RNA–Protein interactions for RNA: ENST00000621474.4

CBWD3-217, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-217ENST00000621474 TMCO5AQ8N6Q1 288 aa12.93□□□□□ -0.34
CBWD3-217ENST00000621474 ZBTB8AQ96BR9 441 aa12.93□□□□□ -0.34
CBWD3-217ENST00000621474 DTNBP1Q96EV8 351 aa12.93□□□□□ -0.34
CBWD3-217ENST00000621474 RNF145Q96MT1 663 aa12.93□□□□□ -0.34
CBWD3-217ENST00000621474 DMRTA2Q96SC8 542 aa12.93□□□□□ -0.34
CBWD3-217ENST00000621474 ECSITQ9BQ95 431 aa12.93□□□□□ -0.34
CBWD3-217ENST00000621474 PIGQQ9BRB3 760 aa12.93□□□□□ -0.34
CBWD3-217ENST00000621474 ABCD2Q9UBJ2 740 aa12.93□□□□□ -0.34
CBWD3-217ENST00000621474 C5orf58C9J3I9 102 aa12.92□□□□□ -0.34
CBWD3-217ENST00000621474 AP3D1O14617 1153 aa12.92□□□□□ -0.34
CBWD3-217ENST00000621474 TPST1O60507 370 aa12.92□□□□□ -0.34
CBWD3-217ENST00000621474 CYP7B1O75881 506 aa12.92□□□□□ -0.34
CBWD3-217ENST00000621474 MFN2O95140 757 aa12.92□□□□□ -0.34
CBWD3-217ENST00000621474 NUDT14O95848 222 aa12.92□□□□□ -0.34
CBWD3-217ENST00000621474 CPN1P15169 458 aa12.92□□□□□ -0.34
CBWD3-217ENST00000621474 ZNF17P17021 662 aa12.92□□□□□ -0.34
CBWD3-217ENST00000621474 CCR4P51679 360 aa12.92□□□□□ -0.34
CBWD3-217ENST00000621474 ZNF41P51814 821 aaPredicted RBP12.92□□□□□ -0.34
CBWD3-217ENST00000621474 SLC7A2P52569 658 aa12.92□□□□□ -0.34
CBWD3-217ENST00000621474 SUCLG1P53597 346 aaKnown RBP12.92□□□□□ -0.34
CBWD3-217ENST00000621474 DLX5P56178 289 aa12.92□□□□□ -0.34
CBWD3-217ENST00000621474 DMTNQ08495 405 aa12.92□□□□□ -0.34
CBWD3-217ENST00000621474 CBFBQ13951 182 aa12.92□□□□□ -0.34
CBWD3-217ENST00000621474 QPRTQ15274 297 aa12.92□□□□□ -0.34
CBWD3-217ENST00000621474 SLC25A53Q5H9E4 307 aa12.92□□□□□ -0.34
CBWD3-217ENST00000621474 ZNF311Q5JNZ3 666 aa12.92□□□□□ -0.34
CBWD3-217ENST00000621474 WLSQ5T9L3 541 aa12.92□□□□□ -0.34
CBWD3-217ENST00000621474 AAGABQ6PD74 315 aa12.92□□□□□ -0.34
CBWD3-217ENST00000621474 ULK2Q8IYT8 1036 aa12.92□□□□□ -0.34
CBWD3-217ENST00000621474 REXO5Q96IC2 774 aaKnown RBP12.92□□□□□ -0.34
CBWD3-217ENST00000621474 HOPXQ9BPY8 73 aaPredicted RBP12.92□□□□□ -0.34
CBWD3-217ENST00000621474 WFDC6Q9BQY6 131 aa12.92□□□□□ -0.34
CBWD3-217ENST00000621474 SPATA9Q9BWV2 254 aa12.92□□□□□ -0.34
CBWD3-217ENST00000621474 TAGLN3Q9UI15 199 aa12.92□□□□□ -0.34
CBWD3-217ENST00000621474 ANGPT4Q9Y264 503 aa12.92□□□□□ -0.34
CBWD3-217ENST00000621474 SLC5A6Q9Y289 635 aa12.92□□□□□ -0.34
CBWD3-217ENST00000621474 MEMO1Q9Y316 297 aa12.92□□□□□ -0.34
CBWD3-217ENST00000621474 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.91□□□□□ -0.34
CBWD3-217ENST00000621474 WIPF3A6NGB9 483 aa12.91□□□□□ -0.34
CBWD3-217ENST00000621474 E9PLN8 166 aa12.91□□□□□ -0.34
CBWD3-217ENST00000621474 H3BML4 177 aa12.91□□□□□ -0.34
CBWD3-217ENST00000621474 CCL21O00585 134 aa12.91□□□□□ -0.34
CBWD3-217ENST00000621474 LDLRP01130 860 aa12.91□□□□□ -0.34
CBWD3-217ENST00000621474 GKN3PP0CG01 181 aa12.91□□□□□ -0.34
CBWD3-217ENST00000621474 ACAA2P42765 397 aaKnown RBP12.91□□□□□ -0.34
CBWD3-217ENST00000621474 CLDN20P56880 219 aa12.91□□□□□ -0.34
CBWD3-217ENST00000621474 EPS8Q12929 822 aa12.91□□□□□ -0.34
CBWD3-217ENST00000621474 ART3Q13508 389 aa12.91□□□□□ -0.34
CBWD3-217ENST00000621474 KRT72Q14CN4 511 aa12.91□□□□□ -0.34
CBWD3-217ENST00000621474 ZNF585AQ6P3V2 769 aa12.91□□□□□ -0.34
CBWD3-217ENST00000621474 SEM1Q6ZVN7 128 aa12.91□□□□□ -0.34
CBWD3-217ENST00000621474 ARPINQ7Z6K5 226 aa12.91□□□□□ -0.34
CBWD3-217ENST00000621474 ADGRE4PQ86SQ3 457 aa12.91□□□□□ -0.34
CBWD3-217ENST00000621474 GGNQ86UU5 652 aa12.91□□□□□ -0.34
CBWD3-217ENST00000621474 CCDC120Q96HB5 630 aa12.91□□□□□ -0.34
CBWD3-217ENST00000621474 VKORC1Q9BQB6 163 aa12.91□□□□□ -0.34
CBWD3-217ENST00000621474 TP63Q9H3D4 680 aaPredicted RBP12.91□□□□□ -0.34
CBWD3-217ENST00000621474 IFT52Q9Y366 437 aa12.91□□□□□ -0.34
CBWD3-217ENST00000621474 BAHCC1Q9P281 2608 aa12.91□□□□□ -0.34
CBWD3-217ENST00000621474 INTS1Q8N201 2190 aaKnown RBP12.91□□□□□ -0.34
CBWD3-217ENST00000621474 A0A1B0GUH1 482 aa12.91□□□□□ -0.34
CBWD3-217ENST00000621474 FIGNL2A6NMB9 653 aa12.91□□□□□ -0.34
CBWD3-217ENST00000621474 FAM220BPB1ANY3 271 aa12.91□□□□□ -0.34
CBWD3-217ENST00000621474 TMEM229AB2RXF0 380 aa12.91□□□□□ -0.34
CBWD3-217ENST00000621474 FRS3O43559 492 aa12.91□□□□□ -0.34
CBWD3-217ENST00000621474 WDR1O75083 606 aa12.91□□□□□ -0.34
CBWD3-217ENST00000621474 OPN1SWP03999 348 aa12.91□□□□□ -0.34
CBWD3-217ENST00000621474 T-ENOLP0DO92 83 aa12.91□□□□□ -0.34
CBWD3-217ENST00000621474 PRG2P13727 222 aa12.91□□□□□ -0.34
CBWD3-217ENST00000621474 ACVR2AP27037 513 aa12.91□□□□□ -0.34
CBWD3-217ENST00000621474 ADH6P28332 368 aa12.91□□□□□ -0.34
CBWD3-217ENST00000621474 SHC1P29353 583 aa12.91□□□□□ -0.34
CBWD3-217ENST00000621474 PRKAR1BP31321 381 aa12.91□□□□□ -0.34
CBWD3-217ENST00000621474 RYKP34925 604 aa12.91□□□□□ -0.34
CBWD3-217ENST00000621474 SESN3P58005 492 aa12.91□□□□□ -0.34
CBWD3-217ENST00000621474 PSME3P61289 254 aa12.91□□□□□ -0.34
CBWD3-217ENST00000621474 ADORA2A-AS1P86434 159 aa12.91□□□□□ -0.34
CBWD3-217ENST00000621474 LARS2Q15031 903 aaKnown RBP12.91□□□□□ -0.34
CBWD3-217ENST00000621474 DUSP7Q16829 419 aa12.91□□□□□ -0.34
CBWD3-217ENST00000621474 CTU2Q2VPK5 515 aaKnown RBP12.91□□□□□ -0.34
CBWD3-217ENST00000621474 ENPP6Q6UWR7 440 aa12.91□□□□□ -0.34
CBWD3-217ENST00000621474 PLXDC2Q6UX71 529 aa12.91□□□□□ -0.34
CBWD3-217ENST00000621474 CCDC80Q76M96 950 aa12.91□□□□□ -0.34
CBWD3-217ENST00000621474 FAM26EQ8N5C1 309 aa12.91□□□□□ -0.34
CBWD3-217ENST00000621474 TAMM41Q96BW9 452 aa12.91□□□□□ -0.34
CBWD3-217ENST00000621474 CACNA1CQ13936 2221 aa12.9□□□□□ -0.34
CBWD3-217ENST00000621474 SPTAN1Q13813 2472 aaKnown RBP12.9□□□□□ -0.34
CBWD3-217ENST00000621474 ICE1Q9Y2F5 2266 aa12.9□□□□□ -0.34
CBWD3-217ENST00000621474 LINC01387J3KSC0 135 aa12.9□□□□□ -0.34
CBWD3-217ENST00000621474 M0QX08 132 aa12.9□□□□□ -0.34
CBWD3-217ENST00000621474 FAAHO00519 579 aa12.9□□□□□ -0.34
CBWD3-217ENST00000621474 EIF1P41567 113 aaKnown RBP12.9□□□□□ -0.34
CBWD3-217ENST00000621474 SLC25A3Q00325 362 aa12.9□□□□□ -0.34
CBWD3-217ENST00000621474 SRYQ05066 204 aa12.9□□□□□ -0.34
CBWD3-217ENST00000621474 LIPEQ05469 1076 aa12.9□□□□□ -0.34
CBWD3-217ENST00000621474 VEZF1Q14119 521 aa12.9□□□□□ -0.34
CBWD3-217ENST00000621474 BCL2A1Q16548 175 aa12.9□□□□□ -0.34
CBWD3-217ENST00000621474 ACSF3Q4G176 576 aaPredicted RBP12.9□□□□□ -0.34
CBWD3-217ENST00000621474 DHRS4L2Q6PKH6 230 aa12.9□□□□□ -0.34
CBWD3-217ENST00000621474 PM20D2Q8IYS1 436 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms