RNA–Protein interactions for RNA: ENST00000616710.4

TNFRSF11A-205, Transcript of TNF receptor superfamily member 11a, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF11A, Length 3,809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-205ENST00000616710 DCUN1D3Q8IWE4 304 aa13.08□□□□□ -0.32
TNFRSF11A-205ENST00000616710 ARMC10Q8N2F6 343 aa13.08□□□□□ -0.32
TNFRSF11A-205ENST00000616710 SYNPRQ8TBG9 265 aa13.08□□□□□ -0.32
TNFRSF11A-205ENST00000616710 ZNF350Q9GZX5 532 aa13.08□□□□□ -0.32
TNFRSF11A-205ENST00000616710 ESRP2Q9H6T0 727 aaKnown RBP13.08□□□□□ -0.32
TNFRSF11A-205ENST00000616710 SLC22A7Q9Y694 548 aa13.08□□□□□ -0.32
TNFRSF11A-205ENST00000616710 A0A1W2PRQ8 180 aa13.08□□□□□ -0.32
TNFRSF11A-205ENST00000616710 RIIAD1A6NNX1 92 aa13.08□□□□□ -0.32
TNFRSF11A-205ENST00000616710 PYCARD-AS1I3L0S3 204 aa13.08□□□□□ -0.32
TNFRSF11A-205ENST00000616710 DNASE2O00115 360 aaPredicted RBP13.08□□□□□ -0.32
TNFRSF11A-205ENST00000616710 SULT1C2O00338 296 aa13.08□□□□□ -0.32
TNFRSF11A-205ENST00000616710 ARL6IP5O75915 188 aa13.08□□□□□ -0.32
TNFRSF11A-205ENST00000616710 TGM6O95932 706 aa13.08□□□□□ -0.32
TNFRSF11A-205ENST00000616710 UQCRC2P22695 453 aa13.08□□□□□ -0.32
TNFRSF11A-205ENST00000616710 PFN3P60673 137 aa13.08□□□□□ -0.32
TNFRSF11A-205ENST00000616710 BAMBIQ13145 260 aa13.08□□□□□ -0.32
TNFRSF11A-205ENST00000616710 DYRK1AQ13627 763 aa13.08□□□□□ -0.32
TNFRSF11A-205ENST00000616710 KLHL26Q53HC5 615 aa13.08□□□□□ -0.32
TNFRSF11A-205ENST00000616710 PRSS55Q6UWB4 352 aaPredicted RBP13.08□□□□□ -0.32
TNFRSF11A-205ENST00000616710 NR2C2APQ86WQ0 139 aa13.08□□□□□ -0.32
TNFRSF11A-205ENST00000616710 VRK2Q86Y07 508 aa13.08□□□□□ -0.32
TNFRSF11A-205ENST00000616710 TBC1D19Q8N5T2 526 aa13.08□□□□□ -0.32
TNFRSF11A-205ENST00000616710 OR5T2Q8NGG2 359 aa13.08□□□□□ -0.32
TNFRSF11A-205ENST00000616710 SCLYQ96I15 445 aa13.08□□□□□ -0.32
TNFRSF11A-205ENST00000616710 FUBP3Q96I24 572 aaKnown RBP eCLIP13.08□□□□□ -0.32
TNFRSF11A-205ENST00000616710 HSPA12BQ96MM6 686 aa13.08□□□□□ -0.32
TNFRSF11A-205ENST00000616710 BHLHE41Q9C0J9 482 aaPredicted RBP13.08□□□□□ -0.32
TNFRSF11A-205ENST00000616710 LHX6Q9UPM6 363 aa13.08□□□□□ -0.32
TNFRSF11A-205ENST00000616710 AHDC1Q5TGY3 1603 aaPredicted RBP13.07□□□□□ -0.32
TNFRSF11A-205ENST00000616710 RNF224P0DH78 156 aa13.07□□□□□ -0.32
TNFRSF11A-205ENST00000616710 RORAP35398 523 aa13.07□□□□□ -0.32
TNFRSF11A-205ENST00000616710 DLSTP36957 453 aa13.07□□□□□ -0.32
TNFRSF11A-205ENST00000616710 MRPS6P82932 125 aaKnown RBP13.07□□□□□ -0.32
TNFRSF11A-205ENST00000616710 TGM3Q08188 693 aa13.07□□□□□ -0.32
TNFRSF11A-205ENST00000616710 C19orf48Q6RUI8 117 aa13.07□□□□□ -0.32
TNFRSF11A-205ENST00000616710 TFAP2EQ6VUC0 442 aa13.07□□□□□ -0.32
TNFRSF11A-205ENST00000616710 MSANTD1Q6ZTZ1 278 aa13.07□□□□□ -0.32
TNFRSF11A-205ENST00000616710 GALNTL5Q7Z4T8 443 aa13.07□□□□□ -0.32
TNFRSF11A-205ENST00000616710 CDH26Q8IXH8 852 aa13.07□□□□□ -0.32
TNFRSF11A-205ENST00000616710 PUSL1Q8N0Z8 303 aaKnown RBP13.07□□□□□ -0.32
TNFRSF11A-205ENST00000616710 MRPS24Q96EL2 167 aaKnown RBP13.07□□□□□ -0.32
TNFRSF11A-205ENST00000616710 KCNJ15Q99712 375 aa13.07□□□□□ -0.32
TNFRSF11A-205ENST00000616710 ZSCAN32Q9NX65 697 aa13.07□□□□□ -0.32
TNFRSF11A-205ENST00000616710 XIRP1Q702N8 1843 aaKnown RBP13.07□□□□□ -0.32
TNFRSF11A-205ENST00000616710 SNAI1O95863 264 aaPredicted RBP13.07□□□□□ -0.32
TNFRSF11A-205ENST00000616710 RECKO95980 971 aa13.07□□□□□ -0.32
TNFRSF11A-205ENST00000616710 GABRA1P14867 456 aa13.07□□□□□ -0.32
TNFRSF11A-205ENST00000616710 AP1S2P56377 157 aa13.07□□□□□ -0.32
TNFRSF11A-205ENST00000616710 NKAIN4Q8IVV8 208 aa13.07□□□□□ -0.32
TNFRSF11A-205ENST00000616710 CMTM4Q8IZR5 234 aa13.07□□□□□ -0.32
TNFRSF11A-205ENST00000616710 APCDD1Q8J025 514 aa13.07□□□□□ -0.32
TNFRSF11A-205ENST00000616710 OR1S2Q8NGQ3 325 aa13.07□□□□□ -0.32
TNFRSF11A-205ENST00000616710 OR14A16Q8NHC5 309 aa13.07□□□□□ -0.32
TNFRSF11A-205ENST00000616710 CD300LFQ8TDQ1 290 aa13.07□□□□□ -0.32
TNFRSF11A-205ENST00000616710 CCDC86Q9H6F5 360 aaKnown RBP13.07□□□□□ -0.32
TNFRSF11A-205ENST00000616710 PCDHB10Q9UN67 800 aa13.07□□□□□ -0.32
TNFRSF11A-205ENST00000616710 OR1F1O43749 312 aa13.07□□□□□ -0.32
TNFRSF11A-205ENST00000616710 GMFGO60234 142 aa13.07□□□□□ -0.32
TNFRSF11A-205ENST00000616710 ZNF750Q32MQ0 723 aa13.07□□□□□ -0.32
TNFRSF11A-205ENST00000616710 GPR33Q49SQ1 333 aa13.07□□□□□ -0.32
TNFRSF11A-205ENST00000616710 KRT77Q7Z794 578 aa13.07□□□□□ -0.32
TNFRSF11A-205ENST00000616710 ADAMTS15Q8TE58 950 aa13.07□□□□□ -0.32
TNFRSF11A-205ENST00000616710 ASB11Q8WXH4 323 aa13.07□□□□□ -0.32
TNFRSF11A-205ENST00000616710 SMPDL3AQ92484 453 aa13.07□□□□□ -0.32
TNFRSF11A-205ENST00000616710 USP36Q9P275 1121 aaKnown RBP13.07□□□□□ -0.32
TNFRSF11A-205ENST00000616710 PCDHB8Q9UN66 801 aa13.07□□□□□ -0.32
TNFRSF11A-205ENST00000616710 A0A0B4J2A0 478 aa13.06□□□□□ -0.32
TNFRSF11A-205ENST00000616710 C1orf226A1L170 272 aa13.06□□□□□ -0.32
TNFRSF11A-205ENST00000616710 OR6C65A6NJZ3 312 aa13.06□□□□□ -0.32
TNFRSF11A-205ENST00000616710 WASH4PA8MWX3 477 aa13.06□□□□□ -0.32
TNFRSF11A-205ENST00000616710 PTGFRP43088 359 aa13.06□□□□□ -0.32
TNFRSF11A-205ENST00000616710 FABP9Q0Z7S8 132 aa13.06□□□□□ -0.32
TNFRSF11A-205ENST00000616710 NDUFA9Q16795 377 aa13.06□□□□□ -0.32
TNFRSF11A-205ENST00000616710 PLPP6Q8IY26 295 aa13.06□□□□□ -0.32
TNFRSF11A-205ENST00000616710 OSTF1Q92882 214 aa13.06□□□□□ -0.32
TNFRSF11A-205ENST00000616710 VRK1Q99986 396 aaPredicted RBP13.06□□□□□ -0.32
TNFRSF11A-205ENST00000616710 SHPKQ9UHJ6 478 aa13.06□□□□□ -0.32
TNFRSF11A-205ENST00000616710 ABCA3Q99758 1704 aa13.06□□□□□ -0.32
TNFRSF11A-205ENST00000616710 TRAV18A0A075B6X5 111 aa13.06□□□□□ -0.32
TNFRSF11A-205ENST00000616710 LAMP2P13473 410 aa13.06□□□□□ -0.32
TNFRSF11A-205ENST00000616710 FGF9P31371 208 aaPredicted RBP13.06□□□□□ -0.32
TNFRSF11A-205ENST00000616710 MTNR1BP49286 362 aa13.06□□□□□ -0.32
TNFRSF11A-205ENST00000616710 FXYD6P3P58550 94 aa13.06□□□□□ -0.32
TNFRSF11A-205ENST00000616710 ST3GAL3Q11203 375 aa13.06□□□□□ -0.32
TNFRSF11A-205ENST00000616710 ZNF425Q6IV72 752 aa13.06□□□□□ -0.32
TNFRSF11A-205ENST00000616710 OR4E2Q8NGC2 313 aa13.06□□□□□ -0.32
TNFRSF11A-205ENST00000616710 GNPDA2Q8TDQ7 276 aa13.06□□□□□ -0.32
TNFRSF11A-205ENST00000616710 MAFIPQ8WZ33 124 aa13.06□□□□□ -0.32
TNFRSF11A-205ENST00000616710 GAL3ST3Q96A11 431 aa13.06□□□□□ -0.32
TNFRSF11A-205ENST00000616710 LMF1Q96S06 567 aa13.06□□□□□ -0.32
TNFRSF11A-205ENST00000616710 RIOK2Q9BVS4 552 aaKnown RBP13.06□□□□□ -0.32
TNFRSF11A-205ENST00000616710 MCOLN1Q9GZU1 580 aa13.06□□□□□ -0.32
TNFRSF11A-205ENST00000616710 NDRG3Q9UGV2 375 aa13.06□□□□□ -0.32
TNFRSF11A-205ENST00000616710 RBBP6Q7Z6E9 1792 aaKnown RBP13.06□□□□□ -0.32
TNFRSF11A-205ENST00000616710 CDHR4A6H8M9 788 aa13.06□□□□□ -0.32
TNFRSF11A-205ENST00000616710 CA12O43570 354 aa13.06□□□□□ -0.32
TNFRSF11A-205ENST00000616710 SULT1B1O43704 296 aa13.06□□□□□ -0.32
TNFRSF11A-205ENST00000616710 SEMG1P04279 462 aa13.06□□□□□ -0.32
TNFRSF11A-205ENST00000616710 GKN3PP0CG01 181 aa13.06□□□□□ -0.32
TNFRSF11A-205ENST00000616710 C6P13671 934 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms