RNA–Protein interactions for RNA: ENST00000620854.4

NEDD9-216, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5 BASIC

Gene NEDD9, Length 4,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-216ENST00000620854 NUP50Q9UKX7 468 aa6.49□□□□□ -1.37
NEDD9-216ENST00000620854 WDR87Q6ZQQ6 2873 aa6.49□□□□□ -1.37
NEDD9-216ENST00000620854 TCRBV16S1A1N1A0A5B0 115 aa6.49□□□□□ -1.37
NEDD9-216ENST00000620854 ELOA3DA6NLF2 546 aaPredicted RBP6.49□□□□□ -1.37
NEDD9-216ENST00000620854 NPC1O15118 1278 aa6.49□□□□□ -1.37
NEDD9-216ENST00000620854 PIP5K1CO60331 668 aa6.49□□□□□ -1.37
NEDD9-216ENST00000620854 PLATP00750 562 aa6.49□□□□□ -1.37
NEDD9-216ENST00000620854 HMGN2P05204 90 aaKnown RBP6.49□□□□□ -1.37
NEDD9-216ENST00000620854 ANKRD34CP0C6C1 535 aa6.49□□□□□ -1.37
NEDD9-216ENST00000620854 SELENOPP49908 381 aa6.49□□□□□ -1.37
NEDD9-216ENST00000620854 E2F1Q01094 437 aa6.49□□□□□ -1.37
NEDD9-216ENST00000620854 MFSD13AQ14CX5 517 aa6.49□□□□□ -1.37
NEDD9-216ENST00000620854 TUSC1Q2TAM9 212 aa6.49□□□□□ -1.37
NEDD9-216ENST00000620854 ELOA3BQ3SY89 546 aa6.49□□□□□ -1.37
NEDD9-216ENST00000620854 NXPE4Q6UWF7 544 aa6.49□□□□□ -1.37
NEDD9-216ENST00000620854 ARSKQ6UWY0 536 aa6.49□□□□□ -1.37
NEDD9-216ENST00000620854 ZNF782Q6ZMW2 699 aaPredicted RBP6.49□□□□□ -1.37
NEDD9-216ENST00000620854 GJD3Q8N144 294 aa6.49□□□□□ -1.37
NEDD9-216ENST00000620854 MS4A15Q8N5U1 240 aa6.49□□□□□ -1.37
NEDD9-216ENST00000620854 LSM14AQ8ND56 463 aaKnown RBP6.49□□□□□ -1.37
NEDD9-216ENST00000620854 ELOA3Q8NG57 546 aa6.49□□□□□ -1.37
NEDD9-216ENST00000620854 OR4E2Q8NGC2 313 aa6.49□□□□□ -1.37
NEDD9-216ENST00000620854 PMM1Q92871 262 aa6.49□□□□□ -1.37
NEDD9-216ENST00000620854 LINC00052Q96N35 136 aa6.49□□□□□ -1.37
NEDD9-216ENST00000620854 CAMK1GQ96NX5 476 aa6.49□□□□□ -1.37
NEDD9-216ENST00000620854 ERMAPQ96PL5 475 aaPredicted RBP6.49□□□□□ -1.37
NEDD9-216ENST00000620854 MCHR1Q99705 422 aa6.49□□□□□ -1.37
NEDD9-216ENST00000620854 MAN2C1Q9NTJ4 1040 aa6.49□□□□□ -1.37
NEDD9-216ENST00000620854 SLCO1C1Q9NYB5 712 aa6.49□□□□□ -1.37
NEDD9-216ENST00000620854 CKLFQ9UBR5 152 aa6.49□□□□□ -1.37
NEDD9-216ENST00000620854 CCL26Q9Y258 94 aa6.49□□□□□ -1.37
NEDD9-216ENST00000620854 WDR45Q9Y484 360 aa6.49□□□□□ -1.37
NEDD9-216ENST00000620854 PIAS3Q9Y6X2 628 aa6.49□□□□□ -1.37
NEDD9-216ENST00000620854 IGLV3-16A0A075B6K0 115 aa6.49□□□□□ -1.37
NEDD9-216ENST00000620854 A0A1W2PPL8 197 aa6.49□□□□□ -1.37
NEDD9-216ENST00000620854 A0A1W2PRQ8 180 aa6.49□□□□□ -1.37
NEDD9-216ENST00000620854 TMEM129A0AVI4 362 aa6.49□□□□□ -1.37
NEDD9-216ENST00000620854 A8MVJ9 347 aa6.49□□□□□ -1.37
NEDD9-216ENST00000620854 GPR171O14626 319 aa6.49□□□□□ -1.37
NEDD9-216ENST00000620854 SLC16A5O15375 505 aa6.49□□□□□ -1.37
NEDD9-216ENST00000620854 LATO43561 262 aa6.49□□□□□ -1.37
NEDD9-216ENST00000620854 TMPRSS11DO60235 418 aa6.49□□□□□ -1.37
NEDD9-216ENST00000620854 KLF8O95600 359 aaPredicted RBP6.49□□□□□ -1.37
NEDD9-216ENST00000620854 PAK4O96013 591 aaPredicted RBP6.49□□□□□ -1.37
NEDD9-216ENST00000620854 ADH1BP00325 375 aa6.49□□□□□ -1.37
NEDD9-216ENST00000620854 CLUP10909 449 aa6.49□□□□□ -1.37
NEDD9-216ENST00000620854 EDNRAP25101 427 aa6.49□□□□□ -1.37
NEDD9-216ENST00000620854 PYCR1P32322 319 aa6.49□□□□□ -1.37
NEDD9-216ENST00000620854 GRK6P43250 576 aa6.49□□□□□ -1.37
NEDD9-216ENST00000620854 MAGEB1P43366 347 aa6.49□□□□□ -1.37
NEDD9-216ENST00000620854 FNTBP49356 437 aa6.49□□□□□ -1.37
NEDD9-216ENST00000620854 AP3S2P59780 193 aa6.49□□□□□ -1.37
NEDD9-216ENST00000620854 DSG2Q14126 1118 aa6.49□□□□□ -1.37
NEDD9-216ENST00000620854 PLA1AQ53H76 456 aa6.49□□□□□ -1.37
NEDD9-216ENST00000620854 C9orf50Q5SZB4 431 aa6.49□□□□□ -1.37
NEDD9-216ENST00000620854 SFRP5Q5T4F7 317 aa6.49□□□□□ -1.37
NEDD9-216ENST00000620854 GARNL3Q5VVW2 1013 aa6.49□□□□□ -1.37
NEDD9-216ENST00000620854 ASTLQ6HA08 431 aaPredicted RBP6.49□□□□□ -1.37
NEDD9-216ENST00000620854 SLC25A25Q6KCM7 469 aa6.49□□□□□ -1.37
NEDD9-216ENST00000620854 TMEM150AQ86TG1 271 aa6.49□□□□□ -1.37
NEDD9-216ENST00000620854 SLC9B2Q86UD5 537 aa6.49□□□□□ -1.37
NEDD9-216ENST00000620854 SLC51BQ86UW2 128 aa6.49□□□□□ -1.37
NEDD9-216ENST00000620854 OR4Q3Q8NH05 313 aa6.49□□□□□ -1.37
NEDD9-216ENST00000620854 APOBEC4Q8WW27 367 aaKnown RBP6.49□□□□□ -1.37
NEDD9-216ENST00000620854 GLYATL1Q969I3 302 aa6.49□□□□□ -1.37
NEDD9-216ENST00000620854 RAB7BQ96AH8 199 aa6.49□□□□□ -1.37
NEDD9-216ENST00000620854 KIAA1143Q96AT1 154 aaPredicted RBP6.49□□□□□ -1.37
NEDD9-216ENST00000620854 TM4SF18Q96CE8 201 aa6.49□□□□□ -1.37
NEDD9-216ENST00000620854 RBP7Q96R05 134 aa6.49□□□□□ -1.37
NEDD9-216ENST00000620854 MYNNQ9NPC7 610 aa6.49□□□□□ -1.37
NEDD9-216ENST00000620854 HINT3Q9NQE9 182 aaKnown RBP6.49□□□□□ -1.37
NEDD9-216ENST00000620854 ZNF69Q9UC07 566 aa6.49□□□□□ -1.37
NEDD9-216ENST00000620854 AK6Q9Y3D8 172 aaKnown RBP6.49□□□□□ -1.37
NEDD9-216ENST00000620854 KNTC1P50748 2209 aa6.48□□□□□ -1.37
NEDD9-216ENST00000620854 NRG2O14511 850 aaPredicted RBP6.48□□□□□ -1.37
NEDD9-216ENST00000620854 SEC14L5O43304 696 aa6.48□□□□□ -1.37
NEDD9-216ENST00000620854 NARSO43776 548 aaKnown RBP6.48□□□□□ -1.37
NEDD9-216ENST00000620854 UBXN7O94888 489 aa6.48□□□□□ -1.37
NEDD9-216ENST00000620854 ZNF432O94892 652 aa6.48□□□□□ -1.37
NEDD9-216ENST00000620854 CHRM4P08173 479 aa6.48□□□□□ -1.37
NEDD9-216ENST00000620854 H2AFB2P0C5Z0 115 aa6.48□□□□□ -1.37
NEDD9-216ENST00000620854 ACADLP28330 430 aa6.48□□□□□ -1.37
NEDD9-216ENST00000620854 GBX2P52951 348 aaPredicted RBP6.48□□□□□ -1.37
NEDD9-216ENST00000620854 ARFIP1P53367 373 aa6.48□□□□□ -1.37
NEDD9-216ENST00000620854 CLDN12P56749 244 aa6.48□□□□□ -1.37
NEDD9-216ENST00000620854 CDK5Q00535 292 aa6.48□□□□□ -1.37
NEDD9-216ENST00000620854 ST3GAL3Q11203 375 aa6.48□□□□□ -1.37
NEDD9-216ENST00000620854 CAMK1Q14012 370 aa6.48□□□□□ -1.37
NEDD9-216ENST00000620854 NNATQ16517 81 aa6.48□□□□□ -1.37
NEDD9-216ENST00000620854 TMEM107Q6UX40 140 aa6.48□□□□□ -1.37
NEDD9-216ENST00000620854 ZNF627Q7L945 461 aa6.48□□□□□ -1.37
NEDD9-216ENST00000620854 LIX1LQ8IVB5 337 aa6.48□□□□□ -1.37
NEDD9-216ENST00000620854 FOXRED2Q8IWF2 684 aa6.48□□□□□ -1.37
NEDD9-216ENST00000620854 ARMC10Q8N2F6 343 aa6.48□□□□□ -1.37
NEDD9-216ENST00000620854 TMEM99Q8N816 258 aa6.48□□□□□ -1.37
NEDD9-216ENST00000620854 OR9A1PQ8NGU1 263 aa6.48□□□□□ -1.37
NEDD9-216ENST00000620854 MRPL38Q96DV4 380 aaKnown RBP6.48□□□□□ -1.37
NEDD9-216ENST00000620854 NEURL3Q96EH8 262 aa6.48□□□□□ -1.37
NEDD9-216ENST00000620854 B3GNT4Q9C0J1 378 aa6.48□□□□□ -1.37
NEDD9-216ENST00000620854 AUNIPQ9H7T9 357 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms