RNA–Protein interactions for RNA: ENST00000617271.4

PCDH15-231, Transcript of protocadherin related 15, human

APPRIS P3 TSL 5 BASIC

Gene PCDH15, Length 6,425 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCDH15-231	ENST00000617271	IER3IP1	Q9Y5U9	82 aa		6.91	□□□□□ -1.3
PCDH15-231	ENST00000617271	ZNF814	B7Z6K7	855 aa		6.91	□□□□□ -1.3
PCDH15-231	ENST00000617271	DENR	O43583	198 aa	Known RBP	6.91	□□□□□ -1.3
PCDH15-231	ENST00000617271	TSPAN15	O95858	294 aa		6.91	□□□□□ -1.3
PCDH15-231	ENST00000617271	LAMP1	P11279	417 aa		6.91	□□□□□ -1.3
PCDH15-231	ENST00000617271	GABRR1	P24046	479 aa		6.91	□□□□□ -1.3
PCDH15-231	ENST00000617271	MMP12	P39900	470 aa		6.91	□□□□□ -1.3
PCDH15-231	ENST00000617271	HLCS	P50747	726 aa		6.91	□□□□□ -1.3
PCDH15-231	ENST00000617271	RPE65	Q16518	533 aa		6.91	□□□□□ -1.3
PCDH15-231	ENST00000617271	TBC1D28	Q2M2D7	210 aa		6.91	□□□□□ -1.3
PCDH15-231	ENST00000617271	SLC35G1	Q2M3R5	365 aa		6.91	□□□□□ -1.3
PCDH15-231	ENST00000617271	KIAA1211L	Q6NV74	962 aa		6.91	□□□□□ -1.3
PCDH15-231	ENST00000617271	HSD11B1L	Q7Z5J1	315 aa		6.91	□□□□□ -1.3
PCDH15-231	ENST00000617271	CLECL1	Q8IZS7	167 aa		6.91	□□□□□ -1.3
PCDH15-231	ENST00000617271	CD200R1	Q8TD46	325 aa		6.91	□□□□□ -1.3
PCDH15-231	ENST00000617271	DCUN1D4	Q92564	292 aa		6.91	□□□□□ -1.3
PCDH15-231	ENST00000617271	ARL11	Q969Q4	196 aa		6.91	□□□□□ -1.3
PCDH15-231	ENST00000617271	DNAJA3	Q96EY1	480 aa		6.91	□□□□□ -1.3
PCDH15-231	ENST00000617271	BEX2	Q9BXY8	128 aa		6.91	□□□□□ -1.3
PCDH15-231	ENST00000617271	BEX1	Q9HBH7	125 aa		6.91	□□□□□ -1.3
PCDH15-231	ENST00000617271	HHLA2	Q9UM44	414 aa		6.91	□□□□□ -1.3
PCDH15-231	ENST00000617271	WDR37	Q9Y2I8	494 aa		6.91	□□□□□ -1.3
PCDH15-231	ENST00000617271	MBLAC1	A4D2B0	266 aa	Predicted RBP	6.91	□□□□□ -1.3
PCDH15-231	ENST00000617271	ZNF705E	A8MWA4	302 aa	Predicted RBP	6.91	□□□□□ -1.3
PCDH15-231	ENST00000617271	MEN1	O00255	615 aa		6.91	□□□□□ -1.3
PCDH15-231	ENST00000617271	NFYA	P23511	347 aa	Predicted RBP	6.91	□□□□□ -1.3
PCDH15-231	ENST00000617271	NTHL1	P78549	312 aa		6.91	□□□□□ -1.3
PCDH15-231	ENST00000617271	TNFRSF17	Q02223	184 aa		6.91	□□□□□ -1.3
PCDH15-231	ENST00000617271	STEAP3	Q658P3	488 aa		6.91	□□□□□ -1.3
PCDH15-231	ENST00000617271	ZNF454	Q8N9F8	522 aa		6.91	□□□□□ -1.3
PCDH15-231	ENST00000617271	BIRC8	Q96P09	236 aa		6.91	□□□□□ -1.3
PCDH15-231	ENST00000617271	CMSS1	Q9BQ75	279 aa	Known RBP	6.91	□□□□□ -1.3
PCDH15-231	ENST00000617271	NICN1	Q9BSH3	213 aa		6.91	□□□□□ -1.3
PCDH15-231	ENST00000617271	SOX17	Q9H6I2	414 aa	Predicted RBP	6.91	□□□□□ -1.3
PCDH15-231	ENST00000617271	AGPAT4	Q9NRZ5	378 aa		6.91	□□□□□ -1.3
PCDH15-231	ENST00000617271	MOK	Q9UQ07	419 aa		6.91	□□□□□ -1.3
PCDH15-231	ENST00000617271	ARFGEF2	Q9Y6D5	1785 aa		6.91	□□□□□ -1.3
PCDH15-231	ENST00000617271	SMIM30	A4D0T7	59 aa		6.91	□□□□□ -1.3
PCDH15-231	ENST00000617271		H3BQ06	376 aa	Predicted RBP	6.91	□□□□□ -1.3
PCDH15-231	ENST00000617271	PTGES	O14684	152 aa		6.91	□□□□□ -1.3
PCDH15-231	ENST00000617271	FANCG	O15287	622 aa		6.91	□□□□□ -1.3
PCDH15-231	ENST00000617271	SSX4	O60224	188 aa		6.91	□□□□□ -1.3
PCDH15-231	ENST00000617271	CBX7	O95931	251 aa		6.91	□□□□□ -1.3
PCDH15-231	ENST00000617271	ZNF44	P15621	663 aa		6.91	□□□□□ -1.3
PCDH15-231	ENST00000617271	CD79B	P40259	229 aa		6.91	□□□□□ -1.3
PCDH15-231	ENST00000617271	CAV2	P51636	162 aa		6.91	□□□□□ -1.3
PCDH15-231	ENST00000617271	ZNF136	P52737	540 aa		6.91	□□□□□ -1.3
PCDH15-231	ENST00000617271	KCNJ8	Q15842	424 aa		6.91	□□□□□ -1.3
PCDH15-231	ENST00000617271	SFT2D3	Q587I9	215 aa		6.91	□□□□□ -1.3
PCDH15-231	ENST00000617271	LIPI	Q6XZB0	460 aa		6.91	□□□□□ -1.3
PCDH15-231	ENST00000617271	NAA40	Q86UY6	237 aa		6.91	□□□□□ -1.3
PCDH15-231	ENST00000617271	SLC6A18	Q96N87	628 aa		6.91	□□□□□ -1.3
PCDH15-231	ENST00000617271	LMF1	Q96S06	567 aa		6.91	□□□□□ -1.3
PCDH15-231	ENST00000617271	VN1R3	Q9BXE9	311 aa		6.91	□□□□□ -1.3
PCDH15-231	ENST00000617271	ARL6	Q9H0F7	186 aa		6.91	□□□□□ -1.3
PCDH15-231	ENST00000617271	NIPAL2	Q9H841	368 aa		6.91	□□□□□ -1.3
PCDH15-231	ENST00000617271	ATP13A2	Q9NQ11	1180 aa		6.91	□□□□□ -1.3
PCDH15-231	ENST00000617271	ARMC1	Q9NVT9	282 aa		6.91	□□□□□ -1.3
PCDH15-231	ENST00000617271	C14orf119	Q9NWQ9	140 aa		6.91	□□□□□ -1.3
PCDH15-231	ENST00000617271	COQ3	Q9NZJ6	369 aa		6.91	□□□□□ -1.3
PCDH15-231	ENST00000617271	ZNF736	B4DX44	427 aa	Predicted RBP	6.9	□□□□□ -1.3
PCDH15-231	ENST00000617271	ZNF587B	E7ETH6	402 aa		6.9	□□□□□ -1.3
PCDH15-231	ENST00000617271	SNAP29	O95721	258 aa		6.9	□□□□□ -1.3
PCDH15-231	ENST00000617271	STS	P08842	583 aa		6.9	□□□□□ -1.3
PCDH15-231	ENST00000617271	FKBP2	P26885	142 aa	Known RBP	6.9	□□□□□ -1.3
PCDH15-231	ENST00000617271	HTR5A	P47898	357 aa		6.9	□□□□□ -1.3
PCDH15-231	ENST00000617271	PTH2R	P49190	550 aa		6.9	□□□□□ -1.3
PCDH15-231	ENST00000617271	LGALS4	P56470	323 aa		6.9	□□□□□ -1.3
PCDH15-231	ENST00000617271	PPP1R8	Q12972	351 aa	Known RBP	6.9	□□□□□ -1.3
PCDH15-231	ENST00000617271	AARD	Q4LEZ3	155 aa		6.9	□□□□□ -1.3
PCDH15-231	ENST00000617271	UBE2NL	Q5JXB2	153 aa		6.9	□□□□□ -1.3
PCDH15-231	ENST00000617271	GARNL3	Q5VVW2	1013 aa		6.9	□□□□□ -1.3
PCDH15-231	ENST00000617271	CD300LG	Q6UXG3	332 aa		6.9	□□□□□ -1.3
PCDH15-231	ENST00000617271	ADAMTSL4	Q6UY14	1074 aa		6.9	□□□□□ -1.3
PCDH15-231	ENST00000617271	WDR88	Q6ZMY6	472 aa		6.9	□□□□□ -1.3
PCDH15-231	ENST00000617271	ZNF551	Q7Z340	670 aa	Predicted RBP	6.9	□□□□□ -1.3
PCDH15-231	ENST00000617271	RNF113B	Q8IZP6	322 aa	Known RBP	6.9	□□□□□ -1.3
PCDH15-231	ENST00000617271	OR5D16	Q8NGK9	328 aa		6.9	□□□□□ -1.3
PCDH15-231	ENST00000617271	OR5K2	Q8NHB8	316 aa		6.9	□□□□□ -1.3
PCDH15-231	ENST00000617271	TOMM40L	Q969M1	308 aa		6.9	□□□□□ -1.3
PCDH15-231	ENST00000617271	CIDEC	Q96AQ7	238 aa	Predicted RBP	6.9	□□□□□ -1.3
PCDH15-231	ENST00000617271	OCSTAMP	Q9BR26	566 aa		6.9	□□□□□ -1.3
PCDH15-231	ENST00000617271	NTMT1	Q9BV86	223 aa		6.9	□□□□□ -1.3
PCDH15-231	ENST00000617271	ST6GALNAC5	Q9BVH7	336 aa		6.9	□□□□□ -1.3
PCDH15-231	ENST00000617271	BOC	Q9BWV1	1114 aa		6.9	□□□□□ -1.3
PCDH15-231	ENST00000617271	EGLN1	Q9GZT9	426 aa		6.9	□□□□□ -1.3
PCDH15-231	ENST00000617271		A0A1W2PPV4	95 aa		6.9	□□□□□ -1.3
PCDH15-231	ENST00000617271	ZNF891	A8MT65	544 aa	Predicted RBP	6.9	□□□□□ -1.3
PCDH15-231	ENST00000617271	SUSD5	O60279	629 aa		6.9	□□□□□ -1.3
PCDH15-231	ENST00000617271	GMDS	O60547	372 aa		6.9	□□□□□ -1.3
PCDH15-231	ENST00000617271	RAB3D	O95716	219 aa		6.9	□□□□□ -1.3
PCDH15-231	ENST00000617271	GPR75	O95800	540 aa		6.9	□□□□□ -1.3
PCDH15-231	ENST00000617271	KITLG	P21583	273 aa		6.9	□□□□□ -1.3
PCDH15-231	ENST00000617271	MYF6	P23409	242 aa		6.9	□□□□□ -1.3
PCDH15-231	ENST00000617271	ZNF140	P52738	457 aa	Predicted RBP	6.9	□□□□□ -1.3
PCDH15-231	ENST00000617271	ERVPABLB-1	P60509	514 aa		6.9	□□□□□ -1.3
PCDH15-231	ENST00000617271	SRPX	P78539	464 aa		6.9	□□□□□ -1.3
PCDH15-231	ENST00000617271	CTBS	Q01459	385 aa		6.9	□□□□□ -1.3
PCDH15-231	ENST00000617271	LPCAT3	Q6P1A2	487 aa		6.9	□□□□□ -1.3
PCDH15-231	ENST00000617271	SULF2	Q8IWU5	870 aa		6.9	□□□□□ -1.3

Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms