RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 ZNF626Q68DY1 528 aa3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 GTF2H2CQ6P1K8 395 aa3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 MSANTD2Q6P1R3 559 aa3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 SCIMPQ6UWF3 145 aa3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 CEACAM20Q6UY09 585 aa3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 ZNF813Q6ZN06 617 aa3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 DEF8Q6ZN54 512 aa3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 DNM1P46Q6ZS02 220 aa3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 Q6ZSN1 163 aa3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 PLPPR4Q7Z2D5 763 aa3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 GOLGA7Q7Z5G4 137 aa3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 DENND1CQ8IV53 801 aa3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 GPR135Q8IZ08 494 aa3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 OR4N4Q8N0Y3 316 aa3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 PUSL1Q8N0Z8 303 aaKnown RBP3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 NAGSQ8N159 534 aa3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 TOMM5Q8N4H5 51 aa3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 L3MBTL4Q8NA19 623 aa3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 ZNF527Q8NB42 609 aa3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 C11orf65Q8NCR3 313 aa3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 GPR156Q8NFN8 814 aa3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 MDGA1Q8NFP4 955 aa3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 OR14K1Q8NGZ2 314 aa3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 OR4L1Q8NH43 312 aa3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 COQ8AQ8NI60 647 aa3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 SH3RF2Q8TEC5 729 aa3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 CLEC4CQ8WTT0 213 aa3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 C15orf40Q8WUR7 153 aa3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 FAM151AQ8WW52 585 aa3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 NELL1Q92832 810 aa3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 ELMOD3Q96FG2 381 aa3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 FUBP3Q96I24 572 aaKnown RBP eCLIP3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 C12orf66Q96MD2 445 aa3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 TEFMQ96QE5 360 aaKnown RBP3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 TAAR9Q96RI9 348 aa3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 ABHD1Q96SE0 405 aa3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 PCYT2Q99447 389 aa3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 ELF4Q99607 663 aaPredicted RBP3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 MYOCQ99972 504 aa3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 MRPL45Q9BRJ2 306 aaKnown RBP3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 FUZQ9BT04 418 aa3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 TRIM62Q9BVG3 475 aa3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 TSSK6Q9BXA6 273 aa3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 C1QTNF6Q9BXI9 259 aa3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 FSD1LQ9BXM9 530 aa3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 TKTL2Q9H0I9 626 aa3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 NELFAQ9H3P2 528 aa3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 ZNF768Q9H5H4 540 aaKnown RBP3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 WDCPQ9H6R7 721 aa3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 WDR26Q9H7D7 661 aa3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 UNKLQ9H9P5 680 aaKnown RBP3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 CACYBPQ9HB71 228 aaKnown RBP3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 RDH14Q9HBH5 336 aa3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 GPN1Q9HCN4 374 aaPredicted RBP3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 MYOZ1Q9NP98 299 aaPredicted RBP3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 MIEF1Q9NQG6 463 aa3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 ACSS1Q9NUB1 689 aaPredicted RBP3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 TMEM100Q9NV29 134 aa3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 RLIMQ9NVW2 624 aa3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 NLE1Q9NVX2 485 aaPredicted RBP3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 TAS2R16Q9NYV7 291 aa3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 TAS2R3Q9NYW6 316 aa3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 MARCH4Q9P2E8 410 aaPredicted RBP3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 KLHL42Q9P2K6 505 aa3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 ZNF629Q9UEG4 869 aaPredicted RBP3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 CDC42EP3Q9UKI2 254 aa3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 ADAMTS5Q9UNA0 930 aa3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 EXOGQ9Y2C4 368 aaKnown RBP3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 RPH3AQ9Y2J0 694 aaPredicted RBP3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 DHRS7Q9Y394 339 aa3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 POLR3HQ9Y535 204 aaPredicted RBP3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 NME7Q9Y5B8 376 aa3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 SPIN1Q9Y657 262 aaPredicted RBP3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 ATP23Q9Y6H3 246 aa3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 ZSWIM8A7E2V4 1837 aa3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 NINQ8N4C6 2090 aa3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 CKAP5Q14008 2032 aa3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 CHD5Q8TDI0 1954 aa3.78□□□□□ -1.8
HMGB1P50-201ENST00000605814 GREB1Q4ZG55 1949 aa3.78□□□□□ -1.81
HMGB1P50-201ENST00000605814 NYNRINQ9P2P1 1898 aaKnown RBP3.77□□□□□ -1.81
HMGB1P50-201ENST00000605814 KIAA1671Q9BY89 1806 aa3.77□□□□□ -1.81
HMGB1P50-201ENST00000605814 TRAV1-2A0A0B4J238 106 aa3.77□□□□□ -1.81
HMGB1P50-201ENST00000605814 C1orf226A1L170 272 aa3.77□□□□□ -1.81
HMGB1P50-201ENST00000605814 RNF222A6NCQ9 220 aa3.77□□□□□ -1.81
HMGB1P50-201ENST00000605814 RFPL4AA6NLU0 287 aa3.77□□□□□ -1.81
HMGB1P50-201ENST00000605814 GABRR3A8MPY1 467 aa3.77□□□□□ -1.81
HMGB1P50-201ENST00000605814 MAGEB17A8MXT2 336 aa3.77□□□□□ -1.81
HMGB1P50-201ENST00000605814 C1orf196B1AJZ1 125 aa3.77□□□□□ -1.81
HMGB1P50-201ENST00000605814 DISC1C4P0D8 188 aa3.77□□□□□ -1.81
HMGB1P50-201ENST00000605814 C5orf58C9J3I9 102 aa3.77□□□□□ -1.81
HMGB1P50-201ENST00000605814 C19orf81C9J6K1 198 aa3.77□□□□□ -1.81
HMGB1P50-201ENST00000605814 RFPL4AL1F8VTS6 287 aa3.77□□□□□ -1.81
HMGB1P50-201ENST00000605814 H7C0S8 307 aa3.77□□□□□ -1.81
HMGB1P50-201ENST00000605814 ACOT7O00154 380 aa3.77□□□□□ -1.81
HMGB1P50-201ENST00000605814 FAAHO00519 579 aa3.77□□□□□ -1.81
HMGB1P50-201ENST00000605814 GABRPO00591 440 aa3.77□□□□□ -1.81
HMGB1P50-201ENST00000605814 PIRO00625 290 aa3.77□□□□□ -1.81
HMGB1P50-201ENST00000605814 BCAT2O15382 392 aaPredicted RBP3.77□□□□□ -1.81
HMGB1P50-201ENST00000605814 LRRTM2O43300 516 aa3.77□□□□□ -1.81
HMGB1P50-201ENST00000605814 OR1I1O60431 355 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms