RNA–Protein interactions for RNA: ENST00000601065.5

SNRNP70-209, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 3

Gene SNRNP70, Length 1,757 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-209ENST00000601065 CPSF4LA6NMK7 179 aaKnown RBP20.12■□□□□ 0.81
SNRNP70-209ENST00000601065 B4DXG7 233 aa20.12■□□□□ 0.81
SNRNP70-209ENST00000601065 RYKP34925 604 aa20.12■□□□□ 0.81
SNRNP70-209ENST00000601065 CCR4P51679 360 aa20.12■□□□□ 0.81
SNRNP70-209ENST00000601065 TMPRSS3P57727 454 aa20.12■□□□□ 0.81
SNRNP70-209ENST00000601065 OR1C1Q15619 314 aa20.12■□□□□ 0.81
SNRNP70-209ENST00000601065 OR5M10Q6IEU7 315 aa20.12■□□□□ 0.81
SNRNP70-209ENST00000601065 MAGEE2Q8TD90 523 aaPredicted RBP20.12■□□□□ 0.81
SNRNP70-209ENST00000601065 SACM1LQ9NTJ5 587 aa20.12■□□□□ 0.81
SNRNP70-209ENST00000601065 OR5H15A6NDH6 313 aa20.11■□□□□ 0.81
SNRNP70-209ENST00000601065 P04436 131 aa20.11■□□□□ 0.81
SNRNP70-209ENST00000601065 P2RX1P51575 399 aa20.11■□□□□ 0.81
SNRNP70-209ENST00000601065 TAS2R41P59536 307 aa20.11■□□□□ 0.81
SNRNP70-209ENST00000601065 EXOC3L2Q2M3D2 409 aa20.11■□□□□ 0.81
SNRNP70-209ENST00000601065 COLEC12Q5KU26 742 aa20.11■□□□□ 0.81
SNRNP70-209ENST00000601065 IGFL2Q6UWQ7 119 aa20.11■□□□□ 0.81
SNRNP70-209ENST00000601065 OR4C15Q8NGM1 316 aa20.11■□□□□ 0.81
SNRNP70-209ENST00000601065 B4GALNT2Q8NHY0 566 aa20.11■□□□□ 0.81
SNRNP70-209ENST00000601065 HAS2Q92819 552 aa20.11■□□□□ 0.81
SNRNP70-209ENST00000601065 NRBF2Q96F24 287 aa20.11■□□□□ 0.81
SNRNP70-209ENST00000601065 KLHDC3Q9BQ90 382 aa20.11■□□□□ 0.81
SNRNP70-209ENST00000601065 ZNF559Q9BR84 538 aa20.11■□□□□ 0.81
SNRNP70-209ENST00000601065 FNDC11Q9BVV2 318 aa20.11■□□□□ 0.81
SNRNP70-209ENST00000601065 POLR2J2Q9GZM3 115 aaKnown RBP20.11■□□□□ 0.81
SNRNP70-209ENST00000601065 POLR2J3Q9H1A7 115 aaKnown RBP20.11■□□□□ 0.81
SNRNP70-209ENST00000601065 SMURF2Q9HAU4 748 aa20.11■□□□□ 0.81
SNRNP70-209ENST00000601065 TIMMDC1Q9NPL8 285 aa20.11■□□□□ 0.81
SNRNP70-209ENST00000601065 C8orf4Q9NR00 106 aa20.11■□□□□ 0.81
SNRNP70-209ENST00000601065 PDP1Q9P0J1 537 aaPredicted RBP20.11■□□□□ 0.81
SNRNP70-209ENST00000601065 PPP4R1LQ9P1A2 415 aa20.11■□□□□ 0.81
SNRNP70-209ENST00000601065 LRRC42Q9Y546 428 aa20.11■□□□□ 0.81
SNRNP70-209ENST00000601065 IGLV3-32A0A0A0MS00 114 aa20.11■□□□□ 0.81
SNRNP70-209ENST00000601065 C7orf72A4D263 438 aa20.11■□□□□ 0.81
SNRNP70-209ENST00000601065 GMFGO60234 142 aa20.11■□□□□ 0.81
SNRNP70-209ENST00000601065 H1F0P07305 194 aaKnown RBP20.11■□□□□ 0.81
SNRNP70-209ENST00000601065 LINGO3P0C6S8 592 aa20.11■□□□□ 0.81
SNRNP70-209ENST00000601065 HMGA2P52926 109 aa20.11■□□□□ 0.81
SNRNP70-209ENST00000601065 DAG1Q14118 895 aa20.11■□□□□ 0.81
SNRNP70-209ENST00000601065 OR1Q1Q15612 314 aa20.11■□□□□ 0.81
SNRNP70-209ENST00000601065 INPP5JQ15735 1006 aaPredicted RBP20.11■□□□□ 0.81
SNRNP70-209ENST00000601065 COL28A1Q2UY09 1125 aa20.11■□□□□ 0.81
SNRNP70-209ENST00000601065 ANKRD34AQ69YU3 496 aa20.11■□□□□ 0.81
SNRNP70-209ENST00000601065 PLEKHM3Q6ZWE6 761 aa20.11■□□□□ 0.81
SNRNP70-209ENST00000601065 LSMEM1Q8N8F7 131 aa20.11■□□□□ 0.81
SNRNP70-209ENST00000601065 OR5W2Q8NH69 310 aa20.11■□□□□ 0.81
SNRNP70-209ENST00000601065 ZCCHC14Q8WYQ9 949 aaKnown RBP20.11■□□□□ 0.81
SNRNP70-209ENST00000601065 DHRS1Q96LJ7 313 aa20.11■□□□□ 0.81
SNRNP70-209ENST00000601065 HRH3Q9Y5N1 445 aa20.11■□□□□ 0.81
SNRNP70-209ENST00000601065 PCNX3Q9H6A9 2034 aa20.1■□□□□ 0.81
SNRNP70-209ENST00000601065 SLC25A12O75746 678 aa20.1■□□□□ 0.81
SNRNP70-209ENST00000601065 SLC6A8P48029 635 aa20.1■□□□□ 0.81
SNRNP70-209ENST00000601065 LIMS1P48059 325 aa20.1■□□□□ 0.81
SNRNP70-209ENST00000601065 FGD3Q5JSP0 725 aa20.1■□□□□ 0.81
SNRNP70-209ENST00000601065 OFCC1Q8IZS5 231 aa20.1■□□□□ 0.81
SNRNP70-209ENST00000601065 TOR1AIP2Q8NFQ8 470 aa20.1■□□□□ 0.81
SNRNP70-209ENST00000601065 NR4A3Q92570 626 aa20.1■□□□□ 0.81
SNRNP70-209ENST00000601065 ALPK1Q96QP1 1244 aa20.1■□□□□ 0.81
SNRNP70-209ENST00000601065 SMAD5Q99717 465 aaKnown RBP20.1■□□□□ 0.81
SNRNP70-209ENST00000601065 OSBPL10Q9BXB5 764 aa20.1■□□□□ 0.81
SNRNP70-209ENST00000601065 TRIM2Q9C040 744 aa20.1■□□□□ 0.81
SNRNP70-209ENST00000601065 C15orf41Q9Y2V0 281 aa20.1■□□□□ 0.81
SNRNP70-209ENST00000601065 PTPRQQ9UMZ3 2332 aa20.1■□□□□ 0.81
SNRNP70-209ENST00000601065 G3V3Y1 287 aa20.09■□□□□ 0.81
SNRNP70-209ENST00000601065 SNX4O95219 450 aa20.09■□□□□ 0.81
SNRNP70-209ENST00000601065 OR5F1O95221 314 aa20.09■□□□□ 0.81
SNRNP70-209ENST00000601065 THY1P04216 161 aa20.09■□□□□ 0.81
SNRNP70-209ENST00000601065 ALPLP05186 524 aa20.09■□□□□ 0.81
SNRNP70-209ENST00000601065 ALDH3A2P51648 485 aa20.09■□□□□ 0.81
SNRNP70-209ENST00000601065 ARG2P78540 354 aa20.09■□□□□ 0.81
SNRNP70-209ENST00000601065 CBFBQ13951 182 aa20.09■□□□□ 0.81
SNRNP70-209ENST00000601065 WDSUB1Q8N9V3 476 aa20.09■□□□□ 0.81
SNRNP70-209ENST00000601065 MDS2Q8NDY4 140 aa20.09■□□□□ 0.81
SNRNP70-209ENST00000601065 PIK3C3Q8NEB9 887 aa20.09■□□□□ 0.81
SNRNP70-209ENST00000601065 ZNF597Q96LX8 424 aa20.09■□□□□ 0.81
SNRNP70-209ENST00000601065 RBM4BQ9BQ04 359 aaKnown RBP20.09■□□□□ 0.81
SNRNP70-209ENST00000601065 RBM4Q9BWF3 364 aaKnown RBP20.09■□□□□ 0.81
SNRNP70-209ENST00000601065 TMEM27Q9HBJ8 222 aa20.09■□□□□ 0.81
SNRNP70-209ENST00000601065 HHATLQ9HCP6 504 aa20.09■□□□□ 0.81
SNRNP70-209ENST00000601065 MED11Q9P086 117 aa20.09■□□□□ 0.81
SNRNP70-209ENST00000601065 TRBV4-1A0A0J9YWV2 114 aa20.08■□□□□ 0.81
SNRNP70-209ENST00000601065 H0YJX3 145 aa20.08■□□□□ 0.81
SNRNP70-209ENST00000601065 FAAHO00519 579 aa20.08■□□□□ 0.81
SNRNP70-209ENST00000601065 UQCRBP14927 111 aa20.08■□□□□ 0.81
SNRNP70-209ENST00000601065 MSX1P28360 303 aa20.08■□□□□ 0.81
SNRNP70-209ENST00000601065 IFNA8P32881 189 aa20.08■□□□□ 0.81
SNRNP70-209ENST00000601065 IDH2P48735 452 aaKnown RBP20.08■□□□□ 0.81
SNRNP70-209ENST00000601065 SUMO3P55854 103 aaPredicted RBP20.08■□□□□ 0.81
SNRNP70-209ENST00000601065 SMIM11AP58511 58 aa20.08■□□□□ 0.81
SNRNP70-209ENST00000601065 COPZ1P61923 177 aa20.08■□□□□ 0.81
SNRNP70-209ENST00000601065 PPP2R2BQ00005 443 aa20.08■□□□□ 0.81
SNRNP70-209ENST00000601065 MICAQ29983 383 aa20.08■□□□□ 0.81
SNRNP70-209ENST00000601065 ZNF613Q6PF04 617 aa20.08■□□□□ 0.81
SNRNP70-209ENST00000601065 BORAQ6PGQ7 559 aa20.08■□□□□ 0.81
SNRNP70-209ENST00000601065 GIPC3Q8TF64 312 aa20.08■□□□□ 0.81
SNRNP70-209ENST00000601065 ZNF524Q96C55 264 aa20.08■□□□□ 0.81
SNRNP70-209ENST00000601065 GABARAPL1Q9H0R8 117 aa20.08■□□□□ 0.81
SNRNP70-209ENST00000601065 MAN2C1Q9NTJ4 1040 aa20.08■□□□□ 0.81
SNRNP70-209ENST00000601065 DEPPQ9NTK1 212 aa20.08■□□□□ 0.81
SNRNP70-209ENST00000601065 A0A0B4J2E0 115 aa20.08■□□□□ 0.8
SNRNP70-209ENST00000601065 A0A0G2JMM0 328 aa20.08■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms