RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 G3V3Y1 287 aa4.8□□□□□ -1.64
SHMT1-211ENST00000618902 PYCARD-AS1I3L0S3 204 aa4.8□□□□□ -1.64
SHMT1-211ENST00000618902 LINC01387J3KSC0 135 aa4.8□□□□□ -1.64
SHMT1-211ENST00000618902 HAX1O00165 279 aa4.8□□□□□ -1.64
SHMT1-211ENST00000618902 RNASET2O00584 256 aaKnown RBP4.8□□□□□ -1.64
SHMT1-211ENST00000618902 PRRG2O14669 202 aa4.8□□□□□ -1.64
SHMT1-211ENST00000618902 EI24O14681 340 aa4.8□□□□□ -1.64
SHMT1-211ENST00000618902 BCKDKO14874 412 aa4.8□□□□□ -1.64
SHMT1-211ENST00000618902 TO15178 435 aa4.8□□□□□ -1.64
SHMT1-211ENST00000618902 EMC8O43402 210 aa4.8□□□□□ -1.64
SHMT1-211ENST00000618902 TSPAN2O60636 221 aa4.8□□□□□ -1.64
SHMT1-211ENST00000618902 CLPXO76031 633 aa4.8□□□□□ -1.64
SHMT1-211ENST00000618902 PRKD3O94806 890 aa4.8□□□□□ -1.64
SHMT1-211ENST00000618902 NKX2-2O95096 273 aa4.8□□□□□ -1.64
SHMT1-211ENST00000618902 CPSF4O95639 269 aaKnown RBP4.8□□□□□ -1.64
SHMT1-211ENST00000618902 IFNA14P01570 189 aa4.8□□□□□ -1.64
SHMT1-211ENST00000618902 P04436 131 aa4.8□□□□□ -1.64
SHMT1-211ENST00000618902 GSNP06396 782 aa4.8□□□□□ -1.64
SHMT1-211ENST00000618902 GABRA1P14867 456 aa4.8□□□□□ -1.64
SHMT1-211ENST00000618902 ZNF24P17028 368 aa4.8□□□□□ -1.64
SHMT1-211ENST00000618902 ITGA2P17301 1181 aa4.8□□□□□ -1.64
SHMT1-211ENST00000618902 ENDOUP21128 410 aaKnown RBP4.8□□□□□ -1.64
SHMT1-211ENST00000618902 CNR1P21554 472 aa4.8□□□□□ -1.64
SHMT1-211ENST00000618902 DRD5P21918 477 aa4.8□□□□□ -1.64
SHMT1-211ENST00000618902 EEF1B2P24534 225 aaKnown RBP4.8□□□□□ -1.64
SHMT1-211ENST00000618902 ELAVL4P26378 380 aaKnown RBP4.8□□□□□ -1.64
SHMT1-211ENST00000618902 ABCD3P28288 659 aa4.8□□□□□ -1.64
SHMT1-211ENST00000618902 DNAJA1P31689 397 aaKnown RBP4.8□□□□□ -1.64
SHMT1-211ENST00000618902 PTGDSP41222 190 aa4.8□□□□□ -1.64
SHMT1-211ENST00000618902 MAGEA2P43356 314 aa4.8□□□□□ -1.64
SHMT1-211ENST00000618902 MAGEA8P43361 318 aa4.8□□□□□ -1.64
SHMT1-211ENST00000618902 PPICP45877 212 aa4.8□□□□□ -1.64
SHMT1-211ENST00000618902 TDGF1P3P51864 188 aa4.8□□□□□ -1.64
SHMT1-211ENST00000618902 SMSP52788 366 aa4.8□□□□□ -1.64
SHMT1-211ENST00000618902 MVDP53602 400 aa4.8□□□□□ -1.64
SHMT1-211ENST00000618902 PSMD4P55036 377 aaKnown RBP4.8□□□□□ -1.64
SHMT1-211ENST00000618902 CASP9P55211 416 aa4.8□□□□□ -1.64
SHMT1-211ENST00000618902 TPD52P55327 224 aaPredicted RBP4.8□□□□□ -1.64
SHMT1-211ENST00000618902 FBXW4P57775 412 aa4.8□□□□□ -1.64
SHMT1-211ENST00000618902 RPS26P62854 115 aaKnown RBP4.8□□□□□ -1.64
SHMT1-211ENST00000618902 PPP2R2BQ00005 443 aa4.8□□□□□ -1.64
SHMT1-211ENST00000618902 ALDH6A1Q02252 535 aaKnown RBP4.8□□□□□ -1.64
SHMT1-211ENST00000618902 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.8□□□□□ -1.64
SHMT1-211ENST00000618902 FUT5Q11128 374 aa4.8□□□□□ -1.64
SHMT1-211ENST00000618902 ZNF155Q12901 538 aaPredicted RBP4.8□□□□□ -1.64
SHMT1-211ENST00000618902 RAB39AQ14964 217 aa4.8□□□□□ -1.64
SHMT1-211ENST00000618902 MAPK11Q15759 364 aa4.8□□□□□ -1.64
SHMT1-211ENST00000618902 NTRK2Q16620 822 aa4.8□□□□□ -1.64
SHMT1-211ENST00000618902 DUSP5Q16690 384 aa4.8□□□□□ -1.64
SHMT1-211ENST00000618902 DGUOKQ16854 277 aa4.8□□□□□ -1.64
SHMT1-211ENST00000618902 TIGD2Q4W5G0 525 aa4.8□□□□□ -1.64
SHMT1-211ENST00000618902 COX20Q5RI15 118 aa4.8□□□□□ -1.64
SHMT1-211ENST00000618902 ANXA8L1Q5VT79 327 aa4.8□□□□□ -1.64
SHMT1-211ENST00000618902 HLA-DQA1Q5Y7H0 255 aa4.8□□□□□ -1.64
SHMT1-211ENST00000618902 SLC22A10Q63ZE4 541 aa4.8□□□□□ -1.64
SHMT1-211ENST00000618902 MFSD12Q6NUT3 480 aa4.8□□□□□ -1.64
SHMT1-211ENST00000618902 ZCCHC12Q6PEW1 402 aa4.8□□□□□ -1.64
SHMT1-211ENST00000618902 SLC2A7Q6PXP3 512 aa4.8□□□□□ -1.64
SHMT1-211ENST00000618902 IL20RBQ6UXL0 311 aa4.8□□□□□ -1.64
SHMT1-211ENST00000618902 DNAJC14Q6Y2X3 702 aaPredicted RBP4.8□□□□□ -1.64
SHMT1-211ENST00000618902 KCTD8Q6ZWB6 473 aa4.8□□□□□ -1.64
SHMT1-211ENST00000618902 GALNT10Q86SR1 603 aa4.8□□□□□ -1.64
SHMT1-211ENST00000618902 STK32CQ86UX6 486 aa4.8□□□□□ -1.64
SHMT1-211ENST00000618902 IFNEQ86WN2 208 aa4.8□□□□□ -1.64
SHMT1-211ENST00000618902 CALHM3Q86XJ0 350 aa4.8□□□□□ -1.64
SHMT1-211ENST00000618902 SLC44A2Q8IWA5 706 aaPredicted RBP4.8□□□□□ -1.64
SHMT1-211ENST00000618902 SLC30A8Q8IWU4 369 aa4.8□□□□□ -1.64
SHMT1-211ENST00000618902 MICU2Q8IYU8 434 aa4.8□□□□□ -1.64
SHMT1-211ENST00000618902 SLC16A11Q8NCK7 471 aa4.8□□□□□ -1.64
SHMT1-211ENST00000618902 PSD4Q8NDX1 1056 aa4.8□□□□□ -1.64
SHMT1-211ENST00000618902 NUP43Q8NFH3 380 aa4.8□□□□□ -1.64
SHMT1-211ENST00000618902 OR4A15Q8NGL6 344 aa4.8□□□□□ -1.64
SHMT1-211ENST00000618902 OR5AK3PQ8NH89 298 aa4.8□□□□□ -1.64
SHMT1-211ENST00000618902 GOT1L1Q8NHS2 421 aaPredicted RBP4.8□□□□□ -1.64
SHMT1-211ENST00000618902 SFXN5Q8TD22 340 aa4.8□□□□□ -1.64
SHMT1-211ENST00000618902 PAQR8Q8TEZ7 354 aa4.8□□□□□ -1.64
SHMT1-211ENST00000618902 FBLIM1Q8WUP2 373 aa4.8□□□□□ -1.64
SHMT1-211ENST00000618902 RNF138Q8WVD3 245 aa4.8□□□□□ -1.64
SHMT1-211ENST00000618902 OIT3Q8WWZ8 545 aa4.8□□□□□ -1.64
SHMT1-211ENST00000618902 PIK3R3Q92569 461 aa4.8□□□□□ -1.64
SHMT1-211ENST00000618902 GTF2H4Q92759 462 aa4.8□□□□□ -1.64
SHMT1-211ENST00000618902 HGDQ93099 445 aa4.8□□□□□ -1.64
SHMT1-211ENST00000618902 TMBIM1Q969X1 311 aa4.8□□□□□ -1.64
SHMT1-211ENST00000618902 SPACA9Q96E40 222 aaPredicted RBP4.8□□□□□ -1.64
SHMT1-211ENST00000618902 SLC35A4Q96G79 324 aa4.8□□□□□ -1.64
SHMT1-211ENST00000618902 LCORQ96JN0 433 aaPredicted RBP4.8□□□□□ -1.64
SHMT1-211ENST00000618902 GPR137Q96N19 417 aa4.8□□□□□ -1.64
SHMT1-211ENST00000618902 FRMD6Q96NE9 622 aa4.8□□□□□ -1.64
SHMT1-211ENST00000618902 OR52E6Q96RD3 313 aa4.8□□□□□ -1.64
SHMT1-211ENST00000618902 NODALQ96S42 347 aa4.8□□□□□ -1.64
SHMT1-211ENST00000618902 KLHDC3Q9BQ90 382 aa4.8□□□□□ -1.64
SHMT1-211ENST00000618902 VKORC1Q9BQB6 163 aa4.8□□□□□ -1.64
SHMT1-211ENST00000618902 YIPF4Q9BSR8 244 aa4.8□□□□□ -1.64
SHMT1-211ENST00000618902 LMF2Q9BU23 707 aaKnown RBP4.8□□□□□ -1.64
SHMT1-211ENST00000618902 RTN4RQ9BZR6 473 aa4.8□□□□□ -1.64
SHMT1-211ENST00000618902 PAIP1Q9H074 479 aaKnown RBP4.8□□□□□ -1.64
SHMT1-211ENST00000618902 RACGAP1Q9H0H5 632 aa4.8□□□□□ -1.64
SHMT1-211ENST00000618902 GABARAPL1Q9H0R8 117 aa4.8□□□□□ -1.64
SHMT1-211ENST00000618902 RAD21L1Q9H4I0 556 aa4.8□□□□□ -1.64
SHMT1-211ENST00000618902 IKZF5Q9H5V7 419 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 99.2 ms