RNA–Protein interactions for RNA: ENST00000639857.1

PTPN11-207, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 5 BASIC

Gene PTPN11, Length 801 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-207ENST00000639857 CPNE4Q96A23 557 aaPredicted RBP15.88■□□□□ 0.13
PTPN11-207ENST00000639857 DACH2Q96NX9 599 aa15.88■□□□□ 0.13
PTPN11-207ENST00000639857 KLHDC3Q9BQ90 382 aa15.88■□□□□ 0.13
PTPN11-207ENST00000639857 INPP5KQ9BT40 448 aa15.88■□□□□ 0.13
PTPN11-207ENST00000639857 PRRG4Q9BZD6 226 aa15.88■□□□□ 0.13
PTPN11-207ENST00000639857 EXOSC3Q9NQT5 275 aaKnown RBP15.88■□□□□ 0.13
PTPN11-207ENST00000639857 RASSF1Q9NS23 344 aa15.88■□□□□ 0.13
PTPN11-207ENST00000639857 ELOVL5Q9NYP7 299 aa15.88■□□□□ 0.13
PTPN11-207ENST00000639857 EMC9Q9Y3B6 208 aa15.88■□□□□ 0.13
PTPN11-207ENST00000639857 A0A0J9YW62 118 aa15.87■□□□□ 0.13
PTPN11-207ENST00000639857 C9JVG2 144 aa15.87■□□□□ 0.13
PTPN11-207ENST00000639857 TNFSF11O14788 317 aa15.87■□□□□ 0.13
PTPN11-207ENST00000639857 POLR3GO15318 223 aaPredicted RBP15.87■□□□□ 0.13
PTPN11-207ENST00000639857 SS18L1O75177 396 aaPredicted RBP15.87■□□□□ 0.13
PTPN11-207ENST00000639857 CGAP01215 116 aa15.87■□□□□ 0.13
PTPN11-207ENST00000639857 PABPC4LP0CB38 370 aaKnown RBP15.87■□□□□ 0.13
PTPN11-207ENST00000639857 PGCP20142 388 aa15.87■□□□□ 0.13
PTPN11-207ENST00000639857 IL11P20809 199 aa15.87■□□□□ 0.13
PTPN11-207ENST00000639857 PGM1P36871 562 aa15.87■□□□□ 0.13
PTPN11-207ENST00000639857 CDKN2CP42773 168 aa15.87■□□□□ 0.13
PTPN11-207ENST00000639857 CASP9P55211 416 aa15.87■□□□□ 0.13
PTPN11-207ENST00000639857 SNTB1Q13884 538 aaKnown RBP15.87■□□□□ 0.13
PTPN11-207ENST00000639857 QPRTQ15274 297 aa15.87■□□□□ 0.13
PTPN11-207ENST00000639857 NDUFAF6Q330K2 333 aa15.87■□□□□ 0.13
PTPN11-207ENST00000639857 VWA1Q6PCB0 445 aa15.87■□□□□ 0.13
PTPN11-207ENST00000639857 BTLAQ7Z6A9 289 aa15.87■□□□□ 0.13
PTPN11-207ENST00000639857 DYDC1Q8WWB3 177 aa15.87■□□□□ 0.13
PTPN11-207ENST00000639857 STON2Q8WXE9 905 aa15.87■□□□□ 0.13
PTPN11-207ENST00000639857 ITCHQ96J02 903 aa15.87■□□□□ 0.13
PTPN11-207ENST00000639857 SLC39A3Q9BRY0 314 aa15.87■□□□□ 0.13
PTPN11-207ENST00000639857 POLDIP3Q9BY77 421 aaKnown RBP15.87■□□□□ 0.13
PTPN11-207ENST00000639857 CLEC4MQ9H2X3 399 aaPredicted RBP15.87■□□□□ 0.13
PTPN11-207ENST00000639857 TMEM185BQ9H7F4 350 aa15.87■□□□□ 0.13
PTPN11-207ENST00000639857 GP6Q9HCN6 339 aa15.87■□□□□ 0.13
PTPN11-207ENST00000639857 TCF7L2Q9NQB0 619 aa15.87■□□□□ 0.13
PTPN11-207ENST00000639857 TMEM45AQ9NWC5 275 aa15.87■□□□□ 0.13
PTPN11-207ENST00000639857 DNAJB12Q9NXW2 375 aaKnown RBP15.87■□□□□ 0.13
PTPN11-207ENST00000639857 EDARQ9UNE0 448 aa15.87■□□□□ 0.13
PTPN11-207ENST00000639857 CCDC168Q8NDH2 2452 aa15.86■□□□□ 0.13
PTPN11-207ENST00000639857 CENPVL1A0A0U1RR11 272 aa15.86■□□□□ 0.13
PTPN11-207ENST00000639857 FAM234BA2RU67 622 aa15.86■□□□□ 0.13
PTPN11-207ENST00000639857 CXCL13O43927 109 aa15.86■□□□□ 0.13
PTPN11-207ENST00000639857 SMNDC1O75940 238 aaKnown RBP eCLIP15.86■□□□□ 0.13
PTPN11-207ENST00000639857 H6PDO95479 791 aa15.86■□□□□ 0.13
PTPN11-207ENST00000639857 PLGP00747 810 aaPredicted RBP15.86■□□□□ 0.13
PTPN11-207ENST00000639857 NID1P14543 1247 aa15.86■□□□□ 0.13
PTPN11-207ENST00000639857 CPOXP36551 454 aa15.86■□□□□ 0.13
PTPN11-207ENST00000639857 CD79BP40259 229 aa15.86■□□□□ 0.13
PTPN11-207ENST00000639857 CCR4P51679 360 aa15.86■□□□□ 0.13
PTPN11-207ENST00000639857 POLR2JP52435 117 aaKnown RBP15.86■□□□□ 0.13
PTPN11-207ENST00000639857 CARD18P57730 90 aa15.86■□□□□ 0.13
PTPN11-207ENST00000639857 STX1BP61266 288 aa15.86■□□□□ 0.13
PTPN11-207ENST00000639857 PPP2R2AP63151 447 aa15.86■□□□□ 0.13
PTPN11-207ENST00000639857 TOMM34Q15785 309 aaPredicted RBP15.86■□□□□ 0.13
PTPN11-207ENST00000639857 ZNF239Q16600 458 aaKnown RBP15.86■□□□□ 0.13
PTPN11-207ENST00000639857 GPAT3Q53EU6 434 aa15.86■□□□□ 0.13
PTPN11-207ENST00000639857 C3orf33Q6P1S2 294 aa15.86■□□□□ 0.13
PTPN11-207ENST00000639857 LRRC74BQ6ZQY2 392 aa15.86■□□□□ 0.13
PTPN11-207ENST00000639857 ZFP90Q8TF47 636 aa15.86■□□□□ 0.13
PTPN11-207ENST00000639857 MARK4Q96L34 752 aa15.86■□□□□ 0.13
PTPN11-207ENST00000639857 CCDC28BQ9BUN5 200 aa15.86■□□□□ 0.13
PTPN11-207ENST00000639857 ST6GALNAC1Q9NSC7 600 aaPredicted RBP15.86■□□□□ 0.13
PTPN11-207ENST00000639857 INTS9Q9NV88 658 aaKnown RBP15.86■□□□□ 0.13
PTPN11-207ENST00000639857 THUMPD1Q9NXG2 353 aaKnown RBP15.86■□□□□ 0.13
PTPN11-207ENST00000639857 NDRG3Q9UGV2 375 aa15.86■□□□□ 0.13
PTPN11-207ENST00000639857 PRDM4Q9UKN5 801 aa15.86■□□□□ 0.13
PTPN11-207ENST00000639857 PROCRQ9UNN8 238 aa15.86■□□□□ 0.13
PTPN11-207ENST00000639857 SPG11Q96JI7 2443 aa15.86■□□□□ 0.13
PTPN11-207ENST00000639857 PRAMEF27A3QJZ7 478 aa15.85■□□□□ 0.13
PTPN11-207ENST00000639857 SH3D21A4FU49 640 aa15.85■□□□□ 0.13
PTPN11-207ENST00000639857 AGAP5A6NIR3 686 aa15.85■□□□□ 0.13
PTPN11-207ENST00000639857 EFNA2O43921 213 aa15.85■□□□□ 0.13
PTPN11-207ENST00000639857 ANP32DO95626 131 aa15.85■□□□□ 0.13
PTPN11-207ENST00000639857 UBTFL6P0CB48 400 aaPredicted RBP15.85■□□□□ 0.13
PTPN11-207ENST00000639857 RPS4Y1P22090 263 aaKnown RBP15.85■□□□□ 0.13
PTPN11-207ENST00000639857 SFTPDP35247 375 aa15.85■□□□□ 0.13
PTPN11-207ENST00000639857 SLC6A8P48029 635 aa15.85■□□□□ 0.13
PTPN11-207ENST00000639857 CTBP2P56545 445 aa15.85■□□□□ 0.13
PTPN11-207ENST00000639857 KCNJ10P78508 379 aa15.85■□□□□ 0.13
PTPN11-207ENST00000639857 GNA13Q14344 377 aa15.85■□□□□ 0.13
PTPN11-207ENST00000639857 RNPS1Q15287 305 aaKnown RBP15.85■□□□□ 0.13
PTPN11-207ENST00000639857 MAPK14Q16539 360 aa15.85■□□□□ 0.13
PTPN11-207ENST00000639857 RFWD2Q8NHY2 731 aa15.85■□□□□ 0.13
PTPN11-207ENST00000639857 RNF128Q8TEB7 428 aa15.85■□□□□ 0.13
PTPN11-207ENST00000639857 SLC25A43Q8WUT9 341 aaPredicted RBP15.85■□□□□ 0.13
PTPN11-207ENST00000639857 OSTF1Q92882 214 aa15.85■□□□□ 0.13
PTPN11-207ENST00000639857 NINJ1Q92982 152 aa15.85■□□□□ 0.13
PTPN11-207ENST00000639857 REXO5Q96IC2 774 aaKnown RBP15.85■□□□□ 0.13
PTPN11-207ENST00000639857 GPATCH1Q9BRR8 931 aaKnown RBP15.85■□□□□ 0.13
PTPN11-207ENST00000639857 TACO1Q9BSH4 297 aaKnown RBP15.85■□□□□ 0.13
PTPN11-207ENST00000639857 THUMPD3Q9BV44 507 aaKnown RBP15.85■□□□□ 0.13
PTPN11-207ENST00000639857 SLC38A1Q9H2H9 487 aa15.85■□□□□ 0.13
PTPN11-207ENST00000639857 SLCO1B3Q9NPD5 702 aa15.85■□□□□ 0.13
PTPN11-207ENST00000639857 FANCFQ9NPI8 374 aa15.85■□□□□ 0.13
PTPN11-207ENST00000639857 PLSCR4Q9NRQ2 329 aa15.85■□□□□ 0.13
PTPN11-207ENST00000639857 CALML5Q9NZT1 146 aa15.85■□□□□ 0.13
PTPN11-207ENST00000639857 TESMINQ9Y4I5 508 aa15.85■□□□□ 0.13
PTPN11-207ENST00000639857 GSNP06396 782 aa15.84■□□□□ 0.13
PTPN11-207ENST00000639857 FKBP2P26885 142 aaKnown RBP15.84■□□□□ 0.13
PTPN11-207ENST00000639857 SLC7A1P30825 629 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms