RNA–Protein interactions for RNA: ENST00000639300.1

SCARB2-216, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-216ENST00000639300 DKKL1Q9UK85 242 aa13.46□□□□□ -0.25
SCARB2-216ENST00000639300 ALPK2Q86TB3 2170 aa13.46□□□□□ -0.25
SCARB2-216ENST00000639300 APC2O95996 2303 aa13.46□□□□□ -0.25
SCARB2-216ENST00000639300 HTR3EA5X5Y0 456 aa13.46□□□□□ -0.25
SCARB2-216ENST00000639300 SOCS6O14544 535 aa13.46□□□□□ -0.25
SCARB2-216ENST00000639300 GATBO75879 557 aaKnown RBP13.46□□□□□ -0.25
SCARB2-216ENST00000639300 SCGB1D2O95969 90 aa13.46□□□□□ -0.25
SCARB2-216ENST00000639300 IL1AP01583 271 aa13.46□□□□□ -0.25
SCARB2-216ENST00000639300 S100A9P06702 114 aaKnown RBP13.46□□□□□ -0.25
SCARB2-216ENST00000639300 SFTPDP35247 375 aa13.46□□□□□ -0.25
SCARB2-216ENST00000639300 ARPC4P59998 168 aa13.46□□□□□ -0.25
SCARB2-216ENST00000639300 PRPS1P60891 318 aa13.46□□□□□ -0.25
SCARB2-216ENST00000639300 CDNFQ49AH0 187 aa13.46□□□□□ -0.25
SCARB2-216ENST00000639300 AGAP6Q5VW22 663 aa13.46□□□□□ -0.25
SCARB2-216ENST00000639300 LRRN1Q6UXK5 716 aa13.46□□□□□ -0.25
SCARB2-216ENST00000639300 PHC2Q8IXK0 858 aa13.46□□□□□ -0.25
SCARB2-216ENST00000639300 OR1E3Q8WZA6 343 aa13.46□□□□□ -0.25
SCARB2-216ENST00000639300 TBC1D20Q96BZ9 403 aa13.46□□□□□ -0.25
SCARB2-216ENST00000639300 AGAP4Q96P64 663 aa13.46□□□□□ -0.25
SCARB2-216ENST00000639300 HDAC8Q9BY41 377 aa13.46□□□□□ -0.25
SCARB2-216ENST00000639300 HOXD1Q9GZZ0 328 aa13.46□□□□□ -0.25
SCARB2-216ENST00000639300 KLHL21Q9UJP4 597 aa13.46□□□□□ -0.25
SCARB2-216ENST00000639300 RARRES3Q9UL19 164 aa13.46□□□□□ -0.25
SCARB2-216ENST00000639300 HOXC11O43248 304 aaPredicted RBP13.46□□□□□ -0.26
SCARB2-216ENST00000639300 ZNF217O75362 1048 aa13.46□□□□□ -0.26
SCARB2-216ENST00000639300 CXCL10P02778 98 aa13.46□□□□□ -0.26
SCARB2-216ENST00000639300 TNFRSF17Q02223 184 aa13.46□□□□□ -0.26
SCARB2-216ENST00000639300 SLC14A1Q13336 389 aa13.46□□□□□ -0.26
SCARB2-216ENST00000639300 GRK1Q15835 563 aa13.46□□□□□ -0.26
SCARB2-216ENST00000639300 TMEM52BQ4KMG9 183 aa13.46□□□□□ -0.26
SCARB2-216ENST00000639300 NKAPLQ5M9Q1 402 aa13.46□□□□□ -0.26
SCARB2-216ENST00000639300 SLC48A1Q6P1K1 146 aa13.46□□□□□ -0.26
SCARB2-216ENST00000639300 PTOV1Q86YD1 416 aa13.46□□□□□ -0.26
SCARB2-216ENST00000639300 PLPP6Q8IY26 295 aa13.46□□□□□ -0.26
SCARB2-216ENST00000639300 OR5J2Q8NH18 312 aa13.46□□□□□ -0.26
SCARB2-216ENST00000639300 COQ8AQ8NI60 647 aa13.46□□□□□ -0.26
SCARB2-216ENST00000639300 TMEM255BQ8WV15 326 aa13.46□□□□□ -0.26
SCARB2-216ENST00000639300 NTN4Q9HB63 628 aa13.46□□□□□ -0.26
SCARB2-216ENST00000639300 NDRG4Q9ULP0 352 aaKnown RBP13.46□□□□□ -0.26
SCARB2-216ENST00000639300 MAB21L2Q9Y586 359 aa13.46□□□□□ -0.26
SCARB2-216ENST00000639300 PCDHGB2Q9Y5G2 931 aa13.46□□□□□ -0.26
SCARB2-216ENST00000639300 GABRPO00591 440 aa13.46□□□□□ -0.26
SCARB2-216ENST00000639300 LCMT2O60294 686 aaKnown RBP13.46□□□□□ -0.26
SCARB2-216ENST00000639300 CTSLP07711 333 aa13.46□□□□□ -0.26
SCARB2-216ENST00000639300 ENDOUP21128 410 aaKnown RBP13.46□□□□□ -0.26
SCARB2-216ENST00000639300 CFL1P23528 166 aaKnown RBP13.46□□□□□ -0.26
SCARB2-216ENST00000639300 PLGLB1Q02325 96 aa13.46□□□□□ -0.26
SCARB2-216ENST00000639300 CRMP1Q14194 572 aa13.46□□□□□ -0.26
SCARB2-216ENST00000639300 RAET1LQ5VY80 246 aa13.46□□□□□ -0.26
SCARB2-216ENST00000639300 PARM1Q6UWI2 310 aa13.46□□□□□ -0.26
SCARB2-216ENST00000639300 PATE1Q8WXA2 126 aa13.46□□□□□ -0.26
SCARB2-216ENST00000639300 ZNF582Q96NG8 517 aaPredicted RBP13.46□□□□□ -0.26
SCARB2-216ENST00000639300 A0A1W2PR48 441 aa13.45□□□□□ -0.26
SCARB2-216ENST00000639300 DISC1C4P0D8 188 aa13.45□□□□□ -0.26
SCARB2-216ENST00000639300 PEX12O00623 359 aa13.45□□□□□ -0.26
SCARB2-216ENST00000639300 CREBL2O60519 120 aaPredicted RBP13.45□□□□□ -0.26
SCARB2-216ENST00000639300 FUCA1P04066 466 aa13.45□□□□□ -0.26
SCARB2-216ENST00000639300 SNTA1Q13424 505 aa13.45□□□□□ -0.26
SCARB2-216ENST00000639300 SLC18B1Q6NT16 456 aa13.45□□□□□ -0.26
SCARB2-216ENST00000639300 TECPR1Q7Z6L1 1165 aa13.45□□□□□ -0.26
SCARB2-216ENST00000639300 DUSP21Q9H596 190 aa13.45□□□□□ -0.26
SCARB2-216ENST00000639300 TXNL4BQ9NX01 149 aaKnown RBP13.45□□□□□ -0.26
SCARB2-216ENST00000639300 TBC1D29Q9UFV1 150 aa13.45□□□□□ -0.26
SCARB2-216ENST00000639300 OR2A25A4D2G3 310 aa13.45□□□□□ -0.26
SCARB2-216ENST00000639300 UBL4AP11441 157 aa13.45□□□□□ -0.26
SCARB2-216ENST00000639300 FTSJ1Q9UET6 329 aa13.45□□□□□ -0.26
SCARB2-216ENST00000639300 POU2F3Q9UKI9 436 aa13.45□□□□□ -0.26
SCARB2-216ENST00000639300 FAM155AB1AL88 458 aaPredicted RBP13.45□□□□□ -0.26
SCARB2-216ENST00000639300 S100A6P06703 90 aa13.45□□□□□ -0.26
SCARB2-216ENST00000639300 IDUAP35475 653 aa13.45□□□□□ -0.26
SCARB2-216ENST00000639300 HTR2BP41595 481 aa13.45□□□□□ -0.26
SCARB2-216ENST00000639300 ARHGDIBP52566 201 aa13.45□□□□□ -0.26
SCARB2-216ENST00000639300 TLE3Q04726 772 aa13.45□□□□□ -0.26
SCARB2-216ENST00000639300 PDE7AQ13946 482 aa13.45□□□□□ -0.26
SCARB2-216ENST00000639300 TMEM240Q5SV17 173 aa13.45□□□□□ -0.26
SCARB2-216ENST00000639300 ZNF322Q6U7Q0 402 aaPredicted RBP13.45□□□□□ -0.26
SCARB2-216ENST00000639300 Q6ZNX1 250 aa13.45□□□□□ -0.26
SCARB2-216ENST00000639300 DNAJC5GQ8N7S2 189 aa13.45□□□□□ -0.26
SCARB2-216ENST00000639300 ADAMTS18Q8TE60 1221 aa13.45□□□□□ -0.26
SCARB2-216ENST00000639300 NXPE2Q96DL1 559 aa13.45□□□□□ -0.26
SCARB2-216ENST00000639300 ZNF486Q96H40 463 aaPredicted RBP13.45□□□□□ -0.26
SCARB2-216ENST00000639300 SEC14L5O43304 696 aa13.44□□□□□ -0.26
SCARB2-216ENST00000639300 IFNA21P01568 189 aa13.44□□□□□ -0.26
SCARB2-216ENST00000639300 HOXA9P31269 272 aa13.44□□□□□ -0.26
SCARB2-216ENST00000639300 YBX1P67809 324 aaKnown RBP13.44□□□□□ -0.26
SCARB2-216ENST00000639300 GXYLT1Q4G148 440 aa13.44□□□□□ -0.26
SCARB2-216ENST00000639300 NKAIN4Q8IVV8 208 aa13.44□□□□□ -0.26
SCARB2-216ENST00000639300 RBM12BQ8IXT5 1001 aaKnown RBP13.44□□□□□ -0.26
SCARB2-216ENST00000639300 KLHL15Q96M94 604 aa13.44□□□□□ -0.26
SCARB2-216ENST00000639300 ACTR6Q9GZN1 396 aa13.44□□□□□ -0.26
SCARB2-216ENST00000639300 SPNS1Q9H2V7 528 aa13.44□□□□□ -0.26
SCARB2-216ENST00000639300 RANBP3Q9H6Z4 567 aaPredicted RBP13.44□□□□□ -0.26
SCARB2-216ENST00000639300 A4GALTQ9NPC4 353 aa13.44□□□□□ -0.26
SCARB2-216ENST00000639300 CBLCQ9ULV8 474 aa13.44□□□□□ -0.26
SCARB2-216ENST00000639300 COL24A1Q17RW2 1714 aa13.44□□□□□ -0.26
SCARB2-216ENST00000639300 NPIPA2E9PIF3 369 aa13.44□□□□□ -0.26
SCARB2-216ENST00000639300 NPIPA3F8WFD2 350 aa13.44□□□□□ -0.26
SCARB2-216ENST00000639300 SLX4IPQ5VYV7 408 aa13.44□□□□□ -0.26
SCARB2-216ENST00000639300 TCEAL6Q6IPX3 200 aa13.44□□□□□ -0.26
SCARB2-216ENST00000639300 PRICKLE2Q7Z3G6 844 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms