RNA–Protein interactions for RNA: ENST00000620786.4

CLIP1-219, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CLIP1, Length 5,913 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-219ENST00000620786 RP2O75695 350 aa10.65□□□□□ -0.71
CLIP1-219ENST00000620786 AMY2AP04746 511 aa10.65□□□□□ -0.71
CLIP1-219ENST00000620786 HTR5AP47898 357 aa10.65□□□□□ -0.71
CLIP1-219ENST00000620786 ZNF45Q02386 682 aa10.65□□□□□ -0.71
CLIP1-219ENST00000620786 GPR50Q13585 617 aa10.65□□□□□ -0.71
CLIP1-219ENST00000620786 VASNQ6EMK4 673 aa10.65□□□□□ -0.71
CLIP1-219ENST00000620786 ZNF585AQ6P3V2 769 aa10.65□□□□□ -0.71
CLIP1-219ENST00000620786 PIAS4Q8N2W9 510 aaPredicted RBP10.65□□□□□ -0.71
CLIP1-219ENST00000620786 LSM14AQ8ND56 463 aaKnown RBP10.65□□□□□ -0.71
CLIP1-219ENST00000620786 ISOC1Q96CN7 298 aa10.65□□□□□ -0.71
CLIP1-219ENST00000620786 DECR2Q9NUI1 292 aa10.65□□□□□ -0.71
CLIP1-219ENST00000620786 MMP17Q9ULZ9 603 aa10.65□□□□□ -0.71
CLIP1-219ENST00000620786 MEGF11A6BM72 1044 aa10.64□□□□□ -0.71
CLIP1-219ENST00000620786 C12orf71A8MTZ7 269 aa10.64□□□□□ -0.71
CLIP1-219ENST00000620786 ZNF264O43296 627 aa10.64□□□□□ -0.71
CLIP1-219ENST00000620786 FBXO45P0C2W1 286 aa10.64□□□□□ -0.71
CLIP1-219ENST00000620786 RHEBQ15382 184 aa10.64□□□□□ -0.71
CLIP1-219ENST00000620786 DUSP19Q8WTR2 217 aa10.64□□□□□ -0.71
CLIP1-219ENST00000620786 ZNF845Q96IR2 970 aaPredicted RBP10.64□□□□□ -0.71
CLIP1-219ENST00000620786 THOC3Q96J01 351 aaKnown RBP10.64□□□□□ -0.71
CLIP1-219ENST00000620786 PIGQQ9BRB3 760 aa10.64□□□□□ -0.71
CLIP1-219ENST00000620786 CDCP1Q9H5V8 836 aa10.64□□□□□ -0.71
CLIP1-219ENST00000620786 ERVK13-1Q9NX77 482 aa10.64□□□□□ -0.71
CLIP1-219ENST00000620786 ANKRD10Q9NXR5 420 aa10.64□□□□□ -0.71
CLIP1-219ENST00000620786 OR14J1Q9UGF5 321 aa10.64□□□□□ -0.71
CLIP1-219ENST00000620786 RHBDD3Q9Y3P4 386 aa10.64□□□□□ -0.71
CLIP1-219ENST00000620786 PCDHGA7Q9Y5G6 932 aa10.64□□□□□ -0.71
CLIP1-219ENST00000620786 TRAV18A0A075B6X5 111 aa10.64□□□□□ -0.71
CLIP1-219ENST00000620786 KDM4EB2RXH2 506 aaPredicted RBP10.64□□□□□ -0.71
CLIP1-219ENST00000620786 MTHFD2P13995 350 aa10.64□□□□□ -0.71
CLIP1-219ENST00000620786 ARL6IP1Q15041 203 aa10.64□□□□□ -0.71
CLIP1-219ENST00000620786 PAPD4Q6PIY7 484 aaKnown RBP10.64□□□□□ -0.71
CLIP1-219ENST00000620786 AAED1Q7RTV5 226 aa10.64□□□□□ -0.71
CLIP1-219ENST00000620786 PXKQ7Z7A4 578 aa10.64□□□□□ -0.71
CLIP1-219ENST00000620786 UBALD2Q8IYN6 164 aa10.64□□□□□ -0.71
CLIP1-219ENST00000620786 CMTM1Q8IZ96 169 aa10.64□□□□□ -0.71
CLIP1-219ENST00000620786 LILRB2Q8N423 598 aa10.64□□□□□ -0.71
CLIP1-219ENST00000620786 GOLM1Q8NBJ4 401 aa10.64□□□□□ -0.71
CLIP1-219ENST00000620786 MICU1Q9BPX6 476 aa10.64□□□□□ -0.71
CLIP1-219ENST00000620786 VN1R3Q9BXE9 311 aa10.64□□□□□ -0.71
CLIP1-219ENST00000620786 FAM117AQ9C073 453 aa10.64□□□□□ -0.71
CLIP1-219ENST00000620786 SYNPO2LQ9H987 977 aa10.64□□□□□ -0.71
CLIP1-219ENST00000620786 FOLH1BQ9HBA9 442 aa10.64□□□□□ -0.71
CLIP1-219ENST00000620786 ACOT13Q9NPJ3 140 aa10.64□□□□□ -0.71
CLIP1-219ENST00000620786 MLXQ9UH92 298 aa10.64□□□□□ -0.71
CLIP1-219ENST00000620786 ADAM29Q9UKF5 820 aa10.64□□□□□ -0.71
CLIP1-219ENST00000620786 TPOP07202 933 aa10.64□□□□□ -0.71
CLIP1-219ENST00000620786 PSMB10P40306 273 aa10.64□□□□□ -0.71
CLIP1-219ENST00000620786 TMBIM6P55061 237 aa10.64□□□□□ -0.71
CLIP1-219ENST00000620786 GABARAPL2P60520 117 aa10.64□□□□□ -0.71
CLIP1-219ENST00000620786 PHC1P78364 1004 aa10.64□□□□□ -0.71
CLIP1-219ENST00000620786 ASRGL1Q7L266 308 aa10.64□□□□□ -0.71
CLIP1-219ENST00000620786 ZNF695Q8IW36 515 aa10.64□□□□□ -0.71
CLIP1-219ENST00000620786 LKAAEAR1Q8TD35 194 aa10.64□□□□□ -0.71
CLIP1-219ENST00000620786 GPR148Q8TDV2 347 aa10.64□□□□□ -0.71
CLIP1-219ENST00000620786 TOMM40LQ969M1 308 aa10.64□□□□□ -0.71
CLIP1-219ENST00000620786 SDR39U1Q9NRG7 319 aaPredicted RBP10.64□□□□□ -0.71
CLIP1-219ENST00000620786 C14orf119Q9NWQ9 140 aa10.64□□□□□ -0.71
CLIP1-219ENST00000620786 MYH3P11055 1940 aa10.64□□□□□ -0.71
CLIP1-219ENST00000620786 A0A087WUU8 490 aa10.64□□□□□ -0.71
CLIP1-219ENST00000620786 TSPAN4O14817 238 aa10.64□□□□□ -0.71
CLIP1-219ENST00000620786 SHOXO15266 292 aa10.64□□□□□ -0.71
CLIP1-219ENST00000620786 CDK2P24941 298 aa10.64□□□□□ -0.71
CLIP1-219ENST00000620786 ADPRHP54922 357 aa10.64□□□□□ -0.71
CLIP1-219ENST00000620786 VEZF1Q14119 521 aa10.64□□□□□ -0.71
CLIP1-219ENST00000620786 MOGQ16653 247 aa10.64□□□□□ -0.71
CLIP1-219ENST00000620786 GSG1LQ6UXU4 331 aa10.64□□□□□ -0.71
CLIP1-219ENST00000620786 SERPINA11Q86U17 422 aa10.64□□□□□ -0.71
CLIP1-219ENST00000620786 MISPQ8IVT2 679 aa10.64□□□□□ -0.71
CLIP1-219ENST00000620786 C1QTNF2Q9BXJ5 285 aa10.64□□□□□ -0.71
CLIP1-219ENST00000620786 PLEKHM1Q9Y4G2 1056 aa10.64□□□□□ -0.71
CLIP1-219ENST00000620786 B8ZZF3 427 aa10.63□□□□□ -0.71
CLIP1-219ENST00000620786 TRAPPC2LH3BP13 241 aa10.63□□□□□ -0.71
CLIP1-219ENST00000620786 SSX5O60225 188 aa10.63□□□□□ -0.71
CLIP1-219ENST00000620786 CBX7O95931 251 aa10.63□□□□□ -0.71
CLIP1-219ENST00000620786 RETP07949 1114 aa10.63□□□□□ -0.71
CLIP1-219ENST00000620786 ZNF44P15621 663 aa10.63□□□□□ -0.71
CLIP1-219ENST00000620786 IVDP26440 423 aa10.63□□□□□ -0.71
CLIP1-219ENST00000620786 CARD18P57730 90 aa10.63□□□□□ -0.71
CLIP1-219ENST00000620786 KIAA1024LP59773 190 aa10.63□□□□□ -0.71
CLIP1-219ENST00000620786 IL17RDQ8NFM7 739 aa10.63□□□□□ -0.71
CLIP1-219ENST00000620786 PDXPQ96GD0 296 aa10.63□□□□□ -0.71
CLIP1-219ENST00000620786 C7orf34Q96L11 122 aa10.63□□□□□ -0.71
CLIP1-219ENST00000620786 TEX10Q9NXF1 929 aaPredicted RBP10.63□□□□□ -0.71
CLIP1-219ENST00000620786 ALS2Q96Q42 1657 aa10.63□□□□□ -0.71
CLIP1-219ENST00000620786 IFNA1P01562 189 aa10.63□□□□□ -0.71
CLIP1-219ENST00000620786 ENPP1P22413 925 aa10.63□□□□□ -0.71
CLIP1-219ENST00000620786 EIF2DP41214 584 aaKnown RBP10.63□□□□□ -0.71
CLIP1-219ENST00000620786 ACTBP60709 375 aa10.63□□□□□ -0.71
CLIP1-219ENST00000620786 ACTG1P63261 375 aa10.63□□□□□ -0.71
CLIP1-219ENST00000620786 REEP5Q00765 189 aa10.63□□□□□ -0.71
CLIP1-219ENST00000620786 CCDC58Q4VC31 144 aa10.63□□□□□ -0.71
CLIP1-219ENST00000620786 FAM57BQ71RH2 274 aa10.63□□□□□ -0.71
CLIP1-219ENST00000620786 TMEM150AQ86TG1 271 aa10.63□□□□□ -0.71
CLIP1-219ENST00000620786 METTL4Q8N3J2 472 aa10.63□□□□□ -0.71
CLIP1-219ENST00000620786 OR5D14Q8NGL3 314 aa10.63□□□□□ -0.71
CLIP1-219ENST00000620786 ZNF300Q96RE9 604 aaPredicted RBP10.63□□□□□ -0.71
CLIP1-219ENST00000620786 ARRDC1-AS1Q9H2J1 176 aa10.63□□□□□ -0.71
CLIP1-219ENST00000620786 TMEM45AQ9NWC5 275 aa10.63□□□□□ -0.71
CLIP1-219ENST00000620786 KNG1P01042 644 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms