RNA–Protein interactions for RNA: ENST00000618395.4

COL5A1-208, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL5A1, Length 8,437 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-208ENST00000618395 ZNF724A8MTY0 619 aa14.18□□□□□ -0.14
COL5A1-208ENST00000618395 RFPL4AL1F8VTS6 287 aa14.18□□□□□ -0.14
COL5A1-208ENST00000618395 AKR1C1Q04828 323 aa14.18□□□□□ -0.14
COL5A1-208ENST00000618395 GPR17Q13304 367 aa14.18□□□□□ -0.14
COL5A1-208ENST00000618395 ETV3LQ6ZN32 361 aa14.18□□□□□ -0.14
COL5A1-208ENST00000618395 CPXM2Q8N436 756 aa14.18□□□□□ -0.14
COL5A1-208ENST00000618395 OR4K15Q8NH41 348 aa14.18□□□□□ -0.14
COL5A1-208ENST00000618395 MSLNLQ96KJ4 702 aa14.18□□□□□ -0.14
COL5A1-208ENST00000618395 INPP5EQ9NRR6 644 aa14.18□□□□□ -0.14
COL5A1-208ENST00000618395 A0A1W2PQH9 124 aa14.18□□□□□ -0.14
COL5A1-208ENST00000618395 SNNO75324 88 aaPredicted RBP14.18□□□□□ -0.14
COL5A1-208ENST00000618395 UBL3O95164 117 aa14.18□□□□□ -0.14
COL5A1-208ENST00000618395 KCNK5O95279 499 aa14.18□□□□□ -0.14
COL5A1-208ENST00000618395 CD80P33681 288 aa14.18□□□□□ -0.14
COL5A1-208ENST00000618395 ACSM1Q08AH1 577 aa14.18□□□□□ -0.14
COL5A1-208ENST00000618395 RCAN2Q14206 197 aa14.18□□□□□ -0.14
COL5A1-208ENST00000618395 COL19A1Q14993 1142 aa14.18□□□□□ -0.14
COL5A1-208ENST00000618395 FAM180BQ6P0A1 224 aa14.18□□□□□ -0.14
COL5A1-208ENST00000618395 ZNF704Q6ZNC4 412 aaPredicted RBP14.18□□□□□ -0.14
COL5A1-208ENST00000618395 RAB8BQ92930 207 aa14.18□□□□□ -0.14
COL5A1-208ENST00000618395 SEC22AQ96IW7 307 aa14.18□□□□□ -0.14
COL5A1-208ENST00000618395 NDRG2Q9UN36 371 aaKnown RBP14.18□□□□□ -0.14
COL5A1-208ENST00000618395 PLA2G15Q8NCC3 412 aa14.18□□□□□ -0.14
COL5A1-208ENST00000618395 OR5D14Q8NGL3 314 aa14.18□□□□□ -0.14
COL5A1-208ENST00000618395 SEMA4GQ9NTN9 838 aa14.18□□□□□ -0.14
COL5A1-208ENST00000618395 FBXW11Q9UKB1 542 aa14.18□□□□□ -0.14
COL5A1-208ENST00000618395 OR5H14A6NHG9 310 aa14.18□□□□□ -0.14
COL5A1-208ENST00000618395 PMM2O15305 246 aa14.18□□□□□ -0.14
COL5A1-208ENST00000618395 GBAP04062 536 aa14.18□□□□□ -0.14
COL5A1-208ENST00000618395 NECAP1Q8NC96 275 aa14.18□□□□□ -0.14
COL5A1-208ENST00000618395 OR13C9Q8NGT0 318 aa14.18□□□□□ -0.14
COL5A1-208ENST00000618395 ALG12Q9BV10 488 aa14.18□□□□□ -0.14
COL5A1-208ENST00000618395 OR51I2Q9H344 312 aa14.18□□□□□ -0.14
COL5A1-208ENST00000618395 PGAP2Q9UHJ9 254 aa14.18□□□□□ -0.14
COL5A1-208ENST00000618395 RIMS3Q9UJD0 308 aa14.18□□□□□ -0.14
COL5A1-208ENST00000618395 MDC1Q14676 2089 aaKnown RBP14.18□□□□□ -0.14
COL5A1-208ENST00000618395 AP1G1O43747 822 aa14.18□□□□□ -0.14
COL5A1-208ENST00000618395 QDPRP09417 244 aa14.18□□□□□ -0.14
COL5A1-208ENST00000618395 UNGP13051 313 aaPredicted RBP14.18□□□□□ -0.14
COL5A1-208ENST00000618395 HOXA1P49639 335 aaPredicted RBP14.18□□□□□ -0.14
COL5A1-208ENST00000618395 SRPXP78539 464 aa14.18□□□□□ -0.14
COL5A1-208ENST00000618395 PLP2Q04941 152 aa14.18□□□□□ -0.14
COL5A1-208ENST00000618395 HAGHQ16775 308 aa14.18□□□□□ -0.14
COL5A1-208ENST00000618395 C2CD4AQ8NCU7 369 aaPredicted RBP14.18□□□□□ -0.14
COL5A1-208ENST00000618395 TRMT2BQ96GJ1 504 aaKnown RBP14.18□□□□□ -0.14
COL5A1-208ENST00000618395 SLC25A21Q9BQT8 299 aaPredicted RBP14.18□□□□□ -0.14
COL5A1-208ENST00000618395 PCDHGC4Q9Y5F7 938 aa14.18□□□□□ -0.14
COL5A1-208ENST00000618395 CACNA1SQ13698 1873 aa14.18□□□□□ -0.14
COL5A1-208ENST00000618395 OR6C76A6NM76 312 aa14.18□□□□□ -0.14
COL5A1-208ENST00000618395 GABRPO00591 440 aa14.18□□□□□ -0.14
COL5A1-208ENST00000618395 OR4D2P58180 307 aa14.18□□□□□ -0.14
COL5A1-208ENST00000618395 GDPD4Q6W3E5 623 aa14.18□□□□□ -0.14
COL5A1-208ENST00000618395 FBXW12Q6X9E4 464 aa14.18□□□□□ -0.14
COL5A1-208ENST00000618395 TMEM104Q8NE00 496 aa14.18□□□□□ -0.14
COL5A1-208ENST00000618395 PRO1933Q9H354 126 aa14.18□□□□□ -0.14
COL5A1-208ENST00000618395 NTSR2O95665 410 aa14.18□□□□□ -0.14
COL5A1-208ENST00000618395 MTHFD2P13995 350 aa14.18□□□□□ -0.14
COL5A1-208ENST00000618395 CARD18P57730 90 aa14.18□□□□□ -0.14
COL5A1-208ENST00000618395 CCINQ13939 588 aa14.18□□□□□ -0.14
COL5A1-208ENST00000618395 KDELC1Q6UW63 502 aa14.18□□□□□ -0.14
COL5A1-208ENST00000618395 CDS1Q92903 461 aa14.18□□□□□ -0.14
COL5A1-208ENST00000618395 ARHGEF28Q8N1W1 1705 aaKnown RBP14.17□□□□□ -0.14
COL5A1-208ENST00000618395 I6L893 689 aaPredicted RBP14.17□□□□□ -0.14
COL5A1-208ENST00000618395 GPR39O43194 453 aa14.17□□□□□ -0.14
COL5A1-208ENST00000618395 ARNTP27540 789 aa14.17□□□□□ -0.14
COL5A1-208ENST00000618395 OC90Q02509 493 aaPredicted RBP14.17□□□□□ -0.14
COL5A1-208ENST00000618395 FFAR4Q5NUL3 377 aa14.17□□□□□ -0.14
COL5A1-208ENST00000618395 OR14L1PQ8NHC6 308 aa14.17□□□□□ -0.14
COL5A1-208ENST00000618395 PRAP1Q96NZ9 151 aa14.17□□□□□ -0.14
COL5A1-208ENST00000618395 DDOQ99489 341 aa14.17□□□□□ -0.14
COL5A1-208ENST00000618395 ELF4Q99607 663 aaPredicted RBP14.17□□□□□ -0.14
COL5A1-208ENST00000618395 DDX31Q9H8H2 851 aaKnown RBP14.17□□□□□ -0.14
COL5A1-208ENST00000618395 H2AFB1P0C5Y9 115 aa14.17□□□□□ -0.14
COL5A1-208ENST00000618395 MALLQ13021 153 aa14.17□□□□□ -0.14
COL5A1-208ENST00000618395 PDCD2LQ9BRP1 358 aa14.17□□□□□ -0.14
COL5A1-208ENST00000618395 CPA4Q9UI42 421 aa14.17□□□□□ -0.14
COL5A1-208ENST00000618395 AK3Q9UIJ7 227 aa14.17□□□□□ -0.14
COL5A1-208ENST00000618395 PCDHGA9Q9Y5G4 932 aaKnown RBP14.17□□□□□ -0.14
COL5A1-208ENST00000618395 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.17□□□□□ -0.14
COL5A1-208ENST00000618395 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.17□□□□□ -0.14
COL5A1-208ENST00000618395 C4BPAP04003 597 aaKnown RBP14.17□□□□□ -0.14
COL5A1-208ENST00000618395 GDNFP39905 211 aa14.17□□□□□ -0.14
COL5A1-208ENST00000618395 SLC11A1P49279 550 aa14.17□□□□□ -0.14
COL5A1-208ENST00000618395 CDC20Q12834 499 aa14.17□□□□□ -0.14
COL5A1-208ENST00000618395 EXOSC2Q13868 293 aaKnown RBP14.17□□□□□ -0.14
COL5A1-208ENST00000618395 GLYR1Q49A26 553 aaPredicted RBP14.17□□□□□ -0.14
COL5A1-208ENST00000618395 SBSNQ6UWP8 590 aa14.17□□□□□ -0.14
COL5A1-208ENST00000618395 TMIGD1Q6UXZ0 262 aa14.17□□□□□ -0.14
COL5A1-208ENST00000618395 SLC5A8Q8N695 610 aa14.17□□□□□ -0.14
COL5A1-208ENST00000618395 HERVK_113Q902F9 699 aa14.17□□□□□ -0.14
COL5A1-208ENST00000618395 PSMG2Q969U7 264 aa14.17□□□□□ -0.14
COL5A1-208ENST00000618395 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.17□□□□□ -0.14
COL5A1-208ENST00000618395 PIKFYVEQ9Y2I7 2098 aa14.17□□□□□ -0.14
COL5A1-208ENST00000618395 TMEM225BP0DP42 221 aa14.17□□□□□ -0.14
COL5A1-208ENST00000618395 SLC2A1P11166 492 aa14.17□□□□□ -0.14
COL5A1-208ENST00000618395 PKIAP61925 76 aa14.17□□□□□ -0.14
COL5A1-208ENST00000618395 RPS18P62269 152 aaKnown RBP14.17□□□□□ -0.14
COL5A1-208ENST00000618395 MS4A2Q01362 244 aa14.17□□□□□ -0.14
COL5A1-208ENST00000618395 EID2Q8N6I1 236 aa14.17□□□□□ -0.14
COL5A1-208ENST00000618395 OR1J1Q8NGS3 322 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms