RNA–Protein interactions for RNA: ENST00000615230.4

TNFRSF9-204, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFRSF9, Length 5,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-204ENST00000615230 ABHD11Q8NFV4 315 aa9.09□□□□□ -0.95
TNFRSF9-204ENST00000615230 OR51G2Q8NGK0 314 aa9.09□□□□□ -0.95
TNFRSF9-204ENST00000615230 SLC41A2Q96JW4 573 aa9.09□□□□□ -0.95
TNFRSF9-204ENST00000615230 OR4K3Q96R72 315 aa9.09□□□□□ -0.95
TNFRSF9-204ENST00000615230 TMED9Q9BVK6 235 aa9.09□□□□□ -0.95
TNFRSF9-204ENST00000615230 MED28Q9H204 178 aa9.09□□□□□ -0.95
TNFRSF9-204ENST00000615230 CCDC86Q9H6F5 360 aaKnown RBP9.09□□□□□ -0.95
TNFRSF9-204ENST00000615230 SLC6A20Q9NP91 592 aa9.09□□□□□ -0.95
TNFRSF9-204ENST00000615230 KLK10O43240 276 aa9.09□□□□□ -0.95
TNFRSF9-204ENST00000615230 ERVK-16P61578 105 aa9.09□□□□□ -0.95
TNFRSF9-204ENST00000615230 PPP1R3AQ16821 1122 aa9.09□□□□□ -0.95
TNFRSF9-204ENST00000615230 CNPY1Q3B7I2 92 aa9.09□□□□□ -0.95
TNFRSF9-204ENST00000615230 XKRXQ6PP77 449 aa9.09□□□□□ -0.95
TNFRSF9-204ENST00000615230 ZNF534Q76KX8 674 aa9.09□□□□□ -0.95
TNFRSF9-204ENST00000615230 SSX6Q7RTT6 188 aa9.09□□□□□ -0.95
TNFRSF9-204ENST00000615230 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.09□□□□□ -0.95
TNFRSF9-204ENST00000615230 OR5T2Q8NGG2 359 aa9.09□□□□□ -0.95
TNFRSF9-204ENST00000615230 TRMT10AQ8TBZ6 339 aaKnown RBP9.09□□□□□ -0.95
TNFRSF9-204ENST00000615230 WFDC5Q8TCV5 224 aa9.09□□□□□ -0.95
TNFRSF9-204ENST00000615230 ACOT11Q8WXI4 607 aaPredicted RBP9.09□□□□□ -0.95
TNFRSF9-204ENST00000615230 SENP5Q96HI0 755 aaPredicted RBP9.09□□□□□ -0.95
TNFRSF9-204ENST00000615230 FAM46AQ96IP4 442 aaKnown RBP9.09□□□□□ -0.95
TNFRSF9-204ENST00000615230 ZNF442Q9H7R0 627 aa9.09□□□□□ -0.95
TNFRSF9-204ENST00000615230 MED17Q9NVC6 651 aa9.09□□□□□ -0.95
TNFRSF9-204ENST00000615230 FAM118AQ9NWS6 357 aa9.09□□□□□ -0.95
TNFRSF9-204ENST00000615230 RHCGQ9UBD6 479 aa9.09□□□□□ -0.95
TNFRSF9-204ENST00000615230 CNOT11Q9UKZ1 510 aaKnown RBP9.09□□□□□ -0.95
TNFRSF9-204ENST00000615230 TCRBV5S1A1TA0A578 114 aa9.08□□□□□ -0.96
TNFRSF9-204ENST00000615230 H7C1Q1 480 aa9.08□□□□□ -0.96
TNFRSF9-204ENST00000615230 SLC33A1O00400 549 aaPredicted RBP9.08□□□□□ -0.96
TNFRSF9-204ENST00000615230 TIMM8AO60220 97 aaPredicted RBP9.08□□□□□ -0.96
TNFRSF9-204ENST00000615230 MYBPHQ13203 477 aa9.08□□□□□ -0.96
TNFRSF9-204ENST00000615230 KCTD19Q17RG1 926 aaPredicted RBP9.08□□□□□ -0.96
TNFRSF9-204ENST00000615230 ZNF613Q6PF04 617 aa9.08□□□□□ -0.96
TNFRSF9-204ENST00000615230 LRFN4Q6PJG9 635 aa9.08□□□□□ -0.96
TNFRSF9-204ENST00000615230 GFRALQ6UXV0 394 aa9.08□□□□□ -0.96
TNFRSF9-204ENST00000615230 CLECL1Q8IZS7 167 aa9.08□□□□□ -0.96
TNFRSF9-204ENST00000615230 TOMM5Q8N4H5 51 aa9.08□□□□□ -0.96
TNFRSF9-204ENST00000615230 ACBD7Q8N6N7 88 aa9.08□□□□□ -0.96
TNFRSF9-204ENST00000615230 NAXEQ8NCW5 288 aa9.08□□□□□ -0.96
TNFRSF9-204ENST00000615230 FCAMRQ8WWV6 532 aa9.08□□□□□ -0.96
TNFRSF9-204ENST00000615230 NECAB3Q96P71 396 aaPredicted RBP9.08□□□□□ -0.96
TNFRSF9-204ENST00000615230 PKMYT1Q99640 499 aa9.08□□□□□ -0.96
TNFRSF9-204ENST00000615230 DHCR7Q9UBM7 475 aaKnown RBP9.08□□□□□ -0.96
TNFRSF9-204ENST00000615230 TBC1D29Q9UFV1 150 aa9.08□□□□□ -0.96
TNFRSF9-204ENST00000615230 ANKRD31Q8N7Z5 1873 aa9.08□□□□□ -0.96
TNFRSF9-204ENST00000615230 ARFGEF1Q9Y6D6 1849 aa9.08□□□□□ -0.96
TNFRSF9-204ENST00000615230 MT-ND1P03886 318 aa9.08□□□□□ -0.96
TNFRSF9-204ENST00000615230 CISD3P0C7P0 127 aa9.08□□□□□ -0.96
TNFRSF9-204ENST00000615230 CKMT1AP12532 417 aa9.08□□□□□ -0.96
TNFRSF9-204ENST00000615230 AVPR2P30518 371 aa9.08□□□□□ -0.96
TNFRSF9-204ENST00000615230 OR1E2P47887 323 aa9.08□□□□□ -0.96
TNFRSF9-204ENST00000615230 APOFQ13790 326 aa9.08□□□□□ -0.96
TNFRSF9-204ENST00000615230 OR1Q1Q15612 314 aa9.08□□□□□ -0.96
TNFRSF9-204ENST00000615230 VWA2Q5GFL6 755 aa9.08□□□□□ -0.96
TNFRSF9-204ENST00000615230 SLC35F1Q5T1Q4 408 aa9.08□□□□□ -0.96
TNFRSF9-204ENST00000615230 B3GNT7Q8NFL0 401 aa9.08□□□□□ -0.96
TNFRSF9-204ENST00000615230 TXNDC15Q96J42 360 aa9.08□□□□□ -0.96
TNFRSF9-204ENST00000615230 ZNF778Q96MU6 729 aa9.08□□□□□ -0.96
TNFRSF9-204ENST00000615230 OBP2BQ9NPH6 170 aa9.08□□□□□ -0.96
TNFRSF9-204ENST00000615230 PLEK2Q9NYT0 353 aa9.08□□□□□ -0.96
TNFRSF9-204ENST00000615230 TAS2R1Q9NYW7 299 aa9.08□□□□□ -0.96
TNFRSF9-204ENST00000615230 ZNF175Q9Y473 711 aa9.08□□□□□ -0.96
TNFRSF9-204ENST00000615230 NRXN2Q9P2S2 1712 aa9.08□□□□□ -0.96
TNFRSF9-204ENST00000615230 TMED7-TICAM2A0A0A6YYA0 188 aa9.08□□□□□ -0.96
TNFRSF9-204ENST00000615230 TEX13DA0A0J9YY54 714 aaPredicted RBP9.08□□□□□ -0.96
TNFRSF9-204ENST00000615230 LRRN3E7EW58 273 aa9.08□□□□□ -0.96
TNFRSF9-204ENST00000615230 ACTL6BO94805 426 aa9.08□□□□□ -0.96
TNFRSF9-204ENST00000615230 CD36P16671 472 aa9.08□□□□□ -0.96
TNFRSF9-204ENST00000615230 CR2P20023 1033 aa9.08□□□□□ -0.96
TNFRSF9-204ENST00000615230 NKAPLQ5M9Q1 402 aa9.08□□□□□ -0.96
TNFRSF9-204ENST00000615230 TMEM64Q6YI46 380 aa9.08□□□□□ -0.96
TNFRSF9-204ENST00000615230 RPS27LQ71UM5 84 aaKnown RBP9.08□□□□□ -0.96
TNFRSF9-204ENST00000615230 GRINAQ7Z429 371 aa9.08□□□□□ -0.96
TNFRSF9-204ENST00000615230 FAM217AQ8IXS0 508 aa9.08□□□□□ -0.96
TNFRSF9-204ENST00000615230 NUDT9Q9BW91 350 aa9.08□□□□□ -0.96
TNFRSF9-204ENST00000615230 PLA2G2FQ9BZM2 168 aa9.08□□□□□ -0.96
TNFRSF9-204ENST00000615230 TMED7Q9Y3B3 224 aa9.08□□□□□ -0.96
TNFRSF9-204ENST00000615230 CMAHPQ9Y471 501 aa9.08□□□□□ -0.96
TNFRSF9-204ENST00000615230 SOX14O95416 240 aa9.08□□□□□ -0.96
TNFRSF9-204ENST00000615230 ERV3-1Q14264 604 aa9.08□□□□□ -0.96
TNFRSF9-204ENST00000615230 PLGLAQ15195 96 aa9.08□□□□□ -0.96
TNFRSF9-204ENST00000615230 TSTQ16762 297 aaKnown RBP9.08□□□□□ -0.96
TNFRSF9-204ENST00000615230 ZNF584Q8IVC4 421 aa9.08□□□□□ -0.96
TNFRSF9-204ENST00000615230 TP53I13Q8NBR0 393 aaPredicted RBP9.08□□□□□ -0.96
TNFRSF9-204ENST00000615230 OR9I1Q8NGQ6 314 aa9.08□□□□□ -0.96
TNFRSF9-204ENST00000615230 OIT3Q8WWZ8 545 aa9.08□□□□□ -0.96
TNFRSF9-204ENST00000615230 CPPED1Q9BRF8 314 aaPredicted RBP9.08□□□□□ -0.96
TNFRSF9-204ENST00000615230 METTL8Q9H825 291 aaKnown RBP9.08□□□□□ -0.96
TNFRSF9-204ENST00000615230 PPP1R3DO95685 299 aa9.08□□□□□ -0.96
TNFRSF9-204ENST00000615230 UCHL1P09936 223 aa9.08□□□□□ -0.96
TNFRSF9-204ENST00000615230 SELENBP1Q13228 472 aa9.08□□□□□ -0.96
TNFRSF9-204ENST00000615230 TMEM102Q8N9M5 508 aaPredicted RBP9.08□□□□□ -0.96
TNFRSF9-204ENST00000615230 STEAP2Q8NFT2 490 aa9.08□□□□□ -0.96
TNFRSF9-204ENST00000615230 ZNF417Q8TAU3 575 aa9.08□□□□□ -0.96
TNFRSF9-204ENST00000615230 DPAGT1Q9H3H5 408 aa9.08□□□□□ -0.96
TNFRSF9-204ENST00000615230 SNTG1Q9NSN8 517 aa9.08□□□□□ -0.96
TNFRSF9-204ENST00000615230 MALT1Q9UDY8 824 aa9.08□□□□□ -0.96
TNFRSF9-204ENST00000615230 R4GN57 208 aa9.08□□□□□ -0.96
TNFRSF9-204ENST00000615230 PMF1-BGLAPU3KQ54 211 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms