RNA–Protein interactions for RNA: ENST00000600259.5

VRK3-220, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-220ENST00000600259 MID1IP1Q9NPA3 183 aa5.38□□□□□ -1.55
VRK3-220ENST00000600259 TIGARQ9NQ88 270 aa5.38□□□□□ -1.55
VRK3-220ENST00000600259 ACSS1Q9NUB1 689 aaPredicted RBP5.38□□□□□ -1.55
VRK3-220ENST00000600259 GIN1Q9NXP7 522 aa5.38□□□□□ -1.55
VRK3-220ENST00000600259 LPAR3Q9UBY5 353 aa5.38□□□□□ -1.55
VRK3-220ENST00000600259 CARD8Q9Y2G2 431 aa5.38□□□□□ -1.55
VRK3-220ENST00000600259 GPC6Q9Y625 555 aaPredicted RBP5.38□□□□□ -1.55
VRK3-220ENST00000600259 MGAM2Q2M2H8 2515 aa5.38□□□□□ -1.55
VRK3-220ENST00000600259 IGKV3D-15A0A087WSY6 115 aa5.37□□□□□ -1.55
VRK3-220ENST00000600259 UQCRHLA0A096LP55 91 aa5.37□□□□□ -1.55
VRK3-220ENST00000600259 NPIPA5A0A0B4J1W7 369 aa5.37□□□□□ -1.55
VRK3-220ENST00000600259 ZNF716A6NP11 495 aa5.37□□□□□ -1.55
VRK3-220ENST00000600259 NPIPA7E9PJI5 369 aa5.37□□□□□ -1.55
VRK3-220ENST00000600259 SCDO00767 359 aa5.37□□□□□ -1.55
VRK3-220ENST00000600259 PDPK1O15530 556 aa5.37□□□□□ -1.55
VRK3-220ENST00000600259 LY6HO94772 140 aa5.37□□□□□ -1.55
VRK3-220ENST00000600259 HSPA4LO95757 839 aa5.37□□□□□ -1.55
VRK3-220ENST00000600259 HMGN2P05204 90 aaKnown RBP5.37□□□□□ -1.55
VRK3-220ENST00000600259 ALOX5P09917 674 aa5.37□□□□□ -1.55
VRK3-220ENST00000600259 NPIPA8P0DM63 369 aa5.37□□□□□ -1.55
VRK3-220ENST00000600259 SDC1P18827 310 aa5.37□□□□□ -1.55
VRK3-220ENST00000600259 GGT1P19440 569 aa5.37□□□□□ -1.55
VRK3-220ENST00000600259 USF1P22415 310 aaPredicted RBP5.37□□□□□ -1.55
VRK3-220ENST00000600259 PTAFRP25105 342 aa5.37□□□□□ -1.55
VRK3-220ENST00000600259 CD40P25942 277 aa5.37□□□□□ -1.55
VRK3-220ENST00000600259 GPC1P35052 558 aa5.37□□□□□ -1.55
VRK3-220ENST00000600259 SERPINB4P48594 390 aa5.37□□□□□ -1.55
VRK3-220ENST00000600259 RNF144AP50876 292 aaPredicted RBP5.37□□□□□ -1.55
VRK3-220ENST00000600259 P2RX1P51575 399 aa5.37□□□□□ -1.55
VRK3-220ENST00000600259 NUDT6P53370 316 aa5.37□□□□□ -1.55
VRK3-220ENST00000600259 CASP9P55211 416 aa5.37□□□□□ -1.55
VRK3-220ENST00000600259 SUMO3P55854 103 aaPredicted RBP5.37□□□□□ -1.55
VRK3-220ENST00000600259 PRSS12P56730 875 aa5.37□□□□□ -1.55
VRK3-220ENST00000600259 ETF1P62495 437 aaKnown RBP5.37□□□□□ -1.55
VRK3-220ENST00000600259 POU6F2P78424 691 aaPredicted RBP5.37□□□□□ -1.55
VRK3-220ENST00000600259 SPOCK1Q08629 439 aa5.37□□□□□ -1.55
VRK3-220ENST00000600259 RASGEF1BQ0VAM2 473 aa5.37□□□□□ -1.55
VRK3-220ENST00000600259 MLC1Q15049 377 aa5.37□□□□□ -1.55
VRK3-220ENST00000600259 PDK3Q15120 406 aa5.37□□□□□ -1.55
VRK3-220ENST00000600259 RAB35Q15286 201 aa5.37□□□□□ -1.55
VRK3-220ENST00000600259 STK11Q15831 433 aa5.37□□□□□ -1.55
VRK3-220ENST00000600259 GABRA6Q16445 453 aa5.37□□□□□ -1.55
VRK3-220ENST00000600259 NDUFAF6Q330K2 333 aa5.37□□□□□ -1.55
VRK3-220ENST00000600259 RFTN2Q52LD8 501 aaPredicted RBP5.37□□□□□ -1.55
VRK3-220ENST00000600259 ARL13AQ5H913 290 aaPredicted RBP5.37□□□□□ -1.55
VRK3-220ENST00000600259 FBXW9Q5XUX1 488 aa5.37□□□□□ -1.55
VRK3-220ENST00000600259 AP1ARQ63HQ0 302 aa5.37□□□□□ -1.55
VRK3-220ENST00000600259 CLEC2AQ6UVW9 174 aa5.37□□□□□ -1.55
VRK3-220ENST00000600259 SSX8Q7RTT4 187 aa5.37□□□□□ -1.55
VRK3-220ENST00000600259 LCA5Q86VQ0 697 aa5.37□□□□□ -1.55
VRK3-220ENST00000600259 SLC22A9Q8IVM8 553 aa5.37□□□□□ -1.55
VRK3-220ENST00000600259 MUC15Q8N387 334 aa5.37□□□□□ -1.55
VRK3-220ENST00000600259 ATP6V1C2Q8NEY4 427 aa5.37□□□□□ -1.55
VRK3-220ENST00000600259 OR2T11Q8NH01 316 aa5.37□□□□□ -1.55
VRK3-220ENST00000600259 PSMA8Q8TAA3 256 aa5.37□□□□□ -1.55
VRK3-220ENST00000600259 PHOSPHO1Q8TCT1 267 aa5.37□□□□□ -1.55
VRK3-220ENST00000600259 ZFP90Q8TF47 636 aa5.37□□□□□ -1.55
VRK3-220ENST00000600259 FAM168AQ92567 244 aa5.37□□□□□ -1.55
VRK3-220ENST00000600259 CDS1Q92903 461 aa5.37□□□□□ -1.55
VRK3-220ENST00000600259 MSI2Q96DH6 328 aaKnown RBP5.37□□□□□ -1.55
VRK3-220ENST00000600259 MUCL1Q96DR8 90 aa5.37□□□□□ -1.55
VRK3-220ENST00000600259 FAM120BQ96EK7 910 aaKnown RBP5.37□□□□□ -1.55
VRK3-220ENST00000600259 REXO5Q96IC2 774 aaKnown RBP5.37□□□□□ -1.55
VRK3-220ENST00000600259 ADAD1Q96M93 576 aaKnown RBP5.37□□□□□ -1.55
VRK3-220ENST00000600259 STACQ99469 402 aa5.37□□□□□ -1.55
VRK3-220ENST00000600259 PRR14Q9BWN1 585 aa5.37□□□□□ -1.55
VRK3-220ENST00000600259 ALG2Q9H553 416 aa5.37□□□□□ -1.55
VRK3-220ENST00000600259 MANSC1Q9H8J5 431 aa5.37□□□□□ -1.55
VRK3-220ENST00000600259 DUSP22Q9NRW4 184 aa5.37□□□□□ -1.55
VRK3-220ENST00000600259 FAIMQ9NVQ4 179 aa5.37□□□□□ -1.55
VRK3-220ENST00000600259 GPATCH2Q9NW75 528 aa5.37□□□□□ -1.55
VRK3-220ENST00000600259 KLHL9Q9P2J3 617 aa5.37□□□□□ -1.55
VRK3-220ENST00000600259 BAIAP2L1Q9UHR4 511 aa5.37□□□□□ -1.55
VRK3-220ENST00000600259 KCNE5Q9UJ90 142 aa5.37□□□□□ -1.55
VRK3-220ENST00000600259 MGAT4BQ9UQ53 548 aa5.37□□□□□ -1.55
VRK3-220ENST00000600259 STK38LQ9Y2H1 464 aa5.37□□□□□ -1.55
VRK3-220ENST00000600259 PTGDR2Q9Y5Y4 395 aa5.37□□□□□ -1.55
VRK3-220ENST00000600259 CCDC151A5D8V7 595 aa5.36□□□□□ -1.55
VRK3-220ENST00000600259 GJE1A6NN92 205 aa5.36□□□□□ -1.55
VRK3-220ENST00000600259 KIF2AO00139 706 aaPredicted RBP5.36□□□□□ -1.55
VRK3-220ENST00000600259 WIPF1O43516 503 aa5.36□□□□□ -1.55
VRK3-220ENST00000600259 AKAP10O43572 662 aa5.36□□□□□ -1.55
VRK3-220ENST00000600259 EIF4E2O60573 245 aaKnown RBP5.36□□□□□ -1.55
VRK3-220ENST00000600259 SEC22BO75396 215 aa5.36□□□□□ -1.55
VRK3-220ENST00000600259 URI1O94763 535 aaPredicted RBP5.36□□□□□ -1.55
VRK3-220ENST00000600259 GSTA1P08263 222 aa5.36□□□□□ -1.55
VRK3-220ENST00000600259 ITGA5P08648 1049 aa5.36□□□□□ -1.55
VRK3-220ENST00000600259 ZNF16P17020 682 aaPredicted RBP5.36□□□□□ -1.55
VRK3-220ENST00000600259 EFNA1P20827 205 aaPredicted RBP5.36□□□□□ -1.55
VRK3-220ENST00000600259 GZMKP49863 264 aa5.36□□□□□ -1.55
VRK3-220ENST00000600259 FABP6P51161 128 aa5.36□□□□□ -1.55
VRK3-220ENST00000600259 ZNF83P51522 516 aa5.36□□□□□ -1.55
VRK3-220ENST00000600259 EFNA4P52798 201 aa5.36□□□□□ -1.55
VRK3-220ENST00000600259 ATP12AP54707 1039 aa5.36□□□□□ -1.55
VRK3-220ENST00000600259 DNAJB13P59910 316 aa5.36□□□□□ -1.55
VRK3-220ENST00000600259 SLC25A3Q00325 362 aa5.36□□□□□ -1.55
VRK3-220ENST00000600259 SELENBP1Q13228 472 aa5.36□□□□□ -1.55
VRK3-220ENST00000600259 LASP1Q14847 261 aaKnown RBP5.36□□□□□ -1.55
VRK3-220ENST00000600259 QPRTQ15274 297 aa5.36□□□□□ -1.55
VRK3-220ENST00000600259 IMPG1Q17R60 797 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms