RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 MT-ND4P03905 459 aa16.74■□□□□ 0.27
CACNA1A-227ENST00000636549 CBR1P16152 277 aa16.74■□□□□ 0.27
CACNA1A-227ENST00000636549 F2RL1P55085 397 aa16.74■□□□□ 0.27
CACNA1A-227ENST00000636549 PAFAH1B3Q15102 231 aaKnown RBP16.74■□□□□ 0.27
CACNA1A-227ENST00000636549 ATP6AP1Q15904 470 aa16.74■□□□□ 0.27
CACNA1A-227ENST00000636549 ZNF783Q6ZMS7 281 aa16.74■□□□□ 0.27
CACNA1A-227ENST00000636549 SGPP1Q9BX95 441 aa16.74■□□□□ 0.27
CACNA1A-227ENST00000636549 SMCO4Q9NRQ5 59 aa16.74■□□□□ 0.27
CACNA1A-227ENST00000636549 SLC7A8Q9UHI5 535 aa16.74■□□□□ 0.27
CACNA1A-227ENST00000636549 F8W036 122 aa16.74■□□□□ 0.27
CACNA1A-227ENST00000636549 SUSD5O60279 629 aa16.74■□□□□ 0.27
CACNA1A-227ENST00000636549 LAMP1P11279 417 aa16.74■□□□□ 0.27
CACNA1A-227ENST00000636549 HOXD8P13378 290 aaPredicted RBP16.74■□□□□ 0.27
CACNA1A-227ENST00000636549 BLOC1S1P78537 153 aa16.74■□□□□ 0.27
CACNA1A-227ENST00000636549 OGFOD3Q6PK18 319 aa16.74■□□□□ 0.27
CACNA1A-227ENST00000636549 VASH2Q86V25 355 aa16.74■□□□□ 0.27
CACNA1A-227ENST00000636549 AIPO00170 330 aa16.74■□□□□ 0.27
CACNA1A-227ENST00000636549 TMEM217Q8N7C4 229 aa16.74■□□□□ 0.27
CACNA1A-227ENST00000636549 C19orf12Q9NSK7 152 aa16.74■□□□□ 0.27
CACNA1A-227ENST00000636549 ARPC5O15511 151 aa16.74■□□□□ 0.27
CACNA1A-227ENST00000636549 C6orf136Q5SQH8 315 aa16.74■□□□□ 0.27
CACNA1A-227ENST00000636549 COMMD6Q7Z4G1 85 aa16.74■□□□□ 0.27
CACNA1A-227ENST00000636549 VWA5B2Q8N398 1253 aa16.74■□□□□ 0.27
CACNA1A-227ENST00000636549 LRRC57Q8N9N7 239 aa16.74■□□□□ 0.27
CACNA1A-227ENST00000636549 OR1N1Q8NGS0 311 aa16.74■□□□□ 0.27
CACNA1A-227ENST00000636549 SEZ6LQ9BYH1 1024 aa16.74■□□□□ 0.27
CACNA1A-227ENST00000636549 SMAD6O43541 496 aaKnown RBP16.73■□□□□ 0.27
CACNA1A-227ENST00000636549 MT-ND2P03891 347 aa16.73■□□□□ 0.27
CACNA1A-227ENST00000636549 WDR4P57081 412 aaKnown RBP16.73■□□□□ 0.27
CACNA1A-227ENST00000636549 OR7E24Q6IFN5 339 aa16.73■□□□□ 0.27
CACNA1A-227ENST00000636549 CRELD2Q6UXH1 353 aaPredicted RBP16.73■□□□□ 0.27
CACNA1A-227ENST00000636549 ADGRF3Q8IZF5 1079 aa16.73■□□□□ 0.27
CACNA1A-227ENST00000636549 ISOC1Q96CN7 298 aa16.73■□□□□ 0.27
CACNA1A-227ENST00000636549 EHFQ9NZC4 300 aa16.73■□□□□ 0.27
CACNA1A-227ENST00000636549 ARHGAP11BQ3KRB8 267 aa16.73■□□□□ 0.27
CACNA1A-227ENST00000636549 SYT13Q7L8C5 426 aa16.73■□□□□ 0.27
CACNA1A-227ENST00000636549 PBDC1Q9BVG4 233 aa16.73■□□□□ 0.27
CACNA1A-227ENST00000636549 PLEKHM1Q9Y4G2 1056 aa16.73■□□□□ 0.27
CACNA1A-227ENST00000636549 NXPH2O95156 264 aa16.73■□□□□ 0.27
CACNA1A-227ENST00000636549 OPCMLQ14982 345 aa16.73■□□□□ 0.27
CACNA1A-227ENST00000636549 BAIAP2L2Q6UXY1 529 aa16.73■□□□□ 0.27
CACNA1A-227ENST00000636549 ZNF367Q7RTV3 350 aa16.73■□□□□ 0.27
CACNA1A-227ENST00000636549 LINC00346Q8IVM7 164 aa16.73■□□□□ 0.27
CACNA1A-227ENST00000636549 CRXO43186 299 aaPredicted RBP16.73■□□□□ 0.27
CACNA1A-227ENST00000636549 EVI2BP34910 448 aa16.73■□□□□ 0.27
CACNA1A-227ENST00000636549 SRP14P37108 136 aaKnown RBP16.73■□□□□ 0.27
CACNA1A-227ENST00000636549 SNTB2Q13425 540 aaKnown RBP16.73■□□□□ 0.27
CACNA1A-227ENST00000636549 CNN3Q15417 329 aaKnown RBP16.73■□□□□ 0.27
CACNA1A-227ENST00000636549 NETO1Q8TDF5 533 aa16.73■□□□□ 0.27
CACNA1A-227ENST00000636549 GPR22Q99680 433 aa16.73■□□□□ 0.27
CACNA1A-227ENST00000636549 ALG8Q9BVK2 526 aa16.73■□□□□ 0.27
CACNA1A-227ENST00000636549 PEAK1Q9H792 1746 aa16.73■□□□□ 0.27
CACNA1A-227ENST00000636549 A0A1W2PPH5 198 aa16.73■□□□□ 0.27
CACNA1A-227ENST00000636549 OR7C1O76099 320 aaPredicted RBP16.73■□□□□ 0.27
CACNA1A-227ENST00000636549 APOA2P02652 100 aa16.73■□□□□ 0.27
CACNA1A-227ENST00000636549 SSR4P51571 173 aa16.73■□□□□ 0.27
CACNA1A-227ENST00000636549 ZNF33AQ06730 810 aa16.73■□□□□ 0.27
CACNA1A-227ENST00000636549 TESK1Q15569 626 aa16.73■□□□□ 0.27
CACNA1A-227ENST00000636549 PDLIM3Q53GG5 364 aaPredicted RBP16.73■□□□□ 0.27
CACNA1A-227ENST00000636549 FAM96BQ9Y3D0 163 aa16.73■□□□□ 0.27
CACNA1A-227ENST00000636549 AQP12BA6NM10 295 aa16.72■□□□□ 0.27
CACNA1A-227ENST00000636549 TEX26Q8N6G2 289 aa16.72■□□□□ 0.27
CACNA1A-227ENST00000636549 SUMF1Q8NBK3 374 aa16.72■□□□□ 0.27
CACNA1A-227ENST00000636549 LOC102725191A0A1B0GVB3 256 aa16.72■□□□□ 0.27
CACNA1A-227ENST00000636549 PRAMEF4O60810 478 aa16.72■□□□□ 0.27
CACNA1A-227ENST00000636549 BCAS2O75934 225 aaPredicted RBP16.72■□□□□ 0.27
CACNA1A-227ENST00000636549 CPMP14384 443 aa16.72■□□□□ 0.27
CACNA1A-227ENST00000636549 VEGFCP49767 419 aa16.72■□□□□ 0.27
CACNA1A-227ENST00000636549 ACTC1P68032 377 aa16.72■□□□□ 0.27
CACNA1A-227ENST00000636549 ACTA1P68133 377 aa16.72■□□□□ 0.27
CACNA1A-227ENST00000636549 GARNL3Q5VVW2 1013 aa16.72■□□□□ 0.27
CACNA1A-227ENST00000636549 TECTBQ96PL2 329 aa16.72■□□□□ 0.27
CACNA1A-227ENST00000636549 SC5DO75845 299 aa16.72■□□□□ 0.27
CACNA1A-227ENST00000636549 SCO1O75880 301 aa16.72■□□□□ 0.27
CACNA1A-227ENST00000636549 RETP07949 1114 aa16.72■□□□□ 0.27
CACNA1A-227ENST00000636549 CARD18P57730 90 aa16.72■□□□□ 0.27
CACNA1A-227ENST00000636549 WDR5P61964 334 aaKnown RBP16.72■□□□□ 0.27
CACNA1A-227ENST00000636549 SERINC5Q86VE9 423 aa16.72■□□□□ 0.27
CACNA1A-227ENST00000636549 COMMD7Q86VX2 200 aa16.72■□□□□ 0.27
CACNA1A-227ENST00000636549 FAM174AQ8TBP5 190 aa16.72■□□□□ 0.27
CACNA1A-227ENST00000636549 ARRDC1-AS1Q9H2J1 176 aa16.72■□□□□ 0.27
CACNA1A-227ENST00000636549 CD93Q9NPY3 652 aa16.72■□□□□ 0.27
CACNA1A-227ENST00000636549 INIPQ9NRY2 104 aa16.72■□□□□ 0.27
CACNA1A-227ENST00000636549 PAK1IP1Q9NWT1 392 aaPredicted RBP16.72■□□□□ 0.27
CACNA1A-227ENST00000636549 ACTR3BQ9P1U1 418 aa16.72■□□□□ 0.27
CACNA1A-227ENST00000636549 TMEM14AQ9Y6G1 99 aa16.72■□□□□ 0.27
CACNA1A-227ENST00000636549 TRAF3IP2O43734 574 aaPredicted RBP16.72■□□□□ 0.27
CACNA1A-227ENST00000636549 ARSDP51689 593 aa16.72■□□□□ 0.27
CACNA1A-227ENST00000636549 C3P1Q6ZMU1 363 aa16.72■□□□□ 0.27
CACNA1A-227ENST00000636549 ESPNLQ6ZVH7 1005 aa16.72■□□□□ 0.27
CACNA1A-227ENST00000636549 MKXQ8IYA7 352 aa16.72■□□□□ 0.27
CACNA1A-227ENST00000636549 PQLC3Q8N755 202 aa16.72■□□□□ 0.27
CACNA1A-227ENST00000636549 MMP28Q9H239 520 aa16.72■□□□□ 0.27
CACNA1A-227ENST00000636549 NOX3Q9HBY0 568 aa16.72■□□□□ 0.27
CACNA1A-227ENST00000636549 SDHAF2Q9NX18 166 aa16.72■□□□□ 0.27
CACNA1A-227ENST00000636549 Q9Y3F1 56 aa16.72■□□□□ 0.27
CACNA1A-227ENST00000636549 PLIN4Q96Q06 1357 aa16.72■□□□□ 0.27
CACNA1A-227ENST00000636549 IGHV3-15A0A0B4J1V0 119 aa16.72■□□□□ 0.27
CACNA1A-227ENST00000636549 NKX6-3A6NJ46 265 aa16.72■□□□□ 0.27
CACNA1A-227ENST00000636549 HIDE1A8MVS5 230 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms