RNA–Protein interactions for RNA: ENST00000600383.1

HIF3A-218, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,101 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-218ENST00000600383 TSC22D3Q99576 134 aa13.91□□□□□ -0.18
HIF3A-218ENST00000600383 TBL1XR1Q9BZK7 514 aa13.91□□□□□ -0.18
HIF3A-218ENST00000600383 TMEM9BQ9NQ34 198 aa13.91□□□□□ -0.18
HIF3A-218ENST00000600383 IL20Q9NYY1 176 aa13.91□□□□□ -0.18
HIF3A-218ENST00000600383 GPR52Q9Y2T5 361 aa13.91□□□□□ -0.18
HIF3A-218ENST00000600383 PTRH2Q9Y3E5 179 aaKnown RBP13.91□□□□□ -0.18
HIF3A-218ENST00000600383 LOXL2Q9Y4K0 774 aa13.91□□□□□ -0.18
HIF3A-218ENST00000600383 UNC119BA6NIH7 251 aa13.91□□□□□ -0.18
HIF3A-218ENST00000600383 C4orf47A7E2U8 309 aa13.91□□□□□ -0.18
HIF3A-218ENST00000600383 TO15178 435 aa13.91□□□□□ -0.18
HIF3A-218ENST00000600383 KLF4O43474 513 aa13.91□□□□□ -0.18
HIF3A-218ENST00000600383 HCRTR2O43614 444 aa13.91□□□□□ -0.18
HIF3A-218ENST00000600383 TSPAN2O60636 221 aa13.91□□□□□ -0.18
HIF3A-218ENST00000600383 PAX7P23759 505 aa13.91□□□□□ -0.18
HIF3A-218ENST00000600383 CCKBRP32239 447 aa13.91□□□□□ -0.18
HIF3A-218ENST00000600383 ETV5P41161 510 aa13.91□□□□□ -0.18
HIF3A-218ENST00000600383 SNRPGP62308 76 aaKnown RBP13.91□□□□□ -0.18
HIF3A-218ENST00000600383 DCAF12Q5T6F0 453 aa13.91□□□□□ -0.18
HIF3A-218ENST00000600383 SLC35B4Q969S0 331 aa13.91□□□□□ -0.18
HIF3A-218ENST00000600383 SAMD8Q96LT4 415 aa13.91□□□□□ -0.18
HIF3A-218ENST00000600383 HS6ST2Q96MM7 605 aa13.91□□□□□ -0.18
HIF3A-218ENST00000600383 Q96MT0 163 aa13.91□□□□□ -0.18
HIF3A-218ENST00000600383 DEPDC7Q96QD5 511 aa13.91□□□□□ -0.18
HIF3A-218ENST00000600383 WDR77Q9BQA1 342 aaPredicted RBP13.91□□□□□ -0.18
HIF3A-218ENST00000600383 TUBA1CQ9BQE3 449 aa13.91□□□□□ -0.18
HIF3A-218ENST00000600383 NAA50Q9GZZ1 169 aaKnown RBP13.91□□□□□ -0.18
HIF3A-218ENST00000600383 C19orf25Q9UFG5 118 aaPredicted RBP13.91□□□□□ -0.18
HIF3A-218ENST00000600383 PMS2P1A4D2B8 440 aa13.9□□□□□ -0.18
HIF3A-218ENST00000600383 SH3D21A4FU49 640 aa13.9□□□□□ -0.18
HIF3A-218ENST00000600383 ZNF99A8MXY4 864 aaPredicted RBP13.9□□□□□ -0.18
HIF3A-218ENST00000600383 C9J4A7 227 aa13.9□□□□□ -0.18
HIF3A-218ENST00000600383 NDUFB5O43674 189 aa13.9□□□□□ -0.18
HIF3A-218ENST00000600383 ITPKBP27987 946 aa13.9□□□□□ -0.18
HIF3A-218ENST00000600383 TTKP33981 857 aa13.9□□□□□ -0.18
HIF3A-218ENST00000600383 ADH7P40394 386 aa13.9□□□□□ -0.18
HIF3A-218ENST00000600383 PNLIPRP2P54317 469 aa13.9□□□□□ -0.18
HIF3A-218ENST00000600383 CRYZQ08257 329 aaKnown RBP13.9□□□□□ -0.18
HIF3A-218ENST00000600383 FNDC7Q5VTL7 733 aa13.9□□□□□ -0.18
HIF3A-218ENST00000600383 ZNF620Q6ZNG0 422 aa13.9□□□□□ -0.18
HIF3A-218ENST00000600383 RAB11FIP2Q7L804 512 aa13.9□□□□□ -0.18
HIF3A-218ENST00000600383 SLCO6A1Q86UG4 719 aa13.9□□□□□ -0.18
HIF3A-218ENST00000600383 CACTIN-AS1Q8N1I8 211 aa13.9□□□□□ -0.18
HIF3A-218ENST00000600383 ZNF441Q8N8Z8 693 aa13.9□□□□□ -0.18
HIF3A-218ENST00000600383 OR13F1Q8NGS4 319 aa13.9□□□□□ -0.18
HIF3A-218ENST00000600383 OR51A7Q8NH64 312 aa13.9□□□□□ -0.18
HIF3A-218ENST00000600383 ZNF563Q8TA94 476 aa13.9□□□□□ -0.18
HIF3A-218ENST00000600383 FAR1Q8WVX9 515 aa13.9□□□□□ -0.18
HIF3A-218ENST00000600383 VMP1Q96GC9 406 aa13.9□□□□□ -0.18
HIF3A-218ENST00000600383 MPP4Q96JB8 637 aa13.9□□□□□ -0.18
HIF3A-218ENST00000600383 LRR1Q96L50 414 aa13.9□□□□□ -0.18
HIF3A-218ENST00000600383 SEMA4CQ9C0C4 833 aa13.9□□□□□ -0.18
HIF3A-218ENST00000600383 STRADBQ9C0K7 418 aa13.9□□□□□ -0.18
HIF3A-218ENST00000600383 NPFFR2Q9Y5X5 522 aa13.9□□□□□ -0.18
HIF3A-218ENST00000600383 SCO2O43819 266 aa13.9□□□□□ -0.18
HIF3A-218ENST00000600383 NUDT14O95848 222 aa13.9□□□□□ -0.18
HIF3A-218ENST00000600383 NGFRP08138 427 aa13.9□□□□□ -0.18
HIF3A-218ENST00000600383 MASP1P48740 699 aa13.9□□□□□ -0.18
HIF3A-218ENST00000600383 SKP2Q13309 424 aa13.9□□□□□ -0.18
HIF3A-218ENST00000600383 GTF2IRD2BQ6EKJ0 949 aa13.9□□□□□ -0.18
HIF3A-218ENST00000600383 TMEM205Q6UW68 189 aa13.9□□□□□ -0.18
HIF3A-218ENST00000600383 GTF2IRD2Q86UP8 949 aa13.9□□□□□ -0.18
HIF3A-218ENST00000600383 ZNF440Q8IYI8 595 aa13.9□□□□□ -0.18
HIF3A-218ENST00000600383 SVOPQ8N4V2 548 aa13.9□□□□□ -0.18
HIF3A-218ENST00000600383 ISOC1Q96CN7 298 aa13.9□□□□□ -0.18
HIF3A-218ENST00000600383 SLC38A2Q96QD8 506 aa13.9□□□□□ -0.18
HIF3A-218ENST00000600383 POLDIP3Q9BY77 421 aaKnown RBP13.9□□□□□ -0.18
HIF3A-218ENST00000600383 ENKD1Q9H0I2 346 aa13.9□□□□□ -0.18
HIF3A-218ENST00000600383 OR52D1Q9H346 318 aa13.9□□□□□ -0.18
HIF3A-218ENST00000600383 WDR54Q9H977 334 aa13.9□□□□□ -0.18
HIF3A-218ENST00000600383 PISDQ9UG56 409 aa13.9□□□□□ -0.18
HIF3A-218ENST00000600383 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.9□□□□□ -0.18
HIF3A-218ENST00000600383 KNTC1P50748 2209 aa13.89□□□□□ -0.19
HIF3A-218ENST00000600383 TRAV27A0A087WT01 109 aa13.89□□□□□ -0.19
HIF3A-218ENST00000600383 EFCAB9A8MZ26 197 aa13.89□□□□□ -0.19
HIF3A-218ENST00000600383 ZNF354AO60765 605 aaPredicted RBP13.89□□□□□ -0.19
HIF3A-218ENST00000600383 CBFA2T3O75081 653 aa13.89□□□□□ -0.19
HIF3A-218ENST00000600383 SEC14L2O76054 403 aa13.89□□□□□ -0.19
HIF3A-218ENST00000600383 CDK1P06493 297 aa13.89□□□□□ -0.19
HIF3A-218ENST00000600383 BMP7P18075 431 aa13.89□□□□□ -0.19
HIF3A-218ENST00000600383 PSMB9P28065 219 aa13.89□□□□□ -0.19
HIF3A-218ENST00000600383 INSM1Q01101 510 aaPredicted RBP13.89□□□□□ -0.19
HIF3A-218ENST00000600383 TEKQ02763 1124 aa13.89□□□□□ -0.19
HIF3A-218ENST00000600383 SMARCD3Q6STE5 483 aa13.89□□□□□ -0.19
HIF3A-218ENST00000600383 SUMF1Q8NBK3 374 aa13.89□□□□□ -0.19
HIF3A-218ENST00000600383 C17orf47Q8NEP4 570 aa13.89□□□□□ -0.19
HIF3A-218ENST00000600383 OR13C2Q8NGS9 318 aa13.89□□□□□ -0.19
HIF3A-218ENST00000600383 OR4Q3Q8NH05 313 aa13.89□□□□□ -0.19
HIF3A-218ENST00000600383 DNAJA4Q8WW22 397 aaPredicted RBP13.89□□□□□ -0.19
HIF3A-218ENST00000600383 MUL1Q969V5 352 aa13.89□□□□□ -0.19
HIF3A-218ENST00000600383 KLHDC3Q9BQ90 382 aa13.89□□□□□ -0.19
HIF3A-218ENST00000600383 TEX12Q9BXU0 123 aa13.89□□□□□ -0.19
HIF3A-218ENST00000600383 SLC25A19Q9HC21 320 aa13.89□□□□□ -0.19
HIF3A-218ENST00000600383 ACOT13Q9NPJ3 140 aa13.89□□□□□ -0.19
HIF3A-218ENST00000600383 NXT1Q9UKK6 140 aaKnown RBP13.89□□□□□ -0.19
HIF3A-218ENST00000600383 PCDHGB1Q9Y5G3 927 aa13.89□□□□□ -0.19
HIF3A-218ENST00000600383 CDH10Q9Y6N8 788 aa13.89□□□□□ -0.19
HIF3A-218ENST00000600383 EP300Q09472 2414 aaPredicted RBP13.89□□□□□ -0.19
HIF3A-218ENST00000600383 B4E171 279 aa13.88□□□□□ -0.19
HIF3A-218ENST00000600383 LCKP06239 509 aa13.88□□□□□ -0.19
HIF3A-218ENST00000600383 JMJD7P0C870 316 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms