RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 OOSP2Q86WS3 158 aa8.71□□□□□ -1.01
PDPN-212ENST00000621990 TMEM99Q8N816 258 aa8.71□□□□□ -1.01
PDPN-212ENST00000621990 ACOT12Q8WYK0 555 aa8.71□□□□□ -1.01
PDPN-212ENST00000621990 CNOT9Q92600 299 aaKnown RBP8.71□□□□□ -1.01
PDPN-212ENST00000621990 VSTM2LQ96N03 204 aa8.71□□□□□ -1.01
PDPN-212ENST00000621990 UBL7Q96S82 380 aaPredicted RBP8.71□□□□□ -1.01
PDPN-212ENST00000621990 TEAD3Q99594 435 aa8.71□□□□□ -1.01
PDPN-212ENST00000621990 MED20Q9H944 212 aa8.71□□□□□ -1.01
PDPN-212ENST00000621990 TMEM27Q9HBJ8 222 aa8.71□□□□□ -1.01
PDPN-212ENST00000621990 FAM60AQ9NP50 221 aa8.71□□□□□ -1.01
PDPN-212ENST00000621990 A0A1B0GWA3 101 aa8.71□□□□□ -1.02
PDPN-212ENST00000621990 BLACEA4D250 179 aa8.71□□□□□ -1.02
PDPN-212ENST00000621990 FOXS1O43638 330 aa8.71□□□□□ -1.02
PDPN-212ENST00000621990 PLPP2O43688 288 aa8.71□□□□□ -1.02
PDPN-212ENST00000621990 RDH16O75452 317 aa8.71□□□□□ -1.02
PDPN-212ENST00000621990 LTBRP36941 435 aa8.71□□□□□ -1.02
PDPN-212ENST00000621990 ZNF141Q15928 474 aa8.71□□□□□ -1.02
PDPN-212ENST00000621990 PYDC2Q56P42 97 aa8.71□□□□□ -1.02
PDPN-212ENST00000621990 KIAA0895LQ68EN5 471 aa8.71□□□□□ -1.02
PDPN-212ENST00000621990 GPALPP1Q8IXQ4 340 aa8.71□□□□□ -1.02
PDPN-212ENST00000621990 LRFN5Q96NI6 719 aa8.71□□□□□ -1.02
PDPN-212ENST00000621990 NECTIN4Q96NY8 510 aa8.71□□□□□ -1.02
PDPN-212ENST00000621990 KCNJ15Q99712 375 aa8.71□□□□□ -1.02
PDPN-212ENST00000621990 IFT27Q9BW83 186 aa8.71□□□□□ -1.02
PDPN-212ENST00000621990 TRIM2Q9C040 744 aa8.71□□□□□ -1.02
PDPN-212ENST00000621990 FOLH1BQ9HBA9 442 aa8.71□□□□□ -1.02
PDPN-212ENST00000621990 ADGRL4Q9HBW9 690 aa8.71□□□□□ -1.02
PDPN-212ENST00000621990 TRIM36Q9NQ86 728 aa8.71□□□□□ -1.02
PDPN-212ENST00000621990 CD207Q9UJ71 328 aa8.71□□□□□ -1.02
PDPN-212ENST00000621990 ZMIZ1Q9ULJ6 1067 aa8.71□□□□□ -1.02
PDPN-212ENST00000621990 NDRG2Q9UN36 371 aaKnown RBP8.71□□□□□ -1.02
PDPN-212ENST00000621990 PCDHGB7Q9Y5F8 929 aa8.71□□□□□ -1.02
PDPN-212ENST00000621990 ZC3H12DA2A288 527 aaKnown RBP8.7□□□□□ -1.02
PDPN-212ENST00000621990 MEIOCA2RUB1 952 aa8.7□□□□□ -1.02
PDPN-212ENST00000621990 SMIM30A4D0T7 59 aa8.7□□□□□ -1.02
PDPN-212ENST00000621990 B4DXG7 233 aa8.7□□□□□ -1.02
PDPN-212ENST00000621990 PRR23D1E9PI22 279 aaPredicted RBP8.7□□□□□ -1.02
PDPN-212ENST00000621990 HPGDSO60760 199 aa8.7□□□□□ -1.02
PDPN-212ENST00000621990 SC5DO75845 299 aa8.7□□□□□ -1.02
PDPN-212ENST00000621990 IGKV1D-16P01601 117 aa8.7□□□□□ -1.02
PDPN-212ENST00000621990 CTSBP07858 339 aa8.7□□□□□ -1.02
PDPN-212ENST00000621990 NGFRP08138 427 aa8.7□□□□□ -1.02
PDPN-212ENST00000621990 PRR23D2P0DMB1 279 aaPredicted RBP8.7□□□□□ -1.02
PDPN-212ENST00000621990 PEPDP12955 493 aa8.7□□□□□ -1.02
PDPN-212ENST00000621990 ST6GAL1P15907 406 aa8.7□□□□□ -1.02
PDPN-212ENST00000621990 SSTR4P31391 388 aa8.7□□□□□ -1.02
PDPN-212ENST00000621990 TRAM1Q15629 374 aa8.7□□□□□ -1.02
PDPN-212ENST00000621990 TAB1Q15750 504 aa8.7□□□□□ -1.02
PDPN-212ENST00000621990 ATAD3CQ5T2N8 411 aa8.7□□□□□ -1.02
PDPN-212ENST00000621990 MZT2AQ6P582 158 aa8.7□□□□□ -1.02
PDPN-212ENST00000621990 B3GLCTQ6Y288 498 aa8.7□□□□□ -1.02
PDPN-212ENST00000621990 NR2C2APQ86WQ0 139 aa8.7□□□□□ -1.02
PDPN-212ENST00000621990 OR9A4Q8NGU2 314 aa8.7□□□□□ -1.02
PDPN-212ENST00000621990 ZNF486Q96H40 463 aaPredicted RBP8.7□□□□□ -1.02
PDPN-212ENST00000621990 ST6GAL2Q96JF0 529 aa8.7□□□□□ -1.02
PDPN-212ENST00000621990 CCDC3Q9BQI4 270 aa8.7□□□□□ -1.02
PDPN-212ENST00000621990 MCCC2Q9HCC0 563 aa8.7□□□□□ -1.02
PDPN-212ENST00000621990 STARD5Q9NSY2 213 aa8.7□□□□□ -1.02
PDPN-212ENST00000621990 COMMD3Q9UBI1 195 aa8.7□□□□□ -1.02
PDPN-212ENST00000621990 SERTAD3Q9UJW9 196 aa8.7□□□□□ -1.02
PDPN-212ENST00000621990 ZNF221Q9UK13 617 aa8.7□□□□□ -1.02
PDPN-212ENST00000621990 TRAV27A0A087WT01 109 aa8.7□□□□□ -1.02
PDPN-212ENST00000621990 DAPL1A0PJW8 107 aa8.7□□□□□ -1.02
PDPN-212ENST00000621990 HMX3A6NHT5 357 aa8.7□□□□□ -1.02
PDPN-212ENST00000621990 CD8B2A6NJW9 211 aa8.7□□□□□ -1.02
PDPN-212ENST00000621990 RIIAD1A6NNX1 92 aa8.7□□□□□ -1.02
PDPN-212ENST00000621990 TGFBR3LH3BV60 316 aa8.7□□□□□ -1.02
PDPN-212ENST00000621990 HRO43593 1189 aa8.7□□□□□ -1.02
PDPN-212ENST00000621990 SLC19A2O60779 497 aa8.7□□□□□ -1.02
PDPN-212ENST00000621990 NCR1O76036 304 aa8.7□□□□□ -1.02
PDPN-212ENST00000621990 MT-ND5P03915 603 aa8.7□□□□□ -1.02
PDPN-212ENST00000621990 SBK2P0C263 348 aa8.7□□□□□ -1.02
PDPN-212ENST00000621990 FAM157BP0CG42 384 aa8.7□□□□□ -1.02
PDPN-212ENST00000621990 SAGP10523 405 aaPredicted RBP8.7□□□□□ -1.02
PDPN-212ENST00000621990 CD8BP10966 210 aa8.7□□□□□ -1.02
PDPN-212ENST00000621990 F8A1P23610 371 aa8.7□□□□□ -1.02
PDPN-212ENST00000621990 HHEXQ03014 270 aa8.7□□□□□ -1.02
PDPN-212ENST00000621990 FGFBP1Q14512 234 aa8.7□□□□□ -1.02
PDPN-212ENST00000621990 LCN1P1Q5VSP4 162 aa8.7□□□□□ -1.02
PDPN-212ENST00000621990 RTL4Q6ZR62 310 aa8.7□□□□□ -1.02
PDPN-212ENST00000621990 TRILQ7L0X0 811 aa8.7□□□□□ -1.02
PDPN-212ENST00000621990 PXKQ7Z7A4 578 aa8.7□□□□□ -1.02
PDPN-212ENST00000621990 C19orf47Q8N9M1 422 aaKnown RBP8.7□□□□□ -1.02
PDPN-212ENST00000621990 SMRP1Q8NCR6 262 aa8.7□□□□□ -1.02
PDPN-212ENST00000621990 OR5W2Q8NH69 310 aa8.7□□□□□ -1.02
PDPN-212ENST00000621990 KCTD12Q96CX2 325 aaKnown RBP8.7□□□□□ -1.02
PDPN-212ENST00000621990 PHOX2BQ99453 314 aa8.7□□□□□ -1.02
PDPN-212ENST00000621990 NEK6Q9HC98 313 aa8.7□□□□□ -1.02
PDPN-212ENST00000621990 B3GAT2Q9NPZ5 323 aa8.7□□□□□ -1.02
PDPN-212ENST00000621990 CLDN16Q9Y5I7 305 aa8.7□□□□□ -1.02
PDPN-212ENST00000621990 C2orf92A0A1B0GVN3 265 aa8.69□□□□□ -1.02
PDPN-212ENST00000621990 DVL2O14641 736 aa8.69□□□□□ -1.02
PDPN-212ENST00000621990 RGS13O14921 159 aa8.69□□□□□ -1.02
PDPN-212ENST00000621990 OR10H2O60403 315 aa8.69□□□□□ -1.02
PDPN-212ENST00000621990 SLC2A2P11168 524 aaPredicted RBP8.69□□□□□ -1.02
PDPN-212ENST00000621990 GLULP15104 373 aa8.69□□□□□ -1.02
PDPN-212ENST00000621990 ZNF3P17036 446 aa8.69□□□□□ -1.02
PDPN-212ENST00000621990 APEX1P27695 318 aaKnown RBP8.69□□□□□ -1.02
PDPN-212ENST00000621990 NOS3P29474 1203 aa8.69□□□□□ -1.02
PDPN-212ENST00000621990 KIR2DL3P43628 341 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms