RNA–Protein interactions for RNA: ENST00000616074.4

TRAPPC3-208, Transcript of trafficking protein particle complex 3, humanhuman

TSL 5 BASIC

Gene TRAPPC3, Length 1,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-208ENST00000616074 SPAG7O75391 227 aa18.45■□□□□ 0.54
TRAPPC3-208ENST00000616074 SKAP2O75563 359 aaPredicted RBP18.45■□□□□ 0.54
TRAPPC3-208ENST00000616074 LYPLA1O75608 230 aaPredicted RBP18.45■□□□□ 0.54
TRAPPC3-208ENST00000616074 ADAP00813 363 aa18.45■□□□□ 0.54
TRAPPC3-208ENST00000616074 YES1P07947 543 aa18.45■□□□□ 0.54
TRAPPC3-208ENST00000616074 SELENBP1Q13228 472 aa18.45■□□□□ 0.54
TRAPPC3-208ENST00000616074 LSM12Q3MHD2 195 aaKnown RBP18.45■□□□□ 0.54
TRAPPC3-208ENST00000616074 NCMAPQ5T1S8 102 aa18.45■□□□□ 0.54
TRAPPC3-208ENST00000616074 ATG4DQ86TL0 474 aaPredicted RBP18.45■□□□□ 0.54
TRAPPC3-208ENST00000616074 NATD1Q8N6N6 113 aa18.45■□□□□ 0.54
TRAPPC3-208ENST00000616074 TMCO5AQ8N6Q1 288 aa18.45■□□□□ 0.54
TRAPPC3-208ENST00000616074 NEUROG1Q92886 237 aa18.45■□□□□ 0.54
TRAPPC3-208ENST00000616074 KISS1RQ969F8 398 aaPredicted RBP18.45■□□□□ 0.54
TRAPPC3-208ENST00000616074 MOAP1Q96BY2 351 aa18.45■□□□□ 0.54
TRAPPC3-208ENST00000616074 MRGPRX4Q96LA9 322 aa18.45■□□□□ 0.54
TRAPPC3-208ENST00000616074 ING1Q9UK53 422 aaPredicted RBP18.45■□□□□ 0.54
TRAPPC3-208ENST00000616074 ZNF814B7Z6K7 855 aa18.44■□□□□ 0.54
TRAPPC3-208ENST00000616074 ZNF264O43296 627 aa18.44■□□□□ 0.54
TRAPPC3-208ENST00000616074 SOX30O94993 753 aa18.44■□□□□ 0.54
TRAPPC3-208ENST00000616074 CD3EP07766 207 aa18.44■□□□□ 0.54
TRAPPC3-208ENST00000616074 SOD3P08294 240 aa18.44■□□□□ 0.54
TRAPPC3-208ENST00000616074 CCR4P51679 360 aa18.44■□□□□ 0.54
TRAPPC3-208ENST00000616074 TNK1Q13470 666 aa18.44■□□□□ 0.54
TRAPPC3-208ENST00000616074 QPRTQ15274 297 aa18.44■□□□□ 0.54
TRAPPC3-208ENST00000616074 SLC25A53Q5H9E4 307 aa18.44■□□□□ 0.54
TRAPPC3-208ENST00000616074 SEZ6L2Q6UXD5 910 aa18.44■□□□□ 0.54
TRAPPC3-208ENST00000616074 RIMKLAQ8IXN7 391 aa18.44■□□□□ 0.54
TRAPPC3-208ENST00000616074 OR5W2Q8NH69 310 aa18.44■□□□□ 0.54
TRAPPC3-208ENST00000616074 TCP10LQ8TDR4 215 aa18.44■□□□□ 0.54
TRAPPC3-208ENST00000616074 HSD17B8Q92506 261 aa18.44■□□□□ 0.54
TRAPPC3-208ENST00000616074 FBXW5Q969U6 566 aa18.44■□□□□ 0.54
TRAPPC3-208ENST00000616074 SDF2Q99470 211 aa18.44■□□□□ 0.54
TRAPPC3-208ENST00000616074 PSD2Q9BQI7 771 aa18.44■□□□□ 0.54
TRAPPC3-208ENST00000616074 DUSP26Q9BV47 211 aa18.44■□□□□ 0.54
TRAPPC3-208ENST00000616074 BHLHE41Q9C0J9 482 aaPredicted RBP18.44■□□□□ 0.54
TRAPPC3-208ENST00000616074 ESRP2Q9H6T0 727 aaKnown RBP18.44■□□□□ 0.54
TRAPPC3-208ENST00000616074 ZDHHC2Q9UIJ5 367 aa18.44■□□□□ 0.54
TRAPPC3-208ENST00000616074 ESPNB1AK53 854 aa18.43■□□□□ 0.54
TRAPPC3-208ENST00000616074 OVOL3O00110 214 aa18.43■□□□□ 0.54
TRAPPC3-208ENST00000616074 CFLARO15519 480 aa18.43■□□□□ 0.54
TRAPPC3-208ENST00000616074 EIF4E2O60573 245 aaKnown RBP18.43■□□□□ 0.54
TRAPPC3-208ENST00000616074 DANCRP0C864 163 aa18.43■□□□□ 0.54
TRAPPC3-208ENST00000616074 UBL4AP11441 157 aa18.43■□□□□ 0.54
TRAPPC3-208ENST00000616074 SLC7A1P30825 629 aa18.43■□□□□ 0.54
TRAPPC3-208ENST00000616074 SOAT1P35610 550 aa18.43■□□□□ 0.54
TRAPPC3-208ENST00000616074 RAC3P60763 192 aa18.43■□□□□ 0.54
TRAPPC3-208ENST00000616074 RPS26P62854 115 aaKnown RBP18.43■□□□□ 0.54
TRAPPC3-208ENST00000616074 HBA1P69905 142 aa18.43■□□□□ 0.54
TRAPPC3-208ENST00000616074 KRTAP1-1Q07627 177 aa18.43■□□□□ 0.54
TRAPPC3-208ENST00000616074 ITGADQ13349 1161 aa18.43■□□□□ 0.54
TRAPPC3-208ENST00000616074 PDZK1Q5T2W1 519 aa18.43■□□□□ 0.54
TRAPPC3-208ENST00000616074 SLC43A2Q8N370 569 aa18.43■□□□□ 0.54
TRAPPC3-208ENST00000616074 RIBC1Q8N443 379 aaPredicted RBP18.43■□□□□ 0.54
TRAPPC3-208ENST00000616074 TOR1AIP2Q8NFQ8 470 aa18.43■□□□□ 0.54
TRAPPC3-208ENST00000616074 PRPF18Q99633 342 aaKnown RBP18.43■□□□□ 0.54
TRAPPC3-208ENST00000616074 MDFIQ99750 246 aa18.43■□□□□ 0.54
TRAPPC3-208ENST00000616074 POTEKPQ9BYX7 375 aa18.43■□□□□ 0.54
TRAPPC3-208ENST00000616074 SERHL2Q9H4I8 314 aa18.43■□□□□ 0.54
TRAPPC3-208ENST00000616074 BCO1Q9HAY6 547 aa18.43■□□□□ 0.54
TRAPPC3-208ENST00000616074 KLHL9Q9P2J3 617 aa18.43■□□□□ 0.54
TRAPPC3-208ENST00000616074 ETV2O00321 342 aaPredicted RBP18.42■□□□□ 0.54
TRAPPC3-208ENST00000616074 H6PDO95479 791 aa18.42■□□□□ 0.54
TRAPPC3-208ENST00000616074 PRPS1L1P21108 318 aa18.42■□□□□ 0.54
TRAPPC3-208ENST00000616074 EDNRAP25101 427 aa18.42■□□□□ 0.54
TRAPPC3-208ENST00000616074 SERPINB5P36952 375 aa18.42■□□□□ 0.54
TRAPPC3-208ENST00000616074 CBFBQ13951 182 aa18.42■□□□□ 0.54
TRAPPC3-208ENST00000616074 P2RY6Q15077 328 aa18.42■□□□□ 0.54
TRAPPC3-208ENST00000616074 CLEC12BQ2HXU8 276 aa18.42■□□□□ 0.54
TRAPPC3-208ENST00000616074 BHLHA15Q7RTS1 189 aaPredicted RBP18.42■□□□□ 0.54
TRAPPC3-208ENST00000616074 KBTBD8Q8NFY9 601 aa18.42■□□□□ 0.54
TRAPPC3-208ENST00000616074 NGBQ9NPG2 151 aa18.42■□□□□ 0.54
TRAPPC3-208ENST00000616074 PRSS50Q9UI38 385 aa18.42■□□□□ 0.54
TRAPPC3-208ENST00000616074 KCNE5Q9UJ90 142 aa18.42■□□□□ 0.54
TRAPPC3-208ENST00000616074 ADAM21Q9UKJ8 722 aa18.42■□□□□ 0.54
TRAPPC3-208ENST00000616074 MAGED1Q9Y5V3 778 aaPredicted RBP18.42■□□□□ 0.54
TRAPPC3-208ENST00000616074 CADP27708 2225 aa18.42■□□□□ 0.54
TRAPPC3-208ENST00000616074 CR1P17927 2039 aa18.42■□□□□ 0.54
TRAPPC3-208ENST00000616074 CENPVL1A0A0U1RR11 272 aa18.41■□□□□ 0.54
TRAPPC3-208ENST00000616074 SERINC4A6NH21 518 aa18.41■□□□□ 0.54
TRAPPC3-208ENST00000616074 SMAD9O15198 467 aaKnown RBP18.41■□□□□ 0.54
TRAPPC3-208ENST00000616074 G6PDP11413 515 aa18.41■□□□□ 0.54
TRAPPC3-208ENST00000616074 CDKN1AP38936 164 aa18.41■□□□□ 0.54
TRAPPC3-208ENST00000616074 OR3A2P47893 321 aa18.41■□□□□ 0.54
TRAPPC3-208ENST00000616074 BSPH1Q075Z2 132 aa18.41■□□□□ 0.54
TRAPPC3-208ENST00000616074 SKP2Q13309 424 aa18.41■□□□□ 0.54
TRAPPC3-208ENST00000616074 VEZF1Q14119 521 aa18.41■□□□□ 0.54
TRAPPC3-208ENST00000616074 GPR68Q15743 365 aa18.41■□□□□ 0.54
TRAPPC3-208ENST00000616074 ZNF672Q499Z4 452 aaPredicted RBP18.41■□□□□ 0.54
TRAPPC3-208ENST00000616074 TIGD2Q4W5G0 525 aa18.41■□□□□ 0.54
TRAPPC3-208ENST00000616074 C3orf33Q6P1S2 294 aa18.41■□□□□ 0.54
TRAPPC3-208ENST00000616074 Q6ZT83 130 aa18.41■□□□□ 0.54
TRAPPC3-208ENST00000616074 OLIG3Q7RTU3 272 aa18.41■□□□□ 0.54
TRAPPC3-208ENST00000616074 ZC3HAV1Q7Z2W4 902 aaKnown RBP18.41■□□□□ 0.54
TRAPPC3-208ENST00000616074 CLECL1Q8IZS7 167 aa18.41■□□□□ 0.54
TRAPPC3-208ENST00000616074 CLEC4FQ8N1N0 589 aa18.41■□□□□ 0.54
TRAPPC3-208ENST00000616074 MAPK1IP1LQ8NDC0 245 aa18.41■□□□□ 0.54
TRAPPC3-208ENST00000616074 PIWIL2Q8TC59 973 aaKnown RBP18.41■□□□□ 0.54
TRAPPC3-208ENST00000616074 SMAP2Q8WU79 429 aaPredicted RBP18.41■□□□□ 0.54
TRAPPC3-208ENST00000616074 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.41■□□□□ 0.54
TRAPPC3-208ENST00000616074 TUBGCP3Q96CW5 907 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms