□□□□□ -0.98
PHGDH-215ENST00000641371 BPIFA2Q96DR5 249 aa8.93□□□□□ -0.98
PHGDH-215ENST00000641371 ARSGQ96EG1 525 aa8.93□□□□□ -0.98
PHGDH-215ENST00000641371 DTNBP1Q96EV8 351 aa8.93□□□□□ -0.98
PHGDH-215ENST00000641371 FAM46AQ96IP4 442 aaKnown RBP8.93□□□□□ -0.98
PHGDH-215ENST00000641371 PLEKHA8Q96JA3 519 aa8.93□□□□□ -0.98
PHGDH-215ENST00000641371 ADOQ96SZ5 270 aa8.93□□□□□ -0.98
PHGDH-215ENST00000641371 SECISBP2Q96T21 854 aaKnown RBP8.93□□□□□ -0.98
PHGDH-215ENST00000641371 COPS4Q9BT78 406 aa8.93□□□□□ -0.98
PHGDH-215ENST00000641371 ZNF700Q9H0M5 742 aa8.93□□□□□ -0.98
PHGDH-215ENST00000641371 MMP25Q9NPA2 562 aa8.93□□□□□ -0.98
PHGDH-215ENST00000641371 CTPS2Q9NRF8 586 aa8.93□□□□□ -0.98
PHGDH-215ENST00000641371 FKBP14Q9NWM8 211 aa8.93□□□□□ -0.98
PHGDH-215ENST00000641371 PSORS1C1Q9UIG5 152 aa8.93□□□□□ -0.98
PHGDH-215ENST00000641371 ZNF223Q9UK11 482 aaPredicted RBP8.93□□□□□ -0.98
PHGDH-215ENST00000641371 ICAM5Q9UMF0 924 aa8.93□□□□□ -0.98
PHGDH-215ENST00000641371 NPFFR2Q9Y5X5 522 aa8.93□□□□□ -0.98
PHGDH-215ENST00000641371 COMMD3-BMI1R4GMX3 469 aa8.93□□□□□ -0.98
PHGDH-215ENST00000641371 TRBV11-1A0A0K0K1C0 115 aa8.92□□□□□ -0.98
PHGDH-215ENST00000641371 FAM86C2PA6NEL3 165 aa8.92□□□□□ -0.98
PHGDH-215ENST00000641371 CCDC160A6NGH7 325 aa8.92□□□□□ -0.98
PHGDH-215ENST00000641371 EFCAB9A8MZ26 197 aa8.92□□□□□ -0.98
PHGDH-215ENST00000641371 C21orf140B9A014 251 aa8.92□□□□□ -0.98
PHGDH-215ENST00000641371 PTGES3LE9PB15 166 aa8.92□□□□□ -0.98
PHGDH-215ENST00000641371 PLD2O14939 933 aa8.92□□□□□ -0.98
PHGDH-215ENST00000641371 STK17BO94768 372 aa8.92□□□□□ -0.98
PHGDH-215ENST00000641371 LYPD3O95274 346 aa8.92□□□□□ -0.98
PHGDH-215ENST00000641371 DLGAP3O95886 979 aa8.92□□□□□ -0.98
PHGDH-215ENST00000641371 MT-CO3P00414 261 aa8.92□□□□□ -0.98
PHGDH-215ENST00000641371 THY1P04216 161 aa8.92□□□□□ -0.98
PHGDH-215ENST00000641371 CDK1P06493 297 aa8.92□□□□□ -0.98
PHGDH-215ENST00000641371 CCL4P13236 92 aa8.92□□□□□ -0.98
PHGDH-215ENST00000641371 IFI30P13284 250 aa8.92□□□□□ -0.98
PHGDH-215ENST00000641371 PRG2P13727 222 aa8.92□□□□□ -0.98
PHGDH-215ENST00000641371 CD82P27701 267 aa8.92□□□□□ -0.98
PHGDH-215ENST00000641371 FMO3P31513 532 aa8.92□□□□□ -0.98
PHGDH-215ENST00000641371 SLC6A6P31641 620 aa8.92□□□□□ -0.98
PHGDH-215ENST00000641371 EVI2BP34910 448 aa8.92□□□□□ -0.98
PHGDH-215ENST00000641371 SLC1A3P43003 542 aa8.92□□□□□ -0.98
PHGDH-215ENST00000641371 ST13P50502 369 aaKnown RBP8.92□□□□□ -0.98
PHGDH-215ENST00000641371 P2RX1P51575 399 aa8.92□□□□□ -0.98
PHGDH-215ENST00000641371 EFNA3P52797 238 aa8.92□□□□□ -0.98
PHGDH-215ENST00000641371 CDH15P55291 814 aa8.92□□□□□ -0.98
PHGDH-215ENST00000641371 RPS15P62841 145 aaKnown RBP8.92□□□□□ -0.98
PHGDH-215ENST00000641371 C17orf67Q0P5P2 114 aa8.92□□□□□ -0.98
PHGDH-215ENST00000641371 SF3A2Q15428 464 aaKnown RBP8.92□□□□□ -0.98
PHGDH-215ENST00000641371 SNAPC1Q16533 368 aa8.92□□□□□ -0.98
PHGDH-215ENST00000641371 KLHL22Q53GT1 634 aa8.92□□□□□ -0.98
PHGDH-215ENST00000641371 LAIR2Q6ISS4 152 aa8.92□□□□□ -0.98
PHGDH-215ENST00000641371 TMEM81Q6P7N7 255 aa8.92□□□□□ -0.98
PHGDH-215ENST00000641371 RTL4Q6ZR62 310 aa8.92□□□□□ -0.98
PHGDH-215ENST00000641371 CCDC71Q8IV32 467 aaPredicted RBP8.92□□□□□ -0.98
PHGDH-215ENST00000641371 GID4Q8IVV7 300 aa8.92□□□□□ -0.98
PHGDH-215ENST00000641371 STX19Q8N4C7 294 aa8.92□□□□□ -0.98
PHGDH-215ENST00000641371 TMCO5AQ8N6Q1 288 aa8.92□□□□□ -0.98
PHGDH-215ENST00000641371 ZNF321PQ8N8H1 164 aa8.92□□□□□ -0.98
PHGDH-215ENST00000641371 RNF217Q8TC41 542 aa8.92□□□□□ -0.98
PHGDH-215ENST00000641371 FANK1Q8TC84 345 aa8.92□□□□□ -0.98
PHGDH-215ENST00000641371 TMEM255BQ8WV15 326 aa8.92□□□□□ -0.98
PHGDH-215ENST00000641371 APH1BQ8WW43 257 aa8.92□□□□□ -0.98
PHGDH-215ENST00000641371 LIPHQ8WWY8 451 aa8.92□□□□□ -0.98
PHGDH-215ENST00000641371 SGTBQ96EQ0 304 aa8.92□□□□□ -0.98
PHGDH-215ENST00000641371 IP6K3Q96PC2 410 aa8.92□□□□□ -0.98
PHGDH-215ENST00000641371 WDR77Q9BQA1 342 aaPredicted RBP8.92□□□□□ -0.98
PHGDH-215ENST00000641371 GPR87Q9BY21 358 aa8.92□□□□□ -0.98
PHGDH-215ENST00000641371 DEFB126Q9BYW3 111 aa8.92□□□□□ -0.98
PHGDH-215ENST00000641371 CCDC90BQ9GZT6 254 aa8.92□□□□□ -0.98
PHGDH-215ENST00000641371 RBM38Q9H0Z9 239 aaKnown RBP8.92□□□□□ -0.98
PHGDH-215ENST00000641371 C11orf16Q9NQ32 467 aa8.92□□□□□ -0.98
PHGDH-215ENST00000641371 RASSF1Q9NS23 344 aa8.92□□□□□ -0.98
PHGDH-215ENST00000641371 ZNF226Q9NYT6 803 aa8.92□□□□□ -0.98
PHGDH-215ENST00000641371 RSL24D1Q9UHA3 163 aaKnown RBP8.92□□□□□ -0.98
PHGDH-215ENST00000641371 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.92□□□□□ -0.98
PHGDH-215ENST00000641371 PTRH2Q9Y3E5 179 aaKnown RBP8.92□□□□□ -0.98
PHGDH-215ENST00000641371 EXPH5Q8NEV8 1989 aa8.92□□□□□ -0.98
PHGDH-215ENST00000641371 IGHV1-45A0A0A0MS14 117 aa8.91□□□□□ -0.98
PHGDH-215ENST00000641371 ELOA3DA6NLF2 546 aaPredicted RBP8.91□□□□□ -0.98
PHGDH-215ENST00000641371 ZNF99A8MXY4 864 aaPredicted RBP8.91□□□□□ -0.98
PHGDH-215ENST00000641371 TP53I11O14683 189 aa8.91□□□□□ -0.98
PHGDH-215ENST00000641371 PRODHO43272 600 aa8.91□□□□□ -0.98
PHGDH-215ENST00000641371 IDH3BO43837 385 aa8.91□□□□□ -0.98
PHGDH-215ENST00000641371 MAN1A2O60476 641 aa8.91□□□□□ -0.98
PHGDH-215ENST00000641371 ICOSLGO75144 302 aa8.91□□□□□ -0.98
PHGDH-215ENST00000641371 CNOT3O75175 753 aaKnown RBP8.91□□□□□ -0.98
PHGDH-215ENST00000641371 CSO75390 466 aaKnown RBP8.91□□□□□ -0.98
PHGDH-215ENST00000641371 SEC14L2O76054 403 aa8.91□□□□□ -0.98
PHGDH-215ENST00000641371 SOX14O95416 240 aa8.91□□□□□ -0.98
PHGDH-215ENST00000641371 IFNGP01579 166 aa8.91□□□□□ -0.98
PHGDH-215ENST00000641371 TP53P04637 393 aaPredicted RBP8.91□□□□□ -0.98
PHGDH-215ENST00000641371 SAGP10523 405 aaPredicted RBP8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms