RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 SLC29A1Q99808 456 aa6.77□□□□□ -1.33
COLCA1-205ENST00000620864 SPO11Q9Y5K1 396 aa6.77□□□□□ -1.33
COLCA1-205ENST00000620864 SDK1Q7Z5N4 2213 aa6.77□□□□□ -1.33
COLCA1-205ENST00000620864 TCRBV21S2A2A0A5A6 115 aa6.76□□□□□ -1.33
COLCA1-205ENST00000620864 VSTM2BA6NLU5 285 aa6.76□□□□□ -1.33
COLCA1-205ENST00000620864 ENPP3O14638 875 aa6.76□□□□□ -1.33
COLCA1-205ENST00000620864 TK1P04183 234 aa6.76□□□□□ -1.33
COLCA1-205ENST00000620864 ACVR1BP36896 505 aa6.76□□□□□ -1.33
COLCA1-205ENST00000620864 P2RX1P51575 399 aa6.76□□□□□ -1.33
COLCA1-205ENST00000620864 APOFQ13790 326 aa6.76□□□□□ -1.33
COLCA1-205ENST00000620864 AGTRAPQ6RW13 159 aa6.76□□□□□ -1.33
COLCA1-205ENST00000620864 BTNL8Q6UX41 500 aa6.76□□□□□ -1.33
COLCA1-205ENST00000620864 ABHD12BQ7Z5M8 362 aaPredicted RBP6.76□□□□□ -1.33
COLCA1-205ENST00000620864 SYNPRQ8TBG9 265 aa6.76□□□□□ -1.33
COLCA1-205ENST00000620864 TIMM29Q9BSF4 260 aa6.76□□□□□ -1.33
COLCA1-205ENST00000620864 ZNF331Q9NQX6 463 aaPredicted RBP6.76□□□□□ -1.33
COLCA1-205ENST00000620864 NLE1Q9NVX2 485 aaPredicted RBP6.76□□□□□ -1.33
COLCA1-205ENST00000620864 SLC17A6Q9P2U8 582 aa6.76□□□□□ -1.33
COLCA1-205ENST00000620864 IL20RAQ9UHF4 553 aa6.76□□□□□ -1.33
COLCA1-205ENST00000620864 STRAPQ9Y3F4 350 aaKnown RBP6.76□□□□□ -1.33
COLCA1-205ENST00000620864 ADGRB1O14514 1584 aa6.76□□□□□ -1.33
COLCA1-205ENST00000620864 LOC730098B7Z3J9 87 aa6.76□□□□□ -1.33
COLCA1-205ENST00000620864 SOCS2O14508 198 aa6.76□□□□□ -1.33
COLCA1-205ENST00000620864 AGPAT2O15120 278 aa6.76□□□□□ -1.33
COLCA1-205ENST00000620864 SPATA31C1P0DKV0 1188 aa6.76□□□□□ -1.33
COLCA1-205ENST00000620864 TNFSF9P41273 254 aa6.76□□□□□ -1.33
COLCA1-205ENST00000620864 ODF4Q2M2E3 257 aa6.76□□□□□ -1.33
COLCA1-205ENST00000620864 ZNF791Q3KP31 576 aaPredicted RBP6.76□□□□□ -1.33
COLCA1-205ENST00000620864 LRFN4Q6PJG9 635 aa6.76□□□□□ -1.33
COLCA1-205ENST00000620864 SLC35F2Q8IXU6 374 aa6.76□□□□□ -1.33
COLCA1-205ENST00000620864 MTURNQ8N3F0 131 aa6.76□□□□□ -1.33
COLCA1-205ENST00000620864 PSMG2Q969U7 264 aa6.76□□□□□ -1.33
COLCA1-205ENST00000620864 CUTCQ9NTM9 273 aa6.76□□□□□ -1.33
COLCA1-205ENST00000620864 SLC39A9Q9NUM3 307 aa6.76□□□□□ -1.33
COLCA1-205ENST00000620864 MED17Q9NVC6 651 aa6.76□□□□□ -1.33
COLCA1-205ENST00000620864 HIF1ANQ9NWT6 349 aa6.76□□□□□ -1.33
COLCA1-205ENST00000620864 ENPP4Q9Y6X5 453 aa6.76□□□□□ -1.33
COLCA1-205ENST00000620864 V9GY05 133 aa6.76□□□□□ -1.33
COLCA1-205ENST00000620864 GPR39O43194 453 aa6.76□□□□□ -1.33
COLCA1-205ENST00000620864 MSI1O43347 362 aaKnown RBP6.76□□□□□ -1.33
COLCA1-205ENST00000620864 PTBP3O95758 552 aaKnown RBP6.76□□□□□ -1.33
COLCA1-205ENST00000620864 POLR2CP19387 275 aaPredicted RBP6.76□□□□□ -1.33
COLCA1-205ENST00000620864 GABRA2P47869 451 aa6.76□□□□□ -1.33
COLCA1-205ENST00000620864 LRRC25Q8N386 305 aaPredicted RBP6.76□□□□□ -1.33
COLCA1-205ENST00000620864 IL17RDQ8NFM7 739 aa6.76□□□□□ -1.33
COLCA1-205ENST00000620864 ANGPTL6Q8NI99 470 aa6.76□□□□□ -1.33
COLCA1-205ENST00000620864 SH3RF2Q8TEC5 729 aa6.76□□□□□ -1.33
COLCA1-205ENST00000620864 LINC01599Q8WXQ3 324 aa6.76□□□□□ -1.33
COLCA1-205ENST00000620864 DAZLQ92904 295 aaKnown RBP6.76□□□□□ -1.33
COLCA1-205ENST00000620864 ARSGQ96EG1 525 aa6.76□□□□□ -1.33
COLCA1-205ENST00000620864 IL25Q9H293 177 aa6.76□□□□□ -1.33
COLCA1-205ENST00000620864 SPHK1Q9NYA1 384 aa6.76□□□□□ -1.33
COLCA1-205ENST00000620864 FAM53CQ9NYF3 392 aa6.76□□□□□ -1.33
COLCA1-205ENST00000620864 PUS1Q9Y606 427 aaKnown RBP eCLIP6.76□□□□□ -1.33
COLCA1-205ENST00000620864 V9GYS6 101 aa6.76□□□□□ -1.33
COLCA1-205ENST00000620864 KDELR3O43731 214 aa6.76□□□□□ -1.33
COLCA1-205ENST00000620864 IQCF3P0C7M6 154 aa6.76□□□□□ -1.33
COLCA1-205ENST00000620864 ARL2P36404 184 aa6.76□□□□□ -1.33
COLCA1-205ENST00000620864 SIRPB2Q5JXA9 342 aa6.76□□□□□ -1.33
COLCA1-205ENST00000620864 WDR88Q6ZMY6 472 aa6.76□□□□□ -1.33
COLCA1-205ENST00000620864 SIGLECL1Q8N7X8 197 aa6.76□□□□□ -1.33
COLCA1-205ENST00000620864 ADIPOR1Q96A54 375 aa6.76□□□□□ -1.33
COLCA1-205ENST00000620864 EMID1Q96A84 441 aaPredicted RBP6.76□□□□□ -1.33
COLCA1-205ENST00000620864 CHRDQ9H2X0 955 aa6.76□□□□□ -1.33
COLCA1-205ENST00000620864 TMEM9BQ9NQ34 198 aa6.76□□□□□ -1.33
COLCA1-205ENST00000620864 GKN1Q9NS71 199 aa6.76□□□□□ -1.33
COLCA1-205ENST00000620864 LOC102725191A0A1B0GVB3 256 aa6.76□□□□□ -1.33
COLCA1-205ENST00000620864 TMEM82A0PJX8 343 aa6.76□□□□□ -1.33
COLCA1-205ENST00000620864 FAM221BA6H8Z2 402 aa6.76□□□□□ -1.33
COLCA1-205ENST00000620864 B4DXG7 233 aa6.76□□□□□ -1.33
COLCA1-205ENST00000620864 PMS2P2O95744 297 aa6.76□□□□□ -1.33
COLCA1-205ENST00000620864 FGF3P11487 239 aaPredicted RBP6.76□□□□□ -1.33
COLCA1-205ENST00000620864 PCGF2P35227 344 aa6.76□□□□□ -1.33
COLCA1-205ENST00000620864 RFX2P48378 723 aa6.76□□□□□ -1.33
COLCA1-205ENST00000620864 EFNA3P52797 238 aa6.76□□□□□ -1.33
COLCA1-205ENST00000620864 BIDP55957 195 aa6.76□□□□□ -1.33
COLCA1-205ENST00000620864 CHRNEQ04844 493 aa6.76□□□□□ -1.33
COLCA1-205ENST00000620864 COL9A2Q14055 689 aaPredicted RBP6.76□□□□□ -1.33
COLCA1-205ENST00000620864 TPGS2Q68CL5 300 aa6.76□□□□□ -1.33
COLCA1-205ENST00000620864 OR52E8Q6IFG1 317 aa6.76□□□□□ -1.33
COLCA1-205ENST00000620864 PARP16Q8N5Y8 322 aa6.76□□□□□ -1.33
COLCA1-205ENST00000620864 OR52P1PQ8NH57 321 aa6.76□□□□□ -1.33
COLCA1-205ENST00000620864 GATA6Q92908 595 aa6.76□□□□□ -1.33
COLCA1-205ENST00000620864 TEPSINQ96N21 525 aa6.76□□□□□ -1.33
COLCA1-205ENST00000620864 OR7D2Q96RA2 312 aa6.76□□□□□ -1.33
COLCA1-205ENST00000620864 MMP28Q9H239 520 aa6.76□□□□□ -1.33
COLCA1-205ENST00000620864 MTHFD2LQ9H903 347 aaPredicted RBP6.76□□□□□ -1.33
COLCA1-205ENST00000620864 GPR83Q9NYM4 423 aa6.76□□□□□ -1.33
COLCA1-205ENST00000620864 SLC2A6Q9UGQ3 507 aa6.76□□□□□ -1.33
COLCA1-205ENST00000620864 CYB5R1Q9UHQ9 305 aa6.76□□□□□ -1.33
COLCA1-205ENST00000620864 COPS3Q9UNS2 423 aa6.76□□□□□ -1.33
COLCA1-205ENST00000620864 EDDM13A0A1B0GTR0 161 aa6.76□□□□□ -1.33
COLCA1-205ENST00000620864 A0A1B0GV50 99 aa6.76□□□□□ -1.33
COLCA1-205ENST00000620864 METTL15A6NJ78 407 aa6.76□□□□□ -1.33
COLCA1-205ENST00000620864 DVL2O14641 736 aa6.76□□□□□ -1.33
COLCA1-205ENST00000620864 NDUFB2O95178 105 aa6.76□□□□□ -1.33
COLCA1-205ENST00000620864 GABRA5P31644 462 aa6.76□□□□□ -1.33
COLCA1-205ENST00000620864 TRHRP34981 398 aaPredicted RBP6.76□□□□□ -1.33
COLCA1-205ENST00000620864 ETV3P41162 512 aa6.76□□□□□ -1.33
COLCA1-205ENST00000620864 HTR3AP46098 478 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms