RNA–Protein interactions for RNA: ENST00000621728.4

SEMA6C-210, Transcript of semaphorin 6C, humanhuman

TSL 1 (best) BASIC

Gene SEMA6C, Length 1,918 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-210ENST00000621728 NIPSNAP1Q9BPW8 284 aa17.02■□□□□ 0.32
SEMA6C-210ENST00000621728 TOR3AQ9H497 397 aa17.02■□□□□ 0.32
SEMA6C-210ENST00000621728 GALNT9Q9HCQ5 603 aa17.02■□□□□ 0.32
SEMA6C-210ENST00000621728 KIF17Q9P2E2 1029 aa17.02■□□□□ 0.32
SEMA6C-210ENST00000621728 TESQ9UGI8 421 aaKnown RBP17.02■□□□□ 0.32
SEMA6C-210ENST00000621728 SLC35A3Q9Y2D2 325 aa17.02■□□□□ 0.32
SEMA6C-210ENST00000621728 HRH3Q9Y5N1 445 aa17.02■□□□□ 0.32
SEMA6C-210ENST00000621728 ALG1L2C9J202 215 aa17.02■□□□□ 0.31
SEMA6C-210ENST00000621728 ANGPTL1O95841 491 aa17.02■□□□□ 0.31
SEMA6C-210ENST00000621728 IGFBP5P24593 272 aa17.02■□□□□ 0.31
SEMA6C-210ENST00000621728 LCN1P31025 176 aa17.02■□□□□ 0.31
SEMA6C-210ENST00000621728 ADH7P40394 386 aa17.02■□□□□ 0.31
SEMA6C-210ENST00000621728 CCR4P51679 360 aa17.02■□□□□ 0.31
SEMA6C-210ENST00000621728 EFR3AQ14156 821 aa17.02■□□□□ 0.31
SEMA6C-210ENST00000621728 RBM48Q5RL73 367 aaKnown RBP17.02■□□□□ 0.31
SEMA6C-210ENST00000621728 KDM4DQ6B0I6 523 aa17.02■□□□□ 0.31
SEMA6C-210ENST00000621728 ZNF770Q6IQ21 691 aaPredicted RBP17.02■□□□□ 0.31
SEMA6C-210ENST00000621728 RPS19BP1Q86WX3 136 aaKnown RBP17.02■□□□□ 0.31
SEMA6C-210ENST00000621728 ZNF420Q8TAQ5 688 aaPredicted RBP17.02■□□□□ 0.31
SEMA6C-210ENST00000621728 RNF217Q8TC41 542 aa17.02■□□□□ 0.31
SEMA6C-210ENST00000621728 GTPBP3Q969Y2 492 aaKnown RBP17.02■□□□□ 0.31
SEMA6C-210ENST00000621728 TMCC3Q9ULS5 477 aa17.02■□□□□ 0.31
SEMA6C-210ENST00000621728 A0A087WUU8 490 aa17.01■□□□□ 0.31
SEMA6C-210ENST00000621728 SH3PXD2BA1X283 911 aa17.01■□□□□ 0.31
SEMA6C-210ENST00000621728 B4DXG7 233 aa17.01■□□□□ 0.31
SEMA6C-210ENST00000621728 H3BSA7 217 aa17.01■□□□□ 0.31
SEMA6C-210ENST00000621728 ZNF264O43296 627 aa17.01■□□□□ 0.31
SEMA6C-210ENST00000621728 NDUFB5O43674 189 aa17.01■□□□□ 0.31
SEMA6C-210ENST00000621728 OR5F1O95221 314 aa17.01■□□□□ 0.31
SEMA6C-210ENST00000621728 CLIC3O95833 236 aa17.01■□□□□ 0.31
SEMA6C-210ENST00000621728 GASTP01350 101 aa17.01■□□□□ 0.31
SEMA6C-210ENST00000621728 NGFRP08138 427 aa17.01■□□□□ 0.31
SEMA6C-210ENST00000621728 IL18R1Q13478 541 aa17.01■□□□□ 0.31
SEMA6C-210ENST00000621728 ZNF468Q5VIY5 522 aaPredicted RBP17.01■□□□□ 0.31
SEMA6C-210ENST00000621728 OR5M10Q6IEU7 315 aa17.01■□□□□ 0.31
SEMA6C-210ENST00000621728 IL20RBQ6UXL0 311 aa17.01■□□□□ 0.31
SEMA6C-210ENST00000621728 CADM2Q8N3J6 435 aa17.01■□□□□ 0.31
SEMA6C-210ENST00000621728 AQP11Q8NBQ7 271 aa17.01■□□□□ 0.31
SEMA6C-210ENST00000621728 ZNF555Q8NEP9 628 aa17.01■□□□□ 0.31
SEMA6C-210ENST00000621728 TMEM255BQ8WV15 326 aa17.01■□□□□ 0.31
SEMA6C-210ENST00000621728 NACC2Q96BF6 587 aa17.01■□□□□ 0.31
SEMA6C-210ENST00000621728 SPACA9Q96E40 222 aaPredicted RBP17.01■□□□□ 0.31
SEMA6C-210ENST00000621728 ZNF559Q9BR84 538 aa17.01■□□□□ 0.31
SEMA6C-210ENST00000621728 A0A1B0GWA3 101 aa17■□□□□ 0.31
SEMA6C-210ENST00000621728 TRAPPC13A5PLN9 417 aa17■□□□□ 0.31
SEMA6C-210ENST00000621728 PIP5K1CO60331 668 aa17■□□□□ 0.31
SEMA6C-210ENST00000621728 TRMUO75648 421 aaKnown RBP17■□□□□ 0.31
SEMA6C-210ENST00000621728 SERPINA7P05543 415 aa17■□□□□ 0.31
SEMA6C-210ENST00000621728 CBLP22681 906 aa17■□□□□ 0.31
SEMA6C-210ENST00000621728 MLF1P58340 268 aa17■□□□□ 0.31
SEMA6C-210ENST00000621728 PSPHP78330 225 aa17■□□□□ 0.31
SEMA6C-210ENST00000621728 ST3GAL3Q11203 375 aa17■□□□□ 0.31
SEMA6C-210ENST00000621728 TOP3AQ13472 1001 aaPredicted RBP17■□□□□ 0.31
SEMA6C-210ENST00000621728 TRAM2Q15035 370 aa17■□□□□ 0.31
SEMA6C-210ENST00000621728 ZNF791Q3KP31 576 aaPredicted RBP17■□□□□ 0.31
SEMA6C-210ENST00000621728 ISLR2Q6UXK2 745 aa17■□□□□ 0.31
SEMA6C-210ENST00000621728 ZNF550Q7Z398 422 aa17■□□□□ 0.31
SEMA6C-210ENST00000621728 THAP5Q7Z6K1 395 aa17■□□□□ 0.31
SEMA6C-210ENST00000621728 PSMF1Q92530 271 aa17■□□□□ 0.31
SEMA6C-210ENST00000621728 THOC3Q96J01 351 aaKnown RBP17■□□□□ 0.31
SEMA6C-210ENST00000621728 PRSS27Q9BQR3 290 aa17■□□□□ 0.31
SEMA6C-210ENST00000621728 MED13Q9UHV7 2174 aa17■□□□□ 0.31
SEMA6C-210ENST00000621728 A0A1W2PQD3 144 aa17■□□□□ 0.31
SEMA6C-210ENST00000621728 FAAHO00519 579 aa17■□□□□ 0.31
SEMA6C-210ENST00000621728 HCRTR2O43614 444 aa17■□□□□ 0.31
SEMA6C-210ENST00000621728 OR10H3O60404 316 aa17■□□□□ 0.31
SEMA6C-210ENST00000621728 FMO6PO60774 539 aa17■□□□□ 0.31
SEMA6C-210ENST00000621728 ICAM2P13598 275 aa17■□□□□ 0.31
SEMA6C-210ENST00000621728 NAGAP17050 411 aa17■□□□□ 0.31
SEMA6C-210ENST00000621728 SMIM11AP58511 58 aa17■□□□□ 0.31
SEMA6C-210ENST00000621728 CHAF1BQ13112 559 aa17■□□□□ 0.31
SEMA6C-210ENST00000621728 NTRK2Q16620 822 aa17■□□□□ 0.31
SEMA6C-210ENST00000621728 DCAF10Q5QP82 559 aa17■□□□□ 0.31
SEMA6C-210ENST00000621728 NUP54Q7Z3B4 507 aa17■□□□□ 0.31
SEMA6C-210ENST00000621728 C8orf59Q8N0T1 100 aaPredicted RBP17■□□□□ 0.31
SEMA6C-210ENST00000621728 OR4K5Q8NGD3 323 aa17■□□□□ 0.31
SEMA6C-210ENST00000621728 KRT84Q9NSB2 600 aa17■□□□□ 0.31
SEMA6C-210ENST00000621728 ANKRD10Q9NXR5 420 aa17■□□□□ 0.31
SEMA6C-210ENST00000621728 YARS2Q9Y2Z4 477 aaKnown RBP17■□□□□ 0.31
SEMA6C-210ENST00000621728 GNB5O14775 395 aa16.99■□□□□ 0.31
SEMA6C-210ENST00000621728 NKX2-8O15522 239 aa16.99■□□□□ 0.31
SEMA6C-210ENST00000621728 WISP1O95388 367 aa16.99■□□□□ 0.31
SEMA6C-210ENST00000621728 PRKAR1AP10644 381 aa16.99■□□□□ 0.31
SEMA6C-210ENST00000621728 EPHA2P29317 976 aa16.99■□□□□ 0.31
SEMA6C-210ENST00000621728 PTGDSP41222 190 aa16.99■□□□□ 0.31
SEMA6C-210ENST00000621728 SSR4P51571 173 aa16.99■□□□□ 0.31
SEMA6C-210ENST00000621728 RAD23AP54725 363 aa16.99■□□□□ 0.31
SEMA6C-210ENST00000621728 KCNAB2Q13303 367 aa16.99■□□□□ 0.31
SEMA6C-210ENST00000621728 PGBD2Q6P3X8 592 aa16.99■□□□□ 0.31
SEMA6C-210ENST00000621728 DUSP19Q8WTR2 217 aa16.99■□□□□ 0.31
SEMA6C-210ENST00000621728 ASB15Q8WXK1 588 aa16.99■□□□□ 0.31
SEMA6C-210ENST00000621728 HDAC2Q92769 488 aaKnown RBP16.99■□□□□ 0.31
SEMA6C-210ENST00000621728 TMCO6Q96DC7 493 aa16.99■□□□□ 0.31
SEMA6C-210ENST00000621728 GPA33Q99795 319 aa16.99■□□□□ 0.31
SEMA6C-210ENST00000621728 FAM117AQ9C073 453 aa16.99■□□□□ 0.31
SEMA6C-210ENST00000621728 RIBC2Q9H4K1 309 aa16.99■□□□□ 0.31
SEMA6C-210ENST00000621728 TMEM27Q9HBJ8 222 aa16.99■□□□□ 0.31
SEMA6C-210ENST00000621728 BLOC1S6Q9UL45 172 aa16.99■□□□□ 0.31
SEMA6C-210ENST00000621728 ORC6Q9Y5N6 252 aa16.99■□□□□ 0.31
SEMA6C-210ENST00000621728 A0A0B4J2E0 115 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms