RNA–Protein interactions for RNA: ENST00000617246.4

LPP-220, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPP, Length 18,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-220ENST00000617246 PROB1E7EW31 1015 aa3.12□□□□□ -1.91
LPP-220ENST00000617246 H7C2Y5 167 aa3.12□□□□□ -1.91
LPP-220ENST00000617246 CALCAP01258 141 aa3.12□□□□□ -1.91
LPP-220ENST00000617246 ZNF728P0DKX0 622 aa3.12□□□□□ -1.91
LPP-220ENST00000617246 DSCR4P56555 118 aaPredicted RBP3.12□□□□□ -1.91
LPP-220ENST00000617246 RRAS2P62070 204 aaPredicted RBP3.12□□□□□ -1.91
LPP-220ENST00000617246 HERVK_113P63132 956 aa3.12□□□□□ -1.91
LPP-220ENST00000617246 ERVK-8P63133 956 aa3.12□□□□□ -1.91
LPP-220ENST00000617246 EIF2B1Q14232 305 aaKnown RBP3.12□□□□□ -1.91
LPP-220ENST00000617246 BCL2A1Q16548 175 aa3.12□□□□□ -1.91
LPP-220ENST00000617246 C1orf146Q5VVC0 180 aa3.12□□□□□ -1.91
LPP-220ENST00000617246 GID4Q8IVV7 300 aa3.12□□□□□ -1.91
LPP-220ENST00000617246 MAML2Q8IZL2 1156 aaPredicted RBP3.12□□□□□ -1.91
LPP-220ENST00000617246 OR52K1Q8NGK4 314 aa3.12□□□□□ -1.91
LPP-220ENST00000617246 CLEC4DQ8WXI8 215 aa3.12□□□□□ -1.91
LPP-220ENST00000617246 FGGYQ96C11 551 aa3.12□□□□□ -1.91
LPP-220ENST00000617246 ERVK-6Q9BXR3 956 aa3.12□□□□□ -1.91
LPP-220ENST00000617246 ERVK-19Q9WJR5 959 aa3.12□□□□□ -1.91
LPP-220ENST00000617246 RDH16O75452 317 aa3.12□□□□□ -1.91
LPP-220ENST00000617246 FBP1P09467 338 aa3.12□□□□□ -1.91
LPP-220ENST00000617246 COMTP21964 271 aa3.12□□□□□ -1.91
LPP-220ENST00000617246 ECI1P42126 302 aa3.12□□□□□ -1.91
LPP-220ENST00000617246 PRSS12P56730 875 aa3.12□□□□□ -1.91
LPP-220ENST00000617246 OR1D5P58170 312 aa3.12□□□□□ -1.91
LPP-220ENST00000617246 MGAT3Q09327 533 aa3.12□□□□□ -1.91
LPP-220ENST00000617246 CDONQ4KMG0 1287 aa3.12□□□□□ -1.91
LPP-220ENST00000617246 LDB1Q86U70 411 aaPredicted RBP3.12□□□□□ -1.91
LPP-220ENST00000617246 OXER1Q8TDS5 423 aa3.12□□□□□ -1.91
LPP-220ENST00000617246 PERPQ96FX8 193 aa3.12□□□□□ -1.91
LPP-220ENST00000617246 FCRL5Q96RD9 977 aa3.12□□□□□ -1.91
LPP-220ENST00000617246 MND1Q9BWT6 205 aa3.12□□□□□ -1.91
LPP-220ENST00000617246 WDR54Q9H977 334 aa3.12□□□□□ -1.91
LPP-220ENST00000617246 CARD8Q9Y2G2 431 aa3.12□□□□□ -1.91
LPP-220ENST00000617246 CXorf51AA0A1B0GTR3 108 aa3.12□□□□□ -1.91
LPP-220ENST00000617246 LNP1A1A4G5 178 aa3.12□□□□□ -1.91
LPP-220ENST00000617246 IL1RNP18510 177 aa3.12□□□□□ -1.91
LPP-220ENST00000617246 BLVRBP30043 206 aaPredicted RBP3.12□□□□□ -1.91
LPP-220ENST00000617246 MAP2K3P46734 347 aa3.12□□□□□ -1.91
LPP-220ENST00000617246 GFRA1P56159 465 aa3.12□□□□□ -1.91
LPP-220ENST00000617246 FASTKQ14296 549 aaKnown RBP3.12□□□□□ -1.91
LPP-220ENST00000617246 TMEM52BQ4KMG9 183 aa3.12□□□□□ -1.91
LPP-220ENST00000617246 C1QTNF12Q5T7M4 302 aa3.12□□□□□ -1.91
LPP-220ENST00000617246 WDR59Q6PJI9 974 aa3.12□□□□□ -1.91
LPP-220ENST00000617246 CDRT4Q8N9R6 151 aa3.12□□□□□ -1.91
LPP-220ENST00000617246 CEP41Q9BYV8 373 aa3.12□□□□□ -1.91
LPP-220ENST00000617246 ZNF221Q9UK13 617 aa3.12□□□□□ -1.91
LPP-220ENST00000617246 COL4A1P02462 1669 aa3.12□□□□□ -1.91
LPP-220ENST00000617246 B4E171 279 aa3.12□□□□□ -1.91
LPP-220ENST00000617246 ANKRD63C9JTQ0 380 aa3.12□□□□□ -1.91
LPP-220ENST00000617246 H0Y8X5 98 aa3.12□□□□□ -1.91
LPP-220ENST00000617246 PRAMEF10O60809 474 aa3.12□□□□□ -1.91
LPP-220ENST00000617246 RYKP34925 604 aa3.12□□□□□ -1.91
LPP-220ENST00000617246 RAB8AP61006 207 aa3.12□□□□□ -1.91
LPP-220ENST00000617246 PCGF3Q3KNV8 242 aa3.12□□□□□ -1.91
LPP-220ENST00000617246 NHSL2Q5HYW2 709 aa3.12□□□□□ -1.91
LPP-220ENST00000617246 TRIQKQ629K1 86 aa3.12□□□□□ -1.91
LPP-220ENST00000617246 AAED1Q7RTV5 226 aa3.12□□□□□ -1.91
LPP-220ENST00000617246 SAP30LQ9HAJ7 183 aa3.12□□□□□ -1.91
LPP-220ENST00000617246 ZBTB20Q9HC78 741 aaPredicted RBP3.12□□□□□ -1.91
LPP-220ENST00000617246 RAXQ9Y2V3 346 aa3.12□□□□□ -1.91
LPP-220ENST00000617246 IGHG1P01857 330 aa3.12□□□□□ -1.91
LPP-220ENST00000617246 FABP3P05413 133 aa3.12□□□□□ -1.91
LPP-220ENST00000617246 TCF4P15884 667 aa3.12□□□□□ -1.91
LPP-220ENST00000617246 MSR1P21757 451 aa3.12□□□□□ -1.91
LPP-220ENST00000617246 DRD3P35462 400 aa3.12□□□□□ -1.91
LPP-220ENST00000617246 OR8G1Q15617 311 aa3.12□□□□□ -1.91
LPP-220ENST00000617246 CMPK2Q5EBM0 449 aa3.12□□□□□ -1.91
LPP-220ENST00000617246 RBPMS2Q6ZRY4 209 aaKnown RBP3.12□□□□□ -1.91
LPP-220ENST00000617246 ROPN1BQ9BZX4 212 aaPredicted RBP3.12□□□□□ -1.91
LPP-220ENST00000617246 ROPN1Q9HAT0 212 aaPredicted RBP3.12□□□□□ -1.91
LPP-220ENST00000617246 POLD4Q9HCU8 107 aa3.12□□□□□ -1.91
LPP-220ENST00000617246 FKBP14Q9NWM8 211 aa3.12□□□□□ -1.91
LPP-220ENST00000617246 KNG1P01042 644 aa3.12□□□□□ -1.91
LPP-220ENST00000617246 DCDC1P59894 354 aa3.12□□□□□ -1.91
LPP-220ENST00000617246 POU4F2Q12837 409 aa3.12□□□□□ -1.91
LPP-220ENST00000617246 BAIAP2L2Q6UXY1 529 aa3.12□□□□□ -1.91
LPP-220ENST00000617246 VRK2Q86Y07 508 aa3.12□□□□□ -1.91
LPP-220ENST00000617246 C17orf53Q8N3J3 647 aaPredicted RBP3.12□□□□□ -1.91
LPP-220ENST00000617246 CHST4Q8NCG5 386 aa3.12□□□□□ -1.91
LPP-220ENST00000617246 GPR21Q99679 349 aa3.12□□□□□ -1.91
LPP-220ENST00000617246 ABCG8Q9H221 673 aa3.12□□□□□ -1.91
LPP-220ENST00000617246 C6orf106Q9H6K1 298 aaPredicted RBP3.12□□□□□ -1.91
LPP-220ENST00000617246 CBLCQ9ULV8 474 aa3.12□□□□□ -1.91
LPP-220ENST00000617246 CBR3O75828 277 aa3.12□□□□□ -1.91
LPP-220ENST00000617246 HNRNPLP14866 589 aaKnown RBP eCLIP3.12□□□□□ -1.911e-7■■■□□ 19
LPP-220ENST00000617246 NPR2P20594 1047 aa3.12□□□□□ -1.91
LPP-220ENST00000617246 RGRP47804 291 aa3.12□□□□□ -1.91
LPP-220ENST00000617246 HMGA2P52926 109 aa3.12□□□□□ -1.91
LPP-220ENST00000617246 LAMTOR1Q6IAA8 161 aa3.12□□□□□ -1.91
LPP-220ENST00000617246 CLNKQ7Z7G1 428 aa3.12□□□□□ -1.91
LPP-220ENST00000617246 FBLIM1Q8WUP2 373 aa3.12□□□□□ -1.91
LPP-220ENST00000617246 ERGIC2Q96RQ1 377 aa3.12□□□□□ -1.91
LPP-220ENST00000617246 OCSTAMPQ9BR26 566 aa3.12□□□□□ -1.91
LPP-220ENST00000617246 NTN4Q9HB63 628 aa3.12□□□□□ -1.91
LPP-220ENST00000617246 PCOLCE2Q9UKZ9 415 aa3.12□□□□□ -1.91
LPP-220ENST00000617246 H3BMQ9 156 aa3.12□□□□□ -1.91
LPP-220ENST00000617246 SPINT3P49223 89 aa3.12□□□□□ -1.91
LPP-220ENST00000617246 CCNIQ14094 377 aa3.12□□□□□ -1.91
LPP-220ENST00000617246 PFKFB4Q16877 469 aa3.12□□□□□ -1.91
LPP-220ENST00000617246 RRN3P1Q2M238 152 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms