RNA–Protein interactions for RNA: ENST00000604306.1

NEDD8-MDP1-203, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 681 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-203ENST00000604306 CDK5Q00535 292 aa11.26□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 SNTA1Q13424 505 aa11.26□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 NTRK2Q16620 822 aa11.26□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 CTU2Q2VPK5 515 aaKnown RBP11.26□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 ANKDD1AQ495B1 522 aa11.26□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 TMEM201Q5SNT2 666 aa11.26□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 FAM199XQ6PEV8 388 aaPredicted RBP11.26□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 KIRREL2Q6UWL6 708 aa11.26□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 C5orf46Q6UWT4 87 aa11.26□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 TIPARPQ7Z3E1 657 aaKnown RBP11.26□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 ENTHD1Q8IYW4 607 aa11.26□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 OR11G2Q8NGC1 345 aa11.26□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 RHOXF1Q8NHV9 184 aa11.26□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 TEX47Q8TBZ9 253 aa11.26□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 PHOSPHO1Q8TCT1 267 aa11.26□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 BRIX1Q8TDN6 353 aaKnown RBP11.26□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 TMEM255BQ8WV15 326 aa11.26□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 IPCEF1Q8WWN9 437 aaPredicted RBP11.26□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 MED17Q9NVC6 651 aa11.26□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 IMPAD1Q9NX62 359 aa11.26□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 SCN3BQ9NY72 215 aa11.26□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 FLRT3Q9NZU0 649 aa11.26□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 ICAM5Q9UMF0 924 aa11.26□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 TPRKBQ9Y3C4 175 aa11.26□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 CDH10Q9Y6N8 788 aa11.26□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 PCNX3Q9H6A9 2034 aa11.25□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 NSG1A0A0A6YYJ2 146 aa11.25□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 SMIM31A0A1B0GVY4 71 aa11.25□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 A0A1W2PNU3 283 aaPredicted RBP11.25□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 STMND1H3BQB6 276 aa11.25□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 PRKNO60260 465 aaPredicted RBP11.25□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 SMNDC1O75940 238 aaKnown RBP eCLIP11.25□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 TCN2P20062 427 aa11.25□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 PGCP20142 388 aa11.25□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 EPHA2P29317 976 aa11.25□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 TTKP33981 857 aa11.25□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 SLC1A3P43003 542 aa11.25□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 SLC9A3P48764 834 aa11.25□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 P2RX1P51575 399 aa11.25□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 MAP2K6P52564 334 aa11.25□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 HOXC5Q00444 222 aa11.25□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 C17orf67Q0P5P2 114 aa11.25□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 DNASE1L3Q13609 305 aa11.25□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 CBFBQ13951 182 aa11.25□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 CD226Q15762 336 aa11.25□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 TMEM44Q2T9K0 475 aa11.25□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 BTBD16Q32M84 506 aa11.25□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 C3orf38Q5JPI3 329 aa11.25□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 MEDAGQ5VYS4 303 aa11.25□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 ZNF773Q6PK81 442 aa11.25□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 OPN5Q6U736 354 aa11.25□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 LYPD8Q6UX82 237 aa11.25□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 ZNF620Q6ZNG0 422 aa11.25□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 RAB43Q86YS6 212 aa11.25□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 CCDC71Q8IV32 467 aaPredicted RBP11.25□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 P3H2Q8IVL5 708 aa11.25□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 NRMQ8IXM6 262 aa11.25□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 GALNT15Q8N3T1 639 aa11.25□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 DEFB124Q8NES8 71 aa11.25□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 OR8J1Q8NGP2 316 aa11.25□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 OR5W2Q8NH69 310 aa11.25□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 FAM81AQ8TBF8 368 aa11.25□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 LIPHQ8WWY8 451 aa11.25□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 C3orf49Q96BT1 292 aa11.25□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 C8orf44Q96CB5 159 aa11.25□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 Q96MT0 163 aa11.25□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 POLDIP3Q9BY77 421 aaKnown RBP11.25□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 NRSN2Q9GZP1 204 aa11.25□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 DUSP21Q9H596 190 aa11.25□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 CPNE5Q9HCH3 593 aa11.25□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 CTPS2Q9NRF8 586 aa11.25□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 SDHAF3Q9NRP4 125 aa11.25□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 WDR70Q9NW82 654 aa11.25□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 BAIAP2Q9UQB8 552 aa11.25□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 YARS2Q9Y2Z4 477 aaKnown RBP11.25□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 PCDHGB1Q9Y5G3 927 aa11.25□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 DOCK10Q96BY6 2186 aa11.25□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 ETV2O00321 342 aaPredicted RBP11.24□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 TP53I11O14683 189 aa11.24□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 TM4SF5O14894 197 aa11.24□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 ADAM11O75078 769 aa11.24□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 RCBTB2O95199 551 aa11.24□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 POU2F1P14859 743 aa11.24□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 HTR3AP46098 478 aa11.24□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 GIPRP48546 466 aa11.24□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 ZNF117Q03924 483 aa11.24□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 OCLNQ16625 522 aa11.24□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 MEP1AQ16819 746 aa11.24□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 CCDC157Q569K6 752 aa11.24□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 LAIR2Q6ISS4 152 aa11.24□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 H3F3CQ6NXT2 135 aa11.24□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 JMJD6Q6NYC1 403 aaPredicted RBP11.24□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 SLC27A4Q6P1M0 643 aa11.24□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 BORAQ6PGQ7 559 aa11.24□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 CASP12Q6UXS9 341 aa11.24□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 APOOLQ6UXV4 268 aa11.24□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 WDR88Q6ZMY6 472 aa11.24□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 PRICKLE2Q7Z3G6 844 aa11.24□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 PPP1R32Q7Z5V6 425 aa11.24□□□□□ -0.61
NEDD8-MDP1-203ENST00000604306 ATG4DQ86TL0 474 aaPredicted RBP11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms