RNA–Protein interactions for RNA: ENST00000622183.1

CPNE3-213, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 156 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-213ENST00000622183 CYP2S1Q96SQ9 504 aa3.71□□□□□ -1.82
CPNE3-213ENST00000622183 MCHR1Q99705 422 aa3.71□□□□□ -1.82
CPNE3-213ENST00000622183 SLC35A5Q9BS91 424 aa3.71□□□□□ -1.82
CPNE3-213ENST00000622183 NIPSNAP3BQ9BS92 247 aa3.71□□□□□ -1.82
CPNE3-213ENST00000622183 MAGT1Q9H0U3 335 aa3.71□□□□□ -1.82
CPNE3-213ENST00000622183 RHBGQ9H310 441 aa3.71□□□□□ -1.82
CPNE3-213ENST00000622183 ANGPTL2Q9UKU9 493 aa3.71□□□□□ -1.82
CPNE3-213ENST00000622183 HPCAL4Q9UM19 191 aa3.71□□□□□ -1.82
CPNE3-213ENST00000622183 AK6Q9Y3D8 172 aaKnown RBP3.71□□□□□ -1.82
CPNE3-213ENST00000622183 NAALAD2Q9Y3Q0 740 aa3.71□□□□□ -1.82
CPNE3-213ENST00000622183 GON4LQ3T8J9 2241 aa3.7□□□□□ -1.82
CPNE3-213ENST00000622183 PGK1P00558 417 aa3.7□□□□□ -1.82
CPNE3-213ENST00000622183 IGHG4P01861 327 aa3.7□□□□□ -1.82
CPNE3-213ENST00000622183 STSP08842 583 aa3.7□□□□□ -1.82
CPNE3-213ENST00000622183 IMPDH1P20839 514 aa3.7□□□□□ -1.82
CPNE3-213ENST00000622183 PCMT1P22061 227 aa3.7□□□□□ -1.82
CPNE3-213ENST00000622183 FASP25445 335 aa3.7□□□□□ -1.82
CPNE3-213ENST00000622183 MDH2P40926 338 aaKnown RBP3.7□□□□□ -1.82
CPNE3-213ENST00000622183 CASP4P49662 377 aa3.7□□□□□ -1.82
CPNE3-213ENST00000622183 CEBPDP49716 269 aaPredicted RBP3.7□□□□□ -1.82
CPNE3-213ENST00000622183 LMO4P61968 165 aa3.7□□□□□ -1.82
CPNE3-213ENST00000622183 NCBP1Q09161 790 aaKnown RBP3.7□□□□□ -1.82
CPNE3-213ENST00000622183 SLC25A52Q3SY17 297 aa3.7□□□□□ -1.82
CPNE3-213ENST00000622183 SBK1Q52WX2 424 aa3.7□□□□□ -1.82
CPNE3-213ENST00000622183 TP53I3Q53FA7 332 aa3.7□□□□□ -1.82
CPNE3-213ENST00000622183 BEND3Q5T5X7 828 aa3.7□□□□□ -1.82
CPNE3-213ENST00000622183 LIPNQ5VXI9 398 aa3.7□□□□□ -1.82
CPNE3-213ENST00000622183 OR5M10Q6IEU7 315 aa3.7□□□□□ -1.82
CPNE3-213ENST00000622183 ZSCAN25Q6NSZ9 544 aa3.7□□□□□ -1.82
CPNE3-213ENST00000622183 PAMR1Q6UXH9 720 aa3.7□□□□□ -1.82
CPNE3-213ENST00000622183 BAIAP2L2Q6UXY1 529 aa3.7□□□□□ -1.82
CPNE3-213ENST00000622183 EFL1Q7Z2Z2 1120 aaKnown RBP3.7□□□□□ -1.82
CPNE3-213ENST00000622183 CDC20BQ86Y33 519 aa3.7□□□□□ -1.82
CPNE3-213ENST00000622183 CADM2Q8N3J6 435 aa3.7□□□□□ -1.82
CPNE3-213ENST00000622183 BHLHE23Q8NDY6 225 aa3.7□□□□□ -1.82
CPNE3-213ENST00000622183 OR5D13Q8NGL4 314 aa3.7□□□□□ -1.82
CPNE3-213ENST00000622183 NPAS2Q99743 824 aa3.7□□□□□ -1.82
CPNE3-213ENST00000622183 PAXXQ9BUH6 204 aa3.7□□□□□ -1.82
CPNE3-213ENST00000622183 SPATA16Q9BXB7 569 aa3.7□□□□□ -1.82
CPNE3-213ENST00000622183 CAPS2Q9BXY5 557 aa3.7□□□□□ -1.82
CPNE3-213ENST00000622183 NAT10Q9H0A0 1025 aaKnown RBP3.7□□□□□ -1.82
CPNE3-213ENST00000622183 ZNF385DQ9H6B1 395 aa3.7□□□□□ -1.82
CPNE3-213ENST00000622183 NUDT15Q9NV35 164 aa3.7□□□□□ -1.82
CPNE3-213ENST00000622183 B3GNT2Q9NY97 397 aa3.7□□□□□ -1.82
CPNE3-213ENST00000622183 POLDIP2Q9Y2S7 368 aa3.7□□□□□ -1.82
CPNE3-213ENST00000622183 PPIAL4AQ9Y536 164 aa3.7□□□□□ -1.82
CPNE3-213ENST00000622183 ANKRD30BQ9BXX2 1392 aa3.7□□□□□ -1.82
CPNE3-213ENST00000622183 DHRS7CA6NNS2 312 aa3.69□□□□□ -1.82
CPNE3-213ENST00000622183 ZNF705EA8MWA4 302 aaPredicted RBP3.69□□□□□ -1.82
CPNE3-213ENST00000622183 PRKYO43930 277 aa3.69□□□□□ -1.82
CPNE3-213ENST00000622183 SNX4O95219 450 aa3.69□□□□□ -1.82
CPNE3-213ENST00000622183 THY1P04216 161 aa3.69□□□□□ -1.82
CPNE3-213ENST00000622183 ALOX5P09917 674 aa3.69□□□□□ -1.82
CPNE3-213ENST00000622183 HSMCR30P0CW71 290 aa3.69□□□□□ -1.82
CPNE3-213ENST00000622183 TDO2P48775 406 aa3.69□□□□□ -1.82
CPNE3-213ENST00000622183 PRKXP51817 358 aa3.69□□□□□ -1.82
CPNE3-213ENST00000622183 EFNB2P52799 333 aa3.69□□□□□ -1.82
CPNE3-213ENST00000622183 KRTAP10-9P60411 292 aa3.69□□□□□ -1.82
CPNE3-213ENST00000622183 TNFRSF17Q02223 184 aa3.69□□□□□ -1.82
CPNE3-213ENST00000622183 OC90Q02509 493 aaPredicted RBP3.69□□□□□ -1.82
CPNE3-213ENST00000622183 LRRC74AQ0VAA2 488 aa3.69□□□□□ -1.82
CPNE3-213ENST00000622183 CUL1Q13616 776 aa3.69□□□□□ -1.82
CPNE3-213ENST00000622183 GSG1Q2KHT4 349 aa3.69□□□□□ -1.82
CPNE3-213ENST00000622183 UTF1Q5T230 341 aa3.69□□□□□ -1.82
CPNE3-213ENST00000622183 MARC1Q5VT66 337 aa3.69□□□□□ -1.82
CPNE3-213ENST00000622183 OR4D9Q8NGE8 314 aa3.69□□□□□ -1.82
CPNE3-213ENST00000622183 OR13C2Q8NGS9 318 aa3.69□□□□□ -1.82
CPNE3-213ENST00000622183 MRPS31Q92665 395 aaKnown RBP3.69□□□□□ -1.82
CPNE3-213ENST00000622183 C19orf24Q9BVV8 132 aa3.69□□□□□ -1.82
CPNE3-213ENST00000622183 SMYD3Q9H7B4 428 aa3.69□□□□□ -1.82
CPNE3-213ENST00000622183 NANSQ9NR45 359 aa3.69□□□□□ -1.82
CPNE3-213ENST00000622183 OR1A1Q9P1Q5 309 aa3.69□□□□□ -1.82
CPNE3-213ENST00000622183 CDH9Q9ULB4 789 aa3.69□□□□□ -1.82
CPNE3-213ENST00000622183 MEMO1Q9Y316 297 aa3.69□□□□□ -1.82
CPNE3-213ENST00000622183 RRP15Q9Y3B9 282 aaKnown RBP3.69□□□□□ -1.82
CPNE3-213ENST00000622183 TIMM10BQ9Y5J6 103 aa3.69□□□□□ -1.82
CPNE3-213ENST00000622183 FLVCR1Q9Y5Y0 555 aa3.69□□□□□ -1.82
CPNE3-213ENST00000622183 TDRD15B5MCY1 1934 aaKnown RBP3.68□□□□□ -1.82
CPNE3-213ENST00000622183 PNPLA6Q8IY17 1366 aa3.68□□□□□ -1.82
CPNE3-213ENST00000622183 A0A1B0GWB2 263 aa3.68□□□□□ -1.82
CPNE3-213ENST00000622183 PCP4L1A6NKN8 68 aa3.68□□□□□ -1.82
CPNE3-213ENST00000622183 TRIM64CA6NLI5 447 aa3.68□□□□□ -1.82
CPNE3-213ENST00000622183 SULT2B1O00204 365 aa3.68□□□□□ -1.82
CPNE3-213ENST00000622183 B4GALT2O60909 372 aa3.68□□□□□ -1.82
CPNE3-213ENST00000622183 ZNF254O75437 659 aa3.68□□□□□ -1.82
CPNE3-213ENST00000622183 POU2F1P14859 743 aa3.68□□□□□ -1.82
CPNE3-213ENST00000622183 RPS2P15880 293 aaKnown RBP3.68□□□□□ -1.82
CPNE3-213ENST00000622183 ZP3P21754 424 aa3.68□□□□□ -1.82
CPNE3-213ENST00000622183 YWHABP31946 246 aaKnown RBP3.68□□□□□ -1.82
CPNE3-213ENST00000622183 CCT3P49368 545 aaKnown RBP3.68□□□□□ -1.82
CPNE3-213ENST00000622183 MEOX2P50222 304 aa3.68□□□□□ -1.82
CPNE3-213ENST00000622183 HNRNPA3P51991 378 aaKnown RBP3.68□□□□□ -1.82
CPNE3-213ENST00000622183 HSPA2P54652 639 aa3.68□□□□□ -1.82
CPNE3-213ENST00000622183 ZMYND11Q15326 602 aa3.68□□□□□ -1.82
CPNE3-213ENST00000622183 PRR4Q16378 134 aa3.68□□□□□ -1.82
CPNE3-213ENST00000622183 SFT2D3Q587I9 215 aa3.68□□□□□ -1.82
CPNE3-213ENST00000622183 TPGS2Q68CL5 300 aa3.68□□□□□ -1.82
CPNE3-213ENST00000622183 OR4F3Q6IEY1 312 aa3.68□□□□□ -1.82
CPNE3-213ENST00000622183 HPS6Q86YV9 775 aa3.68□□□□□ -1.82
CPNE3-213ENST00000622183 CCDC50Q8IVM0 306 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms