RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 TOMM34Q15785 309 aaPredicted RBP14.11□□□□□ -0.15
VRK3-221ENST00000600284 TMEM176BQ3YBM2 270 aaPredicted RBP14.11□□□□□ -0.15
VRK3-221ENST00000600284 PDZK1Q5T2W1 519 aa14.11□□□□□ -0.15
VRK3-221ENST00000600284 SHEQ5VZ18 495 aa14.11□□□□□ -0.15
VRK3-221ENST00000600284 OGFOD2Q6N063 350 aa14.11□□□□□ -0.15
VRK3-221ENST00000600284 ZNF550Q7Z398 422 aa14.11□□□□□ -0.15
VRK3-221ENST00000600284 SLC43A2Q8N370 569 aa14.11□□□□□ -0.15
VRK3-221ENST00000600284 ZFP90Q8TF47 636 aa14.11□□□□□ -0.15
VRK3-221ENST00000600284 TACO1Q9BSH4 297 aaKnown RBP14.11□□□□□ -0.15
VRK3-221ENST00000600284 HDHD5Q9BXW7 423 aa14.11□□□□□ -0.15
VRK3-221ENST00000600284 NUF2Q9BZD4 464 aa14.11□□□□□ -0.15
VRK3-221ENST00000600284 OR51I1Q9H343 314 aa14.11□□□□□ -0.15
VRK3-221ENST00000600284 DLL4Q9NR61 685 aa14.11□□□□□ -0.15
VRK3-221ENST00000600284 UGT2B17O75795 530 aa14.1□□□□□ -0.15
VRK3-221ENST00000600284 PRKD3O94806 890 aa14.1□□□□□ -0.15
VRK3-221ENST00000600284 PSMB1P20618 241 aaKnown RBP14.1□□□□□ -0.15
VRK3-221ENST00000600284 SHC1P29353 583 aa14.1□□□□□ -0.15
VRK3-221ENST00000600284 RAC3P60763 192 aa14.1□□□□□ -0.15
VRK3-221ENST00000600284 TXNL4AP83876 142 aaKnown RBP14.1□□□□□ -0.15
VRK3-221ENST00000600284 SKP2Q13309 424 aa14.1□□□□□ -0.15
VRK3-221ENST00000600284 QPRTQ15274 297 aa14.1□□□□□ -0.15
VRK3-221ENST00000600284 ACKR1Q16570 336 aa14.1□□□□□ -0.15
VRK3-221ENST00000600284 BEX5Q5H9J7 111 aa14.1□□□□□ -0.15
VRK3-221ENST00000600284 TMEM201Q5SNT2 666 aa14.1□□□□□ -0.15
VRK3-221ENST00000600284 ATAD3BQ5T9A4 648 aa14.1□□□□□ -0.15
VRK3-221ENST00000600284 SAXO2Q658L1 398 aa14.1□□□□□ -0.15
VRK3-221ENST00000600284 C22orf34Q6ZV56 151 aa14.1□□□□□ -0.15
VRK3-221ENST00000600284 EIF3MQ7L2H7 374 aaKnown RBP14.1□□□□□ -0.15
VRK3-221ENST00000600284 FCRLAQ7L513 359 aa14.1□□□□□ -0.15
VRK3-221ENST00000600284 C16orf62Q7Z3J2 963 aa14.1□□□□□ -0.15
VRK3-221ENST00000600284 CXorf67Q86X51 503 aaPredicted RBP14.1□□□□□ -0.15
VRK3-221ENST00000600284 LRRC75A-AS1Q8N1F1 130 aa14.1□□□□□ -0.15
VRK3-221ENST00000600284 TMEM234Q8WY98 164 aa14.1□□□□□ -0.15
VRK3-221ENST00000600284 ROBO4Q8WZ75 1007 aa14.1□□□□□ -0.15
VRK3-221ENST00000600284 ST8SIA1Q92185 356 aa14.1□□□□□ -0.15
VRK3-221ENST00000600284 NEURL3Q96EH8 262 aa14.1□□□□□ -0.15
VRK3-221ENST00000600284 ZC3HAV1LQ96H79 300 aaKnown RBP14.1□□□□□ -0.15
VRK3-221ENST00000600284 SRXN1Q9BYN0 137 aa14.1□□□□□ -0.15
VRK3-221ENST00000600284 SAP130Q9H0E3 1048 aa14.1□□□□□ -0.15
VRK3-221ENST00000600284 KLHL13Q9P2N7 655 aa14.1□□□□□ -0.15
VRK3-221ENST00000600284 BTNL2Q9UIR0 455 aa14.1□□□□□ -0.15
VRK3-221ENST00000600284 KCNE5Q9UJ90 142 aa14.1□□□□□ -0.15
VRK3-221ENST00000600284 MKLN1Q9UL63 735 aa14.1□□□□□ -0.15
VRK3-221ENST00000600284 MTORP42345 2549 aa14.1□□□□□ -0.15
VRK3-221ENST00000600284 VPS13CQ709C8 3753 aa14.1□□□□□ -0.15
VRK3-221ENST00000600284 E9PBE3 544 aa14.09□□□□□ -0.15
VRK3-221ENST00000600284 ARHGEF9O43307 516 aa14.09□□□□□ -0.15
VRK3-221ENST00000600284 CPSF4O95639 269 aaKnown RBP14.09□□□□□ -0.15
VRK3-221ENST00000600284 CSTAP01040 98 aa14.09□□□□□ -0.15
VRK3-221ENST00000600284 THBDP07204 575 aa14.09□□□□□ -0.15
VRK3-221ENST00000600284 YES1P07947 543 aa14.09□□□□□ -0.15
VRK3-221ENST00000600284 OR12D1P0DN82 309 aa14.09□□□□□ -0.15
VRK3-221ENST00000600284 PGCP20142 388 aa14.09□□□□□ -0.15
VRK3-221ENST00000600284 LOXP28300 417 aaPredicted RBP14.09□□□□□ -0.15
VRK3-221ENST00000600284 SLC7A1P30825 629 aa14.09□□□□□ -0.15
VRK3-221ENST00000600284 RNF144AP50876 292 aaPredicted RBP14.09□□□□□ -0.15
VRK3-221ENST00000600284 SLC18A1P54219 525 aa14.09□□□□□ -0.15
VRK3-221ENST00000600284 NR1H2P55055 460 aa14.09□□□□□ -0.15
VRK3-221ENST00000600284 NKX6-1P78426 367 aaPredicted RBP14.09□□□□□ -0.15
VRK3-221ENST00000600284 LRRC74AQ0VAA2 488 aa14.09□□□□□ -0.15
VRK3-221ENST00000600284 BST1Q10588 318 aa14.09□□□□□ -0.15
VRK3-221ENST00000600284 NDUFAF6Q330K2 333 aa14.09□□□□□ -0.15
VRK3-221ENST00000600284 HHATQ5VTY9 493 aa14.09□□□□□ -0.15
VRK3-221ENST00000600284 ANKRD34AQ69YU3 496 aa14.09□□□□□ -0.15
VRK3-221ENST00000600284 C3orf33Q6P1S2 294 aa14.09□□□□□ -0.15
VRK3-221ENST00000600284 C20orf204Q6ZNR8 217 aa14.09□□□□□ -0.15
VRK3-221ENST00000600284 SPATA19Q7Z5L4 167 aa14.09□□□□□ -0.15
VRK3-221ENST00000600284 ANKRD46Q86W74 232 aa14.09□□□□□ -0.15
VRK3-221ENST00000600284 CLEC4FQ8N1N0 589 aa14.09□□□□□ -0.15
VRK3-221ENST00000600284 TMCO5AQ8N6Q1 288 aa14.09□□□□□ -0.15
VRK3-221ENST00000600284 RFWD2Q8NHY2 731 aa14.09□□□□□ -0.15
VRK3-221ENST00000600284 ABHD3Q8WU67 409 aa14.09□□□□□ -0.15
VRK3-221ENST00000600284 XAGE5Q8WWM1 108 aa14.09□□□□□ -0.15
VRK3-221ENST00000600284 CCDC115Q96NT0 180 aa14.09□□□□□ -0.15
VRK3-221ENST00000600284 PAIP2Q9BPZ3 127 aaKnown RBP14.09□□□□□ -0.15
VRK3-221ENST00000600284 THUMPD3Q9BV44 507 aaKnown RBP14.09□□□□□ -0.15
VRK3-221ENST00000600284 COQ10BQ9H8M1 238 aa14.09□□□□□ -0.15
VRK3-221ENST00000600284 SERINC1Q9NRX5 453 aa14.09□□□□□ -0.15
VRK3-221ENST00000600284 PNPOQ9NVS9 261 aa14.09□□□□□ -0.15
VRK3-221ENST00000600284 THAP1Q9NVV9 213 aa14.09□□□□□ -0.15
VRK3-221ENST00000600284 SLC35A3Q9Y2D2 325 aa14.09□□□□□ -0.15
VRK3-221ENST00000600284 MAP1AP78559 2803 aaPredicted RBP14.09□□□□□ -0.15
VRK3-221ENST00000600284 KLF4O43474 513 aa14.08□□□□□ -0.16
VRK3-221ENST00000600284 KIAA0513O60268 411 aa14.08□□□□□ -0.16
VRK3-221ENST00000600284 S100A3P33764 101 aa14.08□□□□□ -0.16
VRK3-221ENST00000600284 CCR4P51679 360 aa14.08□□□□□ -0.16
VRK3-221ENST00000600284 FAM174BQ3ZCQ3 159 aa14.08□□□□□ -0.16
VRK3-221ENST00000600284 TIGD2Q4W5G0 525 aa14.08□□□□□ -0.16
VRK3-221ENST00000600284 SPANXN4Q5MJ08 99 aa14.08□□□□□ -0.16
VRK3-221ENST00000600284 TUSC5Q8IXB3 177 aa14.08□□□□□ -0.16
VRK3-221ENST00000600284 TRIML2Q8N7C3 387 aa14.08□□□□□ -0.16
VRK3-221ENST00000600284 WFDC11Q8NEX6 87 aa14.08□□□□□ -0.16
VRK3-221ENST00000600284 STEAP2Q8NFT2 490 aa14.08□□□□□ -0.16
VRK3-221ENST00000600284 RAB3IL1Q8TBN0 382 aa14.08□□□□□ -0.16
VRK3-221ENST00000600284 ZNF524Q96C55 264 aa14.08□□□□□ -0.16
VRK3-221ENST00000600284 USB1Q9BQ65 265 aaKnown RBP14.08□□□□□ -0.16
VRK3-221ENST00000600284 ACTR6Q9GZN1 396 aa14.08□□□□□ -0.16
VRK3-221ENST00000600284 C12orf49Q9H741 205 aa14.08□□□□□ -0.16
VRK3-221ENST00000600284 BCO1Q9HAY6 547 aa14.08□□□□□ -0.16
VRK3-221ENST00000600284 ACER3Q9NUN7 267 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms