RNA–Protein interactions for RNA: ENST00000618606.1

TARDBP-220, Transcript of TAR DNA binding protein, humanhuman

TSL 2

Gene TARDBP, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-220ENST00000618606 C16orf62Q7Z3J2 963 aa1.78□□□□□ -2.12
TARDBP-220ENST00000618606 TSEN54Q7Z6J9 526 aaKnown RBP1.78□□□□□ -2.12
TARDBP-220ENST00000618606 ACOT1Q86TX2 421 aa1.78□□□□□ -2.12
TARDBP-220ENST00000618606 VPS36Q86VN1 386 aa1.78□□□□□ -2.12
TARDBP-220ENST00000618606 CLEC4FQ8N1N0 589 aa1.78□□□□□ -2.12
TARDBP-220ENST00000618606 STXBP6Q8NFX7 210 aa1.78□□□□□ -2.12
TARDBP-220ENST00000618606 OR5L2Q8NGL0 311 aa1.78□□□□□ -2.12
TARDBP-220ENST00000618606 TRMT10AQ8TBZ6 339 aaKnown RBP1.78□□□□□ -2.12
TARDBP-220ENST00000618606 TBCKQ8TEA7 893 aa1.78□□□□□ -2.12
TARDBP-220ENST00000618606 TADA1Q96BN2 335 aa1.78□□□□□ -2.12
TARDBP-220ENST00000618606 DNAJA3Q96EY1 480 aa1.78□□□□□ -2.12
TARDBP-220ENST00000618606 C11orf24Q96F05 449 aaPredicted RBP1.78□□□□□ -2.12
TARDBP-220ENST00000618606 SH3YL1Q96HL8 342 aaPredicted RBP1.78□□□□□ -2.12
TARDBP-220ENST00000618606 MAGEB18Q96M61 343 aa1.78□□□□□ -2.12
TARDBP-220ENST00000618606 CCT8L2Q96SF2 557 aa1.78□□□□□ -2.12
TARDBP-220ENST00000618606 NPY6RQ99463 290 aa1.78□□□□□ -2.12
TARDBP-220ENST00000618606 OMDQ99983 421 aa1.78□□□□□ -2.12
TARDBP-220ENST00000618606 CCDC77Q9BR77 488 aa1.78□□□□□ -2.12
TARDBP-220ENST00000618606 ROPN1BQ9BZX4 212 aaPredicted RBP1.78□□□□□ -2.12
TARDBP-220ENST00000618606 POLR3FQ9H1D9 316 aaPredicted RBP1.78□□□□□ -2.12
TARDBP-220ENST00000618606 RNF41Q9H4P4 317 aaPredicted RBP1.78□□□□□ -2.12
TARDBP-220ENST00000618606 FN3KRPQ9HA64 309 aa1.78□□□□□ -2.12
TARDBP-220ENST00000618606 ESM1Q9NQ30 184 aa1.78□□□□□ -2.12
TARDBP-220ENST00000618606 MEPEQ9NQ76 525 aaPredicted RBP1.78□□□□□ -2.12
TARDBP-220ENST00000618606 UFSP2Q9NUQ7 469 aa1.78□□□□□ -2.12
TARDBP-220ENST00000618606 ABCG2Q9UNQ0 655 aa1.78□□□□□ -2.12
TARDBP-220ENST00000618606 RNF6Q9Y252 685 aa1.78□□□□□ -2.12
TARDBP-220ENST00000618606 EXOSC1Q9Y3B2 195 aaKnown RBP1.78□□□□□ -2.12
TARDBP-220ENST00000618606 DDX49Q9Y6V7 483 aaKnown RBP1.78□□□□□ -2.12
TARDBP-220ENST00000618606 TRAV26-1A0A087WT03 109 aa1.77□□□□□ -2.13
TARDBP-220ENST00000618606 A0A1B0GVL5 298 aa1.77□□□□□ -2.13
TARDBP-220ENST00000618606 LRP5LA4QPB2 252 aa1.77□□□□□ -2.13
TARDBP-220ENST00000618606 GOLGA8OA6NCC3 632 aa1.77□□□□□ -2.13
TARDBP-220ENST00000618606 BTBD17A6NE02 478 aa1.77□□□□□ -2.13
TARDBP-220ENST00000618606 OR2AG2A6NM03 316 aa1.77□□□□□ -2.13
TARDBP-220ENST00000618606 OR52A4PA6NMU1 304 aa1.77□□□□□ -2.13
TARDBP-220ENST00000618606 GOLGA8NF8WBI6 632 aa1.77□□□□□ -2.13
TARDBP-220ENST00000618606 G3V4G9 280 aa1.77□□□□□ -2.13
TARDBP-220ENST00000618606 TM9SF1O15321 606 aa1.77□□□□□ -2.13
TARDBP-220ENST00000618606 LRRTM2O43300 516 aa1.77□□□□□ -2.13
TARDBP-220ENST00000618606 FCMRO60667 390 aa1.77□□□□□ -2.13
TARDBP-220ENST00000618606 ECI2O75521 394 aa1.77□□□□□ -2.13
TARDBP-220ENST00000618606 JCHAINP01591 159 aa1.77□□□□□ -2.13
TARDBP-220ENST00000618606 CAPN1P07384 714 aa1.77□□□□□ -2.13
TARDBP-220ENST00000618606 PNMTP11086 282 aa1.77□□□□□ -2.13
TARDBP-220ENST00000618606 NCF2P19878 526 aaPredicted RBP1.77□□□□□ -2.13
TARDBP-220ENST00000618606 CALML3P27482 149 aa1.77□□□□□ -2.13
TARDBP-220ENST00000618606 RDXP35241 583 aaKnown RBP1.77□□□□□ -2.13
TARDBP-220ENST00000618606 MAGEA8P43361 318 aa1.77□□□□□ -2.13
TARDBP-220ENST00000618606 FNTAP49354 379 aa1.77□□□□□ -2.13
TARDBP-220ENST00000618606 CASP4P49662 377 aa1.77□□□□□ -2.13
TARDBP-220ENST00000618606 STK19P49842 368 aaPredicted RBP1.77□□□□□ -2.13
TARDBP-220ENST00000618606 SLC25A1P53007 311 aa1.77□□□□□ -2.13
TARDBP-220ENST00000618606 LIM2P55344 173 aa1.77□□□□□ -2.13
TARDBP-220ENST00000618606 OSTNP61366 133 aa1.77□□□□□ -2.13
TARDBP-220ENST00000618606 RPS6P62753 249 aaKnown RBP1.77□□□□□ -2.13
TARDBP-220ENST00000618606 PAX2Q02962 417 aa1.77□□□□□ -2.13
TARDBP-220ENST00000618606 MECOMQ03112 1051 aa1.77□□□□□ -2.13
TARDBP-220ENST00000618606 RGS1Q08116 209 aa1.77□□□□□ -2.13
TARDBP-220ENST00000618606 BST1Q10588 318 aa1.77□□□□□ -2.13
TARDBP-220ENST00000618606 BNIP1Q12981 228 aa1.77□□□□□ -2.13
TARDBP-220ENST00000618606 PLD1Q13393 1074 aa1.77□□□□□ -2.13
TARDBP-220ENST00000618606 EIF2B1Q14232 305 aaKnown RBP1.77□□□□□ -2.13
TARDBP-220ENST00000618606 MXD4Q14582 209 aaPredicted RBP1.77□□□□□ -2.13
TARDBP-220ENST00000618606 ATXN7L3Q14CW9 347 aaPredicted RBP1.77□□□□□ -2.13
TARDBP-220ENST00000618606 TATDN3Q17R31 274 aa1.77□□□□□ -2.13
TARDBP-220ENST00000618606 EXOC3L2Q2M3D2 409 aa1.77□□□□□ -2.13
TARDBP-220ENST00000618606 FILIP1LQ4L180 1135 aa1.77□□□□□ -2.13
TARDBP-220ENST00000618606 PDZK1Q5T2W1 519 aa1.77□□□□□ -2.13
TARDBP-220ENST00000618606 APOOLQ6UXV4 268 aa1.77□□□□□ -2.13
TARDBP-220ENST00000618606 TIFABQ6ZNK6 161 aa1.77□□□□□ -2.13
TARDBP-220ENST00000618606 HSD11B1LQ7Z5J1 315 aa1.77□□□□□ -2.13
TARDBP-220ENST00000618606 ANKRD37Q7Z713 158 aa1.77□□□□□ -2.13
TARDBP-220ENST00000618606 TMEM17Q86X19 198 aa1.77□□□□□ -2.13
TARDBP-220ENST00000618606 ENTHD1Q8IYW4 607 aa1.77□□□□□ -2.13
TARDBP-220ENST00000618606 SLC22A18ASQ8N1D0 253 aa1.77□□□□□ -2.13
TARDBP-220ENST00000618606 LRRC75A-AS1Q8N1F1 130 aa1.77□□□□□ -2.13
TARDBP-220ENST00000618606 Q8N9L7 120 aa1.77□□□□□ -2.13
TARDBP-220ENST00000618606 OR52K2Q8NGK3 314 aa1.77□□□□□ -2.13
TARDBP-220ENST00000618606 OR4D5Q8NGN0 318 aa1.77□□□□□ -2.13
TARDBP-220ENST00000618606 COQ2Q96H96 371 aa1.77□□□□□ -2.13
TARDBP-220ENST00000618606 TGM7Q96PF1 710 aa1.77□□□□□ -2.13
TARDBP-220ENST00000618606 FAM173AQ9BQD7 235 aa1.77□□□□□ -2.13
TARDBP-220ENST00000618606 SCRT1Q9BWW7 348 aa1.77□□□□□ -2.13
TARDBP-220ENST00000618606 COMMD4Q9H0A8 199 aa1.77□□□□□ -2.13
TARDBP-220ENST00000618606 SLC17A5Q9NRA2 495 aa1.77□□□□□ -2.13
TARDBP-220ENST00000618606 ETNK2Q9NVF9 386 aa1.77□□□□□ -2.13
TARDBP-220ENST00000618606 DDX18Q9NVP1 670 aaKnown RBP1.77□□□□□ -2.13
TARDBP-220ENST00000618606 SMOXQ9NWM0 555 aa1.77□□□□□ -2.13
TARDBP-220ENST00000618606 SIGLEC8Q9NYZ4 499 aa1.77□□□□□ -2.13
TARDBP-220ENST00000618606 IL36GQ9NZH8 169 aa1.77□□□□□ -2.13
TARDBP-220ENST00000618606 PIPOXQ9P0Z9 390 aa1.77□□□□□ -2.13
TARDBP-220ENST00000618606 RCOR3Q9P2K3 495 aaPredicted RBP1.77□□□□□ -2.13
TARDBP-220ENST00000618606 SEC14L4Q9UDX3 406 aa1.77□□□□□ -2.13
TARDBP-220ENST00000618606 PCSK1NQ9UHG2 260 aa1.77□□□□□ -2.13
TARDBP-220ENST00000618606 CDH9Q9ULB4 789 aa1.77□□□□□ -2.13
TARDBP-220ENST00000618606 WDR45Q9Y484 360 aa1.77□□□□□ -2.13
TARDBP-220ENST00000618606 SLCO1B1Q9Y6L6 691 aa1.77□□□□□ -2.13
TARDBP-220ENST00000618606 PINLYPA6NC86 204 aa1.76□□□□□ -2.13
TARDBP-220ENST00000618606 SAP18O00422 153 aaKnown RBP1.76□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms