RNA–Protein interactions for RNA: ENST00000621676.4

VPS11-208, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS11, Length 3,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-208ENST00000621676 C19orf57Q0VDD7 668 aa9.67□□□□□ -0.86
VPS11-208ENST00000621676 TRAM2Q15035 370 aa9.67□□□□□ -0.86
VPS11-208ENST00000621676 ALKBH2Q6NS38 261 aa9.67□□□□□ -0.86
VPS11-208ENST00000621676 RPTNQ6XPR3 784 aa9.67□□□□□ -0.86
VPS11-208ENST00000621676 LNX2Q8N448 690 aa9.67□□□□□ -0.86
VPS11-208ENST00000621676 OR52E2Q8NGJ4 325 aa9.67□□□□□ -0.86
VPS11-208ENST00000621676 ERMAPQ96PL5 475 aaPredicted RBP9.67□□□□□ -0.86
VPS11-208ENST00000621676 CMKLR1Q99788 373 aa9.67□□□□□ -0.86
VPS11-208ENST00000621676 EMC6Q9BV81 110 aa9.67□□□□□ -0.86
VPS11-208ENST00000621676 FUNDC2Q9BWH2 189 aa9.67□□□□□ -0.86
VPS11-208ENST00000621676 DEFB126Q9BYW3 111 aa9.67□□□□□ -0.86
VPS11-208ENST00000621676 TMEM45AQ9NWC5 275 aa9.67□□□□□ -0.86
VPS11-208ENST00000621676 LIPT1Q9Y234 373 aa9.67□□□□□ -0.86
VPS11-208ENST00000621676 PKDREJQ9NTG1 2253 aa9.67□□□□□ -0.86
VPS11-208ENST00000621676 ACACBO00763 2458 aa9.67□□□□□ -0.86
VPS11-208ENST00000621676 CADP27708 2225 aa9.67□□□□□ -0.86
VPS11-208ENST00000621676 CDHR4A6H8M9 788 aa9.67□□□□□ -0.86
VPS11-208ENST00000621676 ELOA3DA6NLF2 546 aaPredicted RBP9.67□□□□□ -0.86
VPS11-208ENST00000621676 NOL3O60936 208 aaKnown RBP9.67□□□□□ -0.86
VPS11-208ENST00000621676 DNAJB5O75953 348 aa9.67□□□□□ -0.86
VPS11-208ENST00000621676 IL11P20809 199 aa9.67□□□□□ -0.86
VPS11-208ENST00000621676 ARHGAP11BQ3KRB8 267 aa9.67□□□□□ -0.86
VPS11-208ENST00000621676 ELOA3BQ3SY89 546 aa9.67□□□□□ -0.86
VPS11-208ENST00000621676 METAP1DQ6UB28 335 aaPredicted RBP9.67□□□□□ -0.86
VPS11-208ENST00000621676 TMEM156Q8N614 296 aa9.67□□□□□ -0.86
VPS11-208ENST00000621676 ELOA3Q8NG57 546 aa9.67□□□□□ -0.86
VPS11-208ENST00000621676 OR4C15Q8NGM1 316 aa9.67□□□□□ -0.86
VPS11-208ENST00000621676 MOGAT1Q96PD6 335 aa9.67□□□□□ -0.86
VPS11-208ENST00000621676 GAL3ST1Q99999 423 aa9.67□□□□□ -0.86
VPS11-208ENST00000621676 OR52D1Q9H346 318 aa9.67□□□□□ -0.86
VPS11-208ENST00000621676 ZSCAN32Q9NX65 697 aa9.67□□□□□ -0.86
VPS11-208ENST00000621676 PLA2G3Q9NZ20 509 aa9.67□□□□□ -0.86
VPS11-208ENST00000621676 POFUT2Q9Y2G5 429 aa9.67□□□□□ -0.86
VPS11-208ENST00000621676 HRH3Q9Y5N1 445 aa9.67□□□□□ -0.86
VPS11-208ENST00000621676 TP53BP1Q12888 1972 aaPredicted RBP9.67□□□□□ -0.86
VPS11-208ENST00000621676 A0A1W2PNR3 127 aa9.66□□□□□ -0.86
VPS11-208ENST00000621676 RPP14O95059 124 aaKnown RBP9.66□□□□□ -0.86
VPS11-208ENST00000621676 TACR3P29371 465 aa9.66□□□□□ -0.86
VPS11-208ENST00000621676 PYCR1P32322 319 aa9.66□□□□□ -0.86
VPS11-208ENST00000621676 FHL5Q5TD97 284 aa9.66□□□□□ -0.86
VPS11-208ENST00000621676 CARD17Q5XLA6 110 aa9.66□□□□□ -0.86
VPS11-208ENST00000621676 MYO7BQ6PIF6 2116 aa9.66□□□□□ -0.86
VPS11-208ENST00000621676 UBE2J2Q8N2K1 259 aa9.66□□□□□ -0.86
VPS11-208ENST00000621676 NDNFQ8TB73 568 aa9.66□□□□□ -0.86
VPS11-208ENST00000621676 DAZLQ92904 295 aaKnown RBP9.66□□□□□ -0.86
VPS11-208ENST00000621676 ISOC1Q96CN7 298 aa9.66□□□□□ -0.86
VPS11-208ENST00000621676 SLC41A2Q96JW4 573 aa9.66□□□□□ -0.86
VPS11-208ENST00000621676 PRRC1Q96M27 445 aa9.66□□□□□ -0.86
VPS11-208ENST00000621676 NMNAT3Q96T66 252 aa9.66□□□□□ -0.86
VPS11-208ENST00000621676 EPYCQ99645 322 aa9.66□□□□□ -0.86
VPS11-208ENST00000621676 PINK1Q9BXM7 581 aa9.66□□□□□ -0.86
VPS11-208ENST00000621676 PRDM9Q9NQV7 894 aa9.66□□□□□ -0.86
VPS11-208ENST00000621676 TSC22D4Q9Y3Q8 395 aa9.66□□□□□ -0.86
VPS11-208ENST00000621676 LOXL2Q9Y4K0 774 aa9.66□□□□□ -0.86
VPS11-208ENST00000621676 PCDHGA10Q9Y5H3 936 aa9.66□□□□□ -0.86
VPS11-208ENST00000621676 IER3IP1Q9Y5U9 82 aa9.66□□□□□ -0.86
VPS11-208ENST00000621676 ABCA4P78363 2273 aa9.66□□□□□ -0.86
VPS11-208ENST00000621676 DVL2O14641 736 aa9.66□□□□□ -0.86
VPS11-208ENST00000621676 RGS5O15539 181 aa9.66□□□□□ -0.86
VPS11-208ENST00000621676 STK17BO94768 372 aa9.66□□□□□ -0.86
VPS11-208ENST00000621676 OXSR1O95747 527 aaPredicted RBP9.66□□□□□ -0.86
VPS11-208ENST00000621676 CD36P16671 472 aa9.66□□□□□ -0.86
VPS11-208ENST00000621676 NUDT1P36639 197 aa9.66□□□□□ -0.86
VPS11-208ENST00000621676 HSD17B7P56937 341 aa9.66□□□□□ -0.86
VPS11-208ENST00000621676 ACY1Q03154 408 aa9.66□□□□□ -0.86
VPS11-208ENST00000621676 DSG2Q14126 1118 aa9.66□□□□□ -0.86
VPS11-208ENST00000621676 GNA13Q14344 377 aa9.66□□□□□ -0.86
VPS11-208ENST00000621676 TSTQ16762 297 aaKnown RBP9.66□□□□□ -0.86
VPS11-208ENST00000621676 XAF1Q6GPH4 301 aa9.66□□□□□ -0.86
VPS11-208ENST00000621676 MDGA2Q7Z553 956 aa9.66□□□□□ -0.86
VPS11-208ENST00000621676 SAMD14Q8IZD0 417 aaPredicted RBP9.66□□□□□ -0.86
VPS11-208ENST00000621676 CDK20Q8IZL9 346 aa9.66□□□□□ -0.86
VPS11-208ENST00000621676 PACRGLQ8N7B6 248 aa9.66□□□□□ -0.86
VPS11-208ENST00000621676 OR4Q3Q8NH05 313 aa9.66□□□□□ -0.86
VPS11-208ENST00000621676 ZPLD1Q8TCW7 415 aa9.66□□□□□ -0.86
VPS11-208ENST00000621676 ADAMTS18Q8TE60 1221 aa9.66□□□□□ -0.86
VPS11-208ENST00000621676 TM9SF2Q99805 663 aa9.66□□□□□ -0.86
VPS11-208ENST00000621676 C6orf62Q9GZU0 229 aaPredicted RBP9.66□□□□□ -0.86
VPS11-208ENST00000621676 ZNF350Q9GZX5 532 aa9.66□□□□□ -0.86
VPS11-208ENST00000621676 METTL7AQ9H8H3 244 aa9.66□□□□□ -0.86
VPS11-208ENST00000621676 RSL24D1Q9UHA3 163 aaKnown RBP9.66□□□□□ -0.86
VPS11-208ENST00000621676 NDRG4Q9ULP0 352 aaKnown RBP9.66□□□□□ -0.86
VPS11-208ENST00000621676 ZNF318Q5VUA4 2279 aa9.66□□□□□ -0.86
VPS11-208ENST00000621676 IGHV3-15A0A0B4J1V0 119 aa9.66□□□□□ -0.86
VPS11-208ENST00000621676 SEC14L5O43304 696 aa9.66□□□□□ -0.86
VPS11-208ENST00000621676 COQ9O75208 318 aa9.66□□□□□ -0.86
VPS11-208ENST00000621676 DDAH2O95865 285 aa9.66□□□□□ -0.86
VPS11-208ENST00000621676 SEMG1P04279 462 aa9.66□□□□□ -0.86
VPS11-208ENST00000621676 OSMP13725 252 aa9.66□□□□□ -0.86
VPS11-208ENST00000621676 F8A1P23610 371 aa9.66□□□□□ -0.86
VPS11-208ENST00000621676 LIPAP38571 399 aa9.66□□□□□ -0.86
VPS11-208ENST00000621676 MELKQ14680 651 aa9.66□□□□□ -0.86
VPS11-208ENST00000621676 RSPO4Q2I0M5 234 aaPredicted RBP9.66□□□□□ -0.86
VPS11-208ENST00000621676 SYT9Q86SS6 491 aa9.66□□□□□ -0.86
VPS11-208ENST00000621676 ZNF511Q8NB15 262 aa9.66□□□□□ -0.86
VPS11-208ENST00000621676 MOSPD2Q8NHP6 518 aa9.66□□□□□ -0.86
VPS11-208ENST00000621676 DGCR14Q96DF8 476 aaKnown RBP9.66□□□□□ -0.86
VPS11-208ENST00000621676 KTI12Q96EK9 354 aaPredicted RBP9.66□□□□□ -0.86
VPS11-208ENST00000621676 Q96MT0 163 aa9.66□□□□□ -0.86
VPS11-208ENST00000621676 ZNF696Q9H7X3 374 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms