RNA–Protein interactions for RNA: ENST00000641314.1

PHGDH-214, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,558 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-214ENST00000641314 RAPSNQ13702 412 aa16.06■□□□□ 0.16
PHGDH-214ENST00000641314 COL28A1Q2UY09 1125 aa16.06■□□□□ 0.16
PHGDH-214ENST00000641314 ABHD17BQ5VST6 288 aa16.06■□□□□ 0.16
PHGDH-214ENST00000641314 RRM2BQ7LG56 351 aa16.06■□□□□ 0.16
PHGDH-214ENST00000641314 CYP4Z2PQ8N1L4 340 aa16.06■□□□□ 0.16
PHGDH-214ENST00000641314 GALNT16Q8N428 558 aa16.06■□□□□ 0.16
PHGDH-214ENST00000641314 LSMEM1Q8N8F7 131 aa16.06■□□□□ 0.16
PHGDH-214ENST00000641314 TOR1AIP2Q8NFQ8 470 aa16.06■□□□□ 0.16
PHGDH-214ENST00000641314 OR4K5Q8NGD3 323 aa16.06■□□□□ 0.16
PHGDH-214ENST00000641314 GTPBP3Q969Y2 492 aaKnown RBP16.06■□□□□ 0.16
PHGDH-214ENST00000641314 ICAM5Q9UMF0 924 aa16.06■□□□□ 0.16
PHGDH-214ENST00000641314 MSRB2Q9Y3D2 182 aa16.06■□□□□ 0.16
PHGDH-214ENST00000641314 WIF1Q9Y5W5 379 aa16.06■□□□□ 0.16
PHGDH-214ENST00000641314 AP4B1Q9Y6B7 739 aa16.06■□□□□ 0.16
PHGDH-214ENST00000641314 HEATR5AQ86XA9 2040 aa16.06■□□□□ 0.16
PHGDH-214ENST00000641314 DOCK10Q96BY6 2186 aa16.05■□□□□ 0.16
PHGDH-214ENST00000641314 A0A087WUU8 490 aa16.05■□□□□ 0.16
PHGDH-214ENST00000641314 ARRDC5A6NEK1 342 aa16.05■□□□□ 0.16
PHGDH-214ENST00000641314 LYPD3O95274 346 aa16.05■□□□□ 0.16
PHGDH-214ENST00000641314 F10P00742 488 aa16.05■□□□□ 0.16
PHGDH-214ENST00000641314 CCL3P10147 92 aa16.05■□□□□ 0.16
PHGDH-214ENST00000641314 CBLP22681 906 aa16.05■□□□□ 0.16
PHGDH-214ENST00000641314 LSM11P83369 360 aaKnown RBP eCLIP16.05■□□□□ 0.16
PHGDH-214ENST00000641314 OC90Q02509 493 aaPredicted RBP16.05■□□□□ 0.16
PHGDH-214ENST00000641314 CDC20Q12834 499 aa16.05■□□□□ 0.16
PHGDH-214ENST00000641314 ALG10BQ5I7T1 473 aa16.05■□□□□ 0.16
PHGDH-214ENST00000641314 KDM4DQ6B0I6 523 aa16.05■□□□□ 0.16
PHGDH-214ENST00000641314 WBP2NLQ6ICG8 309 aa16.05■□□□□ 0.16
PHGDH-214ENST00000641314 ZNF770Q6IQ21 691 aaPredicted RBP16.05■□□□□ 0.16
PHGDH-214ENST00000641314 WDR88Q6ZMY6 472 aa16.05■□□□□ 0.16
PHGDH-214ENST00000641314 ZNF248Q8NDW4 579 aa16.05■□□□□ 0.16
PHGDH-214ENST00000641314 OR5W2Q8NH69 310 aa16.05■□□□□ 0.16
PHGDH-214ENST00000641314 CYGBQ8WWM9 190 aa16.05■□□□□ 0.16
PHGDH-214ENST00000641314 ACOT11Q8WXI4 607 aaPredicted RBP16.05■□□□□ 0.16
PHGDH-214ENST00000641314 NIPSNAP1Q9BPW8 284 aa16.05■□□□□ 0.16
PHGDH-214ENST00000641314 PRSS27Q9BQR3 290 aa16.05■□□□□ 0.16
PHGDH-214ENST00000641314 TOR3AQ9H497 397 aa16.05■□□□□ 0.16
PHGDH-214ENST00000641314 ZNF556Q9HAH1 456 aa16.05■□□□□ 0.16
PHGDH-214ENST00000641314 SDHAF3Q9NRP4 125 aa16.05■□□□□ 0.16
PHGDH-214ENST00000641314 RYDENQ9NUL5 291 aaKnown RBP16.05■□□□□ 0.16
PHGDH-214ENST00000641314 ABI3Q9P2A4 366 aa16.05■□□□□ 0.16
PHGDH-214ENST00000641314 GNB5O14775 395 aa16.04■□□□□ 0.16
PHGDH-214ENST00000641314 CHP2O43745 196 aa16.04■□□□□ 0.16
PHGDH-214ENST00000641314 PIP5K1CO60331 668 aa16.04■□□□□ 0.16
PHGDH-214ENST00000641314 CDC40O60508 579 aaKnown RBP eCLIP16.04■□□□□ 0.16
PHGDH-214ENST00000641314 GASTP01350 101 aa16.04■□□□□ 0.16
PHGDH-214ENST00000641314 PGCP20142 388 aa16.04■□□□□ 0.16
PHGDH-214ENST00000641314 RAD23AP54725 363 aa16.04■□□□□ 0.16
PHGDH-214ENST00000641314 UGT2B15P54855 530 aa16.04■□□□□ 0.16
PHGDH-214ENST00000641314 CBFBQ13951 182 aa16.04■□□□□ 0.16
PHGDH-214ENST00000641314 PGBD2Q6P3X8 592 aa16.04■□□□□ 0.16
PHGDH-214ENST00000641314 ULK3Q6PHR2 472 aa16.04■□□□□ 0.16
PHGDH-214ENST00000641314 RTL4Q6ZR62 310 aa16.04■□□□□ 0.16
PHGDH-214ENST00000641314 LINC00696Q6ZRV3 163 aa16.04■□□□□ 0.16
PHGDH-214ENST00000641314 MEX3DQ86XN8 651 aaKnown RBP16.04■□□□□ 0.16
PHGDH-214ENST00000641314 LINC00471Q8N535 108 aa16.04■□□□□ 0.16
PHGDH-214ENST00000641314 PAQR8Q8TEZ7 354 aa16.04■□□□□ 0.16
PHGDH-214ENST00000641314 SECISBP2Q96T21 854 aaKnown RBP16.04■□□□□ 0.16
PHGDH-214ENST00000641314 PSD2Q9BQI7 771 aa16.04■□□□□ 0.16
PHGDH-214ENST00000641314 ING2Q9H160 280 aa16.04■□□□□ 0.16
PHGDH-214ENST00000641314 RIBC2Q9H4K1 309 aa16.04■□□□□ 0.16
PHGDH-214ENST00000641314 MED11Q9P086 117 aa16.04■□□□□ 0.16
PHGDH-214ENST00000641314 RAB26Q9ULW5 256 aa16.04■□□□□ 0.16
PHGDH-214ENST00000641314 POLHQ9Y253 713 aa16.04■□□□□ 0.16
PHGDH-214ENST00000641314 G3V3Y1 287 aa16.04■□□□□ 0.16
PHGDH-214ENST00000641314 CYB561P49447 251 aa16.04■□□□□ 0.16
PHGDH-214ENST00000641314 HLCSP50747 726 aa16.04■□□□□ 0.16
PHGDH-214ENST00000641314 MERTKQ12866 999 aa16.04■□□□□ 0.16
PHGDH-214ENST00000641314 TOMM34Q15785 309 aaPredicted RBP16.04■□□□□ 0.16
PHGDH-214ENST00000641314 RFX4Q33E94 735 aa16.04■□□□□ 0.16
PHGDH-214ENST00000641314 NHSL2Q5HYW2 709 aa16.04■□□□□ 0.16
PHGDH-214ENST00000641314 SLC22A10Q63ZE4 541 aa16.04■□□□□ 0.16
PHGDH-214ENST00000641314 SLC30A6Q6NXT4 461 aa16.04■□□□□ 0.16
PHGDH-214ENST00000641314 DHRSXQ8N5I4 330 aa16.04■□□□□ 0.16
PHGDH-214ENST00000641314 PIGXQ8TBF5 258 aa16.04■□□□□ 0.16
PHGDH-214ENST00000641314 DNAJA4Q8WW22 397 aaPredicted RBP16.04■□□□□ 0.16
PHGDH-214ENST00000641314 C3orf49Q96BT1 292 aa16.04■□□□□ 0.16
PHGDH-214ENST00000641314 ZNF524Q96C55 264 aa16.04■□□□□ 0.16
PHGDH-214ENST00000641314 FAM122AQ96E09 287 aa16.04■□□□□ 0.16
PHGDH-214ENST00000641314 SGCZQ96LD1 299 aa16.04■□□□□ 0.16
PHGDH-214ENST00000641314 RDH12Q96NR8 316 aa16.04■□□□□ 0.16
PHGDH-214ENST00000641314 MBOAT4Q96T53 435 aa16.04■□□□□ 0.16
PHGDH-214ENST00000641314 ADI1Q9BV57 179 aa16.04■□□□□ 0.16
PHGDH-214ENST00000641314 Q9H521 79 aa16.04■□□□□ 0.16
PHGDH-214ENST00000641314 PAPOLBQ9NRJ5 636 aaKnown RBP16.04■□□□□ 0.16
PHGDH-214ENST00000641314 GPR83Q9NYM4 423 aa16.04■□□□□ 0.16
PHGDH-214ENST00000641314 MGAT4BQ9UQ53 548 aa16.04■□□□□ 0.16
PHGDH-214ENST00000641314 HRH3Q9Y5N1 445 aa16.04■□□□□ 0.16
PHGDH-214ENST00000641314 FREM2Q5SZK8 3169 aa16.03■□□□□ 0.16
PHGDH-214ENST00000641314 KPNA4O00629 521 aaPredicted RBP16.03■□□□□ 0.16
PHGDH-214ENST00000641314 GP1BBP13224 206 aa16.03■□□□□ 0.16
PHGDH-214ENST00000641314 CDH2P19022 906 aaPredicted RBP16.03■□□□□ 0.16
PHGDH-214ENST00000641314 IFNGR2P38484 337 aa16.03■□□□□ 0.16
PHGDH-214ENST00000641314 CASRP41180 1078 aa16.03■□□□□ 0.16
PHGDH-214ENST00000641314 KCNAB2Q13303 367 aa16.03■□□□□ 0.16
PHGDH-214ENST00000641314 SNTA1Q13424 505 aa16.03■□□□□ 0.16
PHGDH-214ENST00000641314 QPRTQ15274 297 aa16.03■□□□□ 0.16
PHGDH-214ENST00000641314 INPP5JQ15735 1006 aaPredicted RBP16.03■□□□□ 0.16
PHGDH-214ENST00000641314 DEFB109BQ30KR1 87 aa16.03■□□□□ 0.16
PHGDH-214ENST00000641314 MBOAT2Q6ZWT7 520 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms