RNA–Protein interactions for RNA: ENST00000604817.2

IGHV3-29-201, Transcript of immunoglobulin heavy variable 3-29 (pseudogene), humanhuman

BASIC

Gene IGHV3-29, Length 344 nt, Biotype IG V pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-29-201ENST00000604817 C10orf25Q5T742 122 aa3.42□□□□□ -1.86
IGHV3-29-201ENST00000604817 PLCXD3Q63HM9 321 aa3.42□□□□□ -1.86
IGHV3-29-201ENST00000604817 PDPK2PQ6A1A2 396 aa3.42□□□□□ -1.86
IGHV3-29-201ENST00000604817 DMKNQ6E0U4 476 aaPredicted RBP3.42□□□□□ -1.86
IGHV3-29-201ENST00000604817 TCEAL6Q6IPX3 200 aa3.42□□□□□ -1.86
IGHV3-29-201ENST00000604817 SLC18B1Q6NT16 456 aa3.42□□□□□ -1.86
IGHV3-29-201ENST00000604817 TRNP1Q6NT89 227 aa3.42□□□□□ -1.86
IGHV3-29-201ENST00000604817 KCNIP4Q6PIL6 250 aa3.42□□□□□ -1.86
IGHV3-29-201ENST00000604817 TMEM107Q6UX40 140 aa3.42□□□□□ -1.86
IGHV3-29-201ENST00000604817 GFRALQ6UXV0 394 aa3.42□□□□□ -1.86
IGHV3-29-201ENST00000604817 KCTD8Q6ZWB6 473 aa3.42□□□□□ -1.86
IGHV3-29-201ENST00000604817 EIF3MQ7L2H7 374 aaKnown RBP3.42□□□□□ -1.86
IGHV3-29-201ENST00000604817 P4HA3Q7Z4N8 544 aa3.42□□□□□ -1.86
IGHV3-29-201ENST00000604817 NET1Q7Z628 596 aaPredicted RBP3.42□□□□□ -1.86
IGHV3-29-201ENST00000604817 SCD5Q86SK9 330 aa3.42□□□□□ -1.86
IGHV3-29-201ENST00000604817 KIAA1328Q86T90 577 aa3.42□□□□□ -1.86
IGHV3-29-201ENST00000604817 TMEM219Q86XT9 240 aa3.42□□□□□ -1.86
IGHV3-29-201ENST00000604817 CNGA4Q8IV77 575 aa3.42□□□□□ -1.86
IGHV3-29-201ENST00000604817 CD302Q8IX05 232 aa3.42□□□□□ -1.86
IGHV3-29-201ENST00000604817 ODF3L1Q8IXM7 274 aa3.42□□□□□ -1.86
IGHV3-29-201ENST00000604817 TEX26Q8N6G2 289 aa3.42□□□□□ -1.86
IGHV3-29-201ENST00000604817 RBMXL3Q8N7X1 1067 aaKnown RBP3.42□□□□□ -1.86
IGHV3-29-201ENST00000604817 POC1AQ8NBT0 407 aa3.42□□□□□ -1.86
IGHV3-29-201ENST00000604817 C7orf57Q8NEG2 295 aa3.42□□□□□ -1.86
IGHV3-29-201ENST00000604817 OR1F12Q8NHA8 337 aa3.42□□□□□ -1.86
IGHV3-29-201ENST00000604817 PRSS3P2Q8NHM4 247 aa3.42□□□□□ -1.86
IGHV3-29-201ENST00000604817 RDH11Q8TC12 318 aa3.42□□□□□ -1.86
IGHV3-29-201ENST00000604817 GPX8Q8TED1 209 aa3.42□□□□□ -1.86
IGHV3-29-201ENST00000604817 LHX4Q969G2 390 aa3.42□□□□□ -1.86
IGHV3-29-201ENST00000604817 ADIPOR1Q96A54 375 aa3.42□□□□□ -1.86
IGHV3-29-201ENST00000604817 SGK3Q96BR1 496 aa3.42□□□□□ -1.86
IGHV3-29-201ENST00000604817 C10orf35Q96D05 121 aa3.42□□□□□ -1.86
IGHV3-29-201ENST00000604817 C7orf34Q96L11 122 aa3.42□□□□□ -1.86
IGHV3-29-201ENST00000604817 C4orf45Q96LM5 186 aa3.42□□□□□ -1.86
IGHV3-29-201ENST00000604817 C3orf30Q96M34 536 aa3.42□□□□□ -1.86
IGHV3-29-201ENST00000604817 TECTBQ96PL2 329 aa3.42□□□□□ -1.86
IGHV3-29-201ENST00000604817 MTMR9Q96QG7 549 aa3.42□□□□□ -1.86
IGHV3-29-201ENST00000604817 CENPKQ9BS16 269 aa3.42□□□□□ -1.86
IGHV3-29-201ENST00000604817 SLC25A33Q9BSK2 321 aa3.42□□□□□ -1.86
IGHV3-29-201ENST00000604817 FUCA2Q9BTY2 467 aa3.42□□□□□ -1.86
IGHV3-29-201ENST00000604817 ST6GALNAC5Q9BVH7 336 aa3.42□□□□□ -1.86
IGHV3-29-201ENST00000604817 NARFLQ9H6Q4 476 aa3.42□□□□□ -1.86
IGHV3-29-201ENST00000604817 AZI2Q9H6S1 392 aa3.42□□□□□ -1.86
IGHV3-29-201ENST00000604817 GPN2Q9H9Y4 310 aaPredicted RBP3.42□□□□□ -1.86
IGHV3-29-201ENST00000604817 SPACA1Q9HBV2 294 aa3.42□□□□□ -1.86
IGHV3-29-201ENST00000604817 FZD3Q9NPG1 666 aa3.42□□□□□ -1.86
IGHV3-29-201ENST00000604817 POLE4Q9NR33 117 aa3.42□□□□□ -1.86
IGHV3-29-201ENST00000604817 MED17Q9NVC6 651 aa3.42□□□□□ -1.86
IGHV3-29-201ENST00000604817 C2orf42Q9NWW7 574 aa3.42□□□□□ -1.86
IGHV3-29-201ENST00000604817 UBAP1Q9NZ09 502 aa3.42□□□□□ -1.86
IGHV3-29-201ENST00000604817 AHSPQ9NZD4 102 aa3.42□□□□□ -1.86
IGHV3-29-201ENST00000604817 POLDIP2Q9Y2S7 368 aa3.42□□□□□ -1.86
IGHV3-29-201ENST00000604817 PPIAL4AQ9Y536 164 aa3.42□□□□□ -1.86
IGHV3-29-201ENST00000604817 EVPLQ92817 2033 aa3.42□□□□□ -1.86
IGHV3-29-201ENST00000604817 MIA3Q5JRA6 1907 aa3.42□□□□□ -1.86
IGHV3-29-201ENST00000604817 MYH15Q9Y2K3 1946 aa3.42□□□□□ -1.86
IGHV3-29-201ENST00000604817 PLIN4Q96Q06 1357 aa3.41□□□□□ -1.86
IGHV3-29-201ENST00000604817 ZZEF1O43149 2961 aa3.41□□□□□ -1.86
IGHV3-29-201ENST00000604817 MTCL1Q9Y4B5 1905 aaKnown RBP3.41□□□□□ -1.86
IGHV3-29-201ENST00000604817 TMEM272A0A1B0GTI8 110 aa3.41□□□□□ -1.86
IGHV3-29-201ENST00000604817 LOC101059948A0A1B0GTJ6 334 aa3.41□□□□□ -1.86
IGHV3-29-201ENST00000604817 OR6C75A6NL08 312 aa3.41□□□□□ -1.86
IGHV3-29-201ENST00000604817 SHISA7A6NL88 538 aa3.41□□□□□ -1.86
IGHV3-29-201ENST00000604817 HIDE1A8MVS5 230 aa3.41□□□□□ -1.86
IGHV3-29-201ENST00000604817 PRR23D1E9PI22 279 aaPredicted RBP3.41□□□□□ -1.86
IGHV3-29-201ENST00000604817 CCSO14618 274 aa3.41□□□□□ -1.86
IGHV3-29-201ENST00000604817 RANBP6O60518 1105 aaKnown RBP3.41□□□□□ -1.86
IGHV3-29-201ENST00000604817 TOXO94900 526 aa3.41□□□□□ -1.86
IGHV3-29-201ENST00000604817 OR2F2O95006 317 aa3.41□□□□□ -1.86
IGHV3-29-201ENST00000604817 NXPH2O95156 264 aa3.41□□□□□ -1.86
IGHV3-29-201ENST00000604817 NDUFB8O95169 186 aa3.41□□□□□ -1.86
IGHV3-29-201ENST00000604817 FGFR1OPO95684 399 aaKnown RBP3.41□□□□□ -1.86
IGHV3-29-201ENST00000604817 CALCAP01258 141 aa3.41□□□□□ -1.86
IGHV3-29-201ENST00000604817 LGALS2P05162 132 aa3.41□□□□□ -1.86
IGHV3-29-201ENST00000604817 FCER2P06734 321 aa3.41□□□□□ -1.86
IGHV3-29-201ENST00000604817 DCNP07585 359 aaKnown RBP3.41□□□□□ -1.86
IGHV3-29-201ENST00000604817 SLC35G4P0C7Q5 338 aa3.41□□□□□ -1.86
IGHV3-29-201ENST00000604817 STAG3L2P0CL84 134 aa3.41□□□□□ -1.86
IGHV3-29-201ENST00000604817 PRR23D2P0DMB1 279 aaPredicted RBP3.41□□□□□ -1.86
IGHV3-29-201ENST00000604817 CCNB1P14635 433 aa3.41□□□□□ -1.86
IGHV3-29-201ENST00000604817 PTNP21246 168 aa3.41□□□□□ -1.86
IGHV3-29-201ENST00000604817 CD52P31358 61 aa3.41□□□□□ -1.86
IGHV3-29-201ENST00000604817 HNRNPH3P31942 346 aaKnown RBP3.41□□□□□ -1.86
IGHV3-29-201ENST00000604817 AMTP48728 403 aa3.41□□□□□ -1.86
IGHV3-29-201ENST00000604817 NDST1P52848 882 aa3.41□□□□□ -1.86
IGHV3-29-201ENST00000604817 NDST2P52849 883 aa3.41□□□□□ -1.86
IGHV3-29-201ENST00000604817 GAS1P54826 345 aa3.41□□□□□ -1.86
IGHV3-29-201ENST00000604817 SLC8A3P57103 927 aa3.41□□□□□ -1.86
IGHV3-29-201ENST00000604817 EWSR1Q01844 656 aaKnown RBP eCLIP3.41□□□□□ -1.86
IGHV3-29-201ENST00000604817 IRF8Q02556 426 aa3.41□□□□□ -1.86
IGHV3-29-201ENST00000604817 SLC20A2Q08357 652 aa3.41□□□□□ -1.86
IGHV3-29-201ENST00000604817 LGALS3BPQ08380 585 aa3.41□□□□□ -1.86
IGHV3-29-201ENST00000604817 MGAT3Q09327 533 aa3.41□□□□□ -1.86
IGHV3-29-201ENST00000604817 ILKQ13418 452 aa3.41□□□□□ -1.86
IGHV3-29-201ENST00000604817 C1orf61Q13536 156 aa3.41□□□□□ -1.86
IGHV3-29-201ENST00000604817 GK3PQ14409 553 aa3.41□□□□□ -1.86
IGHV3-29-201ENST00000604817 MESDQ14696 234 aa3.41□□□□□ -1.86
IGHV3-29-201ENST00000604817 SF3B4Q15427 424 aaKnown RBP eCLIP3.41□□□□□ -1.86
IGHV3-29-201ENST00000604817 ALX1Q15699 326 aa3.41□□□□□ -1.86
IGHV3-29-201ENST00000604817 C3AR1Q16581 482 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms