RNA–Protein interactions for RNA: ENST00000600310.5

UPF1-209, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 750 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-209ENST00000600310 PINK1Q9BXM7 581 aa17.5■□□□□ 0.39
UPF1-209ENST00000600310 ADA2Q9NZK5 511 aa17.5■□□□□ 0.39
UPF1-209ENST00000600310 PRDM4Q9UKN5 801 aa17.5■□□□□ 0.39
UPF1-209ENST00000600310 ACAD8Q9UKU7 415 aa17.5■□□□□ 0.39
UPF1-209ENST00000600310 ZNF407Q9C0G0 2248 aa17.49■□□□□ 0.39
UPF1-209ENST00000600310 FAAHO00519 579 aa17.49■□□□□ 0.39
UPF1-209ENST00000600310 TPST1O60507 370 aa17.49■□□□□ 0.39
UPF1-209ENST00000600310 UBOX5O94941 541 aa17.49■□□□□ 0.39
UPF1-209ENST00000600310 WISP1O95388 367 aa17.49■□□□□ 0.39
UPF1-209ENST00000600310 NTN1O95631 604 aa17.49■□□□□ 0.39
UPF1-209ENST00000600310 EPPINO95925 133 aa17.49■□□□□ 0.39
UPF1-209ENST00000600310 TPOP07202 933 aa17.49■□□□□ 0.39
UPF1-209ENST00000600310 PRKCAP17252 672 aa17.49■□□□□ 0.39
UPF1-209ENST00000600310 RYKP34925 604 aa17.49■□□□□ 0.39
UPF1-209ENST00000600310 CA7P43166 264 aa17.49■□□□□ 0.39
UPF1-209ENST00000600310 DLX5P56178 289 aa17.49■□□□□ 0.39
UPF1-209ENST00000600310 EPS8Q12929 822 aa17.49■□□□□ 0.39
UPF1-209ENST00000600310 FOXF1Q12946 379 aa17.49■□□□□ 0.39
UPF1-209ENST00000600310 C3AR1Q16581 482 aa17.49■□□□□ 0.39
UPF1-209ENST00000600310 DCST1Q5T197 706 aa17.49■□□□□ 0.39
UPF1-209ENST00000600310 ENPP6Q6UWR7 440 aa17.49■□□□□ 0.39
UPF1-209ENST00000600310 DOLPP1Q86YN1 238 aa17.49■□□□□ 0.39
UPF1-209ENST00000600310 DEFB107AQ8IZN7 70 aa17.49■□□□□ 0.39
UPF1-209ENST00000600310 PRR7Q8TB68 274 aa17.49■□□□□ 0.39
UPF1-209ENST00000600310 TMEM234Q8WY98 164 aa17.49■□□□□ 0.39
UPF1-209ENST00000600310 ST8SIA1Q92185 356 aa17.49■□□□□ 0.39
UPF1-209ENST00000600310 TAMM41Q96BW9 452 aa17.49■□□□□ 0.39
UPF1-209ENST00000600310 MRGPRX4Q96LA9 322 aa17.49■□□□□ 0.39
UPF1-209ENST00000600310 NPAS1Q99742 590 aa17.49■□□□□ 0.39
UPF1-209ENST00000600310 KCTD14Q9BQ13 255 aaPredicted RBP17.49■□□□□ 0.39
UPF1-209ENST00000600310 ACER3Q9NUN7 267 aa17.49■□□□□ 0.39
UPF1-209ENST00000600310 PCNX3Q9H6A9 2034 aa17.48■□□□□ 0.39
UPF1-209ENST00000600310 POLEQ07864 2286 aa17.48■□□□□ 0.39
UPF1-209ENST00000600310 SHISA8B8ZZ34 492 aa17.48■□□□□ 0.39
UPF1-209ENST00000600310 AP3D1O14617 1153 aa17.48■□□□□ 0.39
UPF1-209ENST00000600310 OPN1SWP03999 348 aa17.48■□□□□ 0.39
UPF1-209ENST00000600310 GKN3PP0CG01 181 aa17.48■□□□□ 0.39
UPF1-209ENST00000600310 CPN1P15169 458 aa17.48■□□□□ 0.39
UPF1-209ENST00000600310 KDELR2P33947 212 aa17.48■□□□□ 0.39
UPF1-209ENST00000600310 ACAA2P42765 397 aaKnown RBP17.48■□□□□ 0.39
UPF1-209ENST00000600310 STARP49675 285 aa17.48■□□□□ 0.39
UPF1-209ENST00000600310 LHX2P50458 406 aa17.48■□□□□ 0.39
UPF1-209ENST00000600310 CRYBA2P53672 197 aa17.48■□□□□ 0.39
UPF1-209ENST00000600310 CASP6P55212 293 aa17.48■□□□□ 0.39
UPF1-209ENST00000600310 SESN3P58005 492 aa17.48■□□□□ 0.39
UPF1-209ENST00000600310 BCL2A1Q16548 175 aa17.48■□□□□ 0.39
UPF1-209ENST00000600310 DUSP7Q16829 419 aa17.48■□□□□ 0.39
UPF1-209ENST00000600310 GLIPR1L2Q4G1C9 344 aa17.48■□□□□ 0.39
UPF1-209ENST00000600310 EMC4Q5J8M3 183 aa17.48■□□□□ 0.39
UPF1-209ENST00000600310 SAMD4BQ5PRF9 694 aaKnown RBP17.48■□□□□ 0.39
UPF1-209ENST00000600310 RINLQ6ZS11 566 aa17.48■□□□□ 0.39
UPF1-209ENST00000600310 CD163Q86VB7 1156 aa17.48■□□□□ 0.39
UPF1-209ENST00000600310 COMTD1Q86VU5 262 aa17.48■□□□□ 0.39
UPF1-209ENST00000600310 SMYD1Q8NB12 490 aa17.48■□□□□ 0.39
UPF1-209ENST00000600310 TNIP2Q8NFZ5 429 aa17.48■□□□□ 0.39
UPF1-209ENST00000600310 ZNF563Q8TA94 476 aa17.48■□□□□ 0.39
UPF1-209ENST00000600310 WDYHV1Q96HA8 205 aa17.48■□□□□ 0.39
UPF1-209ENST00000600310 RNF145Q96MT1 663 aa17.48■□□□□ 0.39
UPF1-209ENST00000600310 CDRT15Q96T59 188 aa17.48■□□□□ 0.39
UPF1-209ENST00000600310 PRDM14Q9GZV8 571 aa17.48■□□□□ 0.39
UPF1-209ENST00000600310 PNPLA3Q9NST1 481 aa17.48■□□□□ 0.39
UPF1-209ENST00000600310 TINAGQ9UJW2 476 aa17.48■□□□□ 0.39
UPF1-209ENST00000600310 ZNF337Q9Y3M9 751 aa17.48■□□□□ 0.39
UPF1-209ENST00000600310 AP4B1Q9Y6B7 739 aa17.48■□□□□ 0.39
UPF1-209ENST00000600310 NBASA2RRP1 2371 aa17.48■□□□□ 0.39
UPF1-209ENST00000600310 ZGRF1Q86YA3 2104 aa17.48■□□□□ 0.39
UPF1-209ENST00000600310 DNAJC13O75165 2243 aa17.47■□□□□ 0.39
UPF1-209ENST00000600310 TRGV8A0A0C4DH27 118 aa17.47■□□□□ 0.39
UPF1-209ENST00000600310 SYT5O00445 386 aa17.47■□□□□ 0.39
UPF1-209ENST00000600310 IFNA14P01570 189 aa17.47■□□□□ 0.39
UPF1-209ENST00000600310 C8BP07358 591 aa17.47■□□□□ 0.39
UPF1-209ENST00000600310 PEPDP12955 493 aa17.47■□□□□ 0.39
UPF1-209ENST00000600310 UQCRBP14927 111 aa17.47■□□□□ 0.39
UPF1-209ENST00000600310 ZNF708P17019 499 aa17.47■□□□□ 0.39
UPF1-209ENST00000600310 HTR1EP28566 365 aa17.47■□□□□ 0.39
UPF1-209ENST00000600310 KCNJ5P48544 419 aa17.47■□□□□ 0.39
UPF1-209ENST00000600310 IDH2P48735 452 aaKnown RBP17.47■□□□□ 0.39
UPF1-209ENST00000600310 SPATS1Q496A3 300 aa17.47■□□□□ 0.39
UPF1-209ENST00000600310 PM20D2Q8IYS1 436 aa17.47■□□□□ 0.39
UPF1-209ENST00000600310 GPR32P1Q8NGA4 272 aa17.47■□□□□ 0.39
UPF1-209ENST00000600310 OR5M9Q8NGP3 310 aa17.47■□□□□ 0.39
UPF1-209ENST00000600310 SLC26A7Q8TE54 656 aa17.47■□□□□ 0.39
UPF1-209ENST00000600310 RASSF5Q8WWW0 418 aa17.47■□□□□ 0.39
UPF1-209ENST00000600310 RELTQ969Z4 430 aa17.47■□□□□ 0.39
UPF1-209ENST00000600310 C1orf21Q9H246 121 aa17.47■□□□□ 0.39
UPF1-209ENST00000600310 EVA1AQ9H8M9 152 aa17.47■□□□□ 0.39
UPF1-209ENST00000600310 KLHL28Q9NXS3 571 aa17.47■□□□□ 0.39
UPF1-209ENST00000600310 CD300AQ9UGN4 299 aa17.47■□□□□ 0.39
UPF1-209ENST00000600310 SLC13A4Q9UKG4 626 aa17.47■□□□□ 0.39
UPF1-209ENST00000600310 FREM3P0C091 2139 aa17.47■□□□□ 0.39
UPF1-209ENST00000600310 SPENQ96T58 3664 aaKnown RBP17.46■□□□□ 0.39
UPF1-209ENST00000600310 A0A1B0GUH1 482 aa17.46■□□□□ 0.39
UPF1-209ENST00000600310 AHRRA9YTQ3 701 aa17.46■□□□□ 0.39
UPF1-209ENST00000600310 CXCR6O00574 342 aa17.46■□□□□ 0.39
UPF1-209ENST00000600310 LGI1O95970 557 aa17.46■□□□□ 0.39
UPF1-209ENST00000600310 GP1BBP13224 206 aa17.46■□□□□ 0.39
UPF1-209ENST00000600310 PRG2P13727 222 aa17.46■□□□□ 0.39
UPF1-209ENST00000600310 HSD17B1P14061 328 aa17.46■□□□□ 0.39
UPF1-209ENST00000600310 POU3F2P20265 443 aaPredicted RBP17.46■□□□□ 0.39
UPF1-209ENST00000600310 CD247P20963 164 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms