RNA–Protein interactions for RNA: ENST00000598972.5

DDX49-207, Transcript of DEAD-box helicase 49, humanhuman

TSL 3

Gene DDX49, Length 753 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-207ENST00000598972 SMNDC1O75940 238 aaKnown RBP eCLIP13.17□□□□□ -0.3
DDX49-207ENST00000598972 SYNGR4O95473 234 aa13.17□□□□□ -0.3
DDX49-207ENST00000598972 H6PDO95479 791 aa13.17□□□□□ -0.3
DDX49-207ENST00000598972 ANP32DO95626 131 aa13.17□□□□□ -0.3
DDX49-207ENST00000598972 UBTFL6P0CB48 400 aaPredicted RBP13.17□□□□□ -0.3
DDX49-207ENST00000598972 FCGR2AP12318 317 aa13.17□□□□□ -0.3
DDX49-207ENST00000598972 PRKCAP17252 672 aa13.17□□□□□ -0.3
DDX49-207ENST00000598972 ELK4P28324 431 aa13.17□□□□□ -0.3
DDX49-207ENST00000598972 SFTPDP35247 375 aa13.17□□□□□ -0.3
DDX49-207ENST00000598972 SLC6A8P48029 635 aa13.17□□□□□ -0.3
DDX49-207ENST00000598972 AQP5P55064 265 aa13.17□□□□□ -0.3
DDX49-207ENST00000598972 CARD18P57730 90 aa13.17□□□□□ -0.3
DDX49-207ENST00000598972 SIRPAP78324 504 aa13.17□□□□□ -0.3
DDX49-207ENST00000598972 HPCAP84074 193 aa13.17□□□□□ -0.3
DDX49-207ENST00000598972 SORDQ00796 357 aa13.17□□□□□ -0.3
DDX49-207ENST00000598972 FGFBP1Q14512 234 aa13.17□□□□□ -0.3
DDX49-207ENST00000598972 QPRTQ15274 297 aa13.17□□□□□ -0.3
DDX49-207ENST00000598972 TMEM176BQ3YBM2 270 aaPredicted RBP13.17□□□□□ -0.3
DDX49-207ENST00000598972 SLC25A53Q5H9E4 307 aa13.17□□□□□ -0.3
DDX49-207ENST00000598972 COX20Q5RI15 118 aa13.17□□□□□ -0.3
DDX49-207ENST00000598972 MSANTD1Q6ZTZ1 278 aa13.17□□□□□ -0.3
DDX49-207ENST00000598972 HMGN2P46Q86SG4 172 aa13.17□□□□□ -0.3
DDX49-207ENST00000598972 TMEM200AQ86VY9 491 aa13.17□□□□□ -0.3
DDX49-207ENST00000598972 LURAP1LQ8IV03 231 aa13.17□□□□□ -0.3
DDX49-207ENST00000598972 ANKFN1Q8N957 763 aa13.17□□□□□ -0.3
DDX49-207ENST00000598972 ATP6V1C2Q8NEY4 427 aa13.17□□□□□ -0.3
DDX49-207ENST00000598972 ZFP90Q8TF47 636 aa13.17□□□□□ -0.3
DDX49-207ENST00000598972 CKAP2Q8WWK9 683 aa13.17□□□□□ -0.3
DDX49-207ENST00000598972 OIT3Q8WWZ8 545 aa13.17□□□□□ -0.3
DDX49-207ENST00000598972 VPS33AQ96AX1 596 aa13.17□□□□□ -0.3
DDX49-207ENST00000598972 ITCHQ96J02 903 aa13.17□□□□□ -0.3
DDX49-207ENST00000598972 MRGPRX4Q96LA9 322 aa13.17□□□□□ -0.3
DDX49-207ENST00000598972 TRNT1Q96Q11 434 aaKnown RBP13.17□□□□□ -0.3
DDX49-207ENST00000598972 EBF4Q9BQW3 602 aa13.17□□□□□ -0.3
DDX49-207ENST00000598972 CCDC28BQ9BUN5 200 aa13.17□□□□□ -0.3
DDX49-207ENST00000598972 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.17□□□□□ -0.3
DDX49-207ENST00000598972 SLC6A13Q9NSD5 602 aa13.17□□□□□ -0.3
DDX49-207ENST00000598972 GALNT8Q9NY28 637 aa13.17□□□□□ -0.3
DDX49-207ENST00000598972 LIPT1Q9Y234 373 aa13.17□□□□□ -0.3
DDX49-207ENST00000598972 CCDC168Q8NDH2 2452 aa13.16□□□□□ -0.3
DDX49-207ENST00000598972 GJE1A6NN92 205 aa13.16□□□□□ -0.3
DDX49-207ENST00000598972 DNAJA2O60884 412 aa13.16□□□□□ -0.3
DDX49-207ENST00000598972 SASH3O75995 380 aa13.16□□□□□ -0.3
DDX49-207ENST00000598972 NTN1O95631 604 aa13.16□□□□□ -0.3
DDX49-207ENST00000598972 ZCCHC18P0CG32 403 aa13.16□□□□□ -0.3
DDX49-207ENST00000598972 EPXP11678 715 aa13.16□□□□□ -0.3
DDX49-207ENST00000598972 PGCP20142 388 aa13.16□□□□□ -0.3
DDX49-207ENST00000598972 SHC1P29353 583 aa13.16□□□□□ -0.3
DDX49-207ENST00000598972 PGM1P36871 562 aa13.16□□□□□ -0.3
DDX49-207ENST00000598972 STX1BP61266 288 aa13.16□□□□□ -0.3
DDX49-207ENST00000598972 SKP2Q13309 424 aa13.16□□□□□ -0.3
DDX49-207ENST00000598972 TIGD2Q4W5G0 525 aa13.16□□□□□ -0.3
DDX49-207ENST00000598972 DNAJC14Q6Y2X3 702 aaPredicted RBP13.16□□□□□ -0.3
DDX49-207ENST00000598972 LRRC74BQ6ZQY2 392 aa13.16□□□□□ -0.3
DDX49-207ENST00000598972 MAGEB18Q96M61 343 aa13.16□□□□□ -0.3
DDX49-207ENST00000598972 OPN3Q9H1Y3 402 aaPredicted RBP13.16□□□□□ -0.3
DDX49-207ENST00000598972 TPT1P8Q9HAU6 139 aa13.16□□□□□ -0.3
DDX49-207ENST00000598972 DNAJB12Q9NXW2 375 aaKnown RBP13.16□□□□□ -0.3
DDX49-207ENST00000598972 SLC35A3Q9Y2D2 325 aa13.16□□□□□ -0.3
DDX49-207ENST00000598972 CSMD2Q7Z408 3487 aa13.15□□□□□ -0.3
DDX49-207ENST00000598972 AKAP6Q13023 2319 aa13.15□□□□□ -0.3
DDX49-207ENST00000598972 A6NNC1 897 aa13.15□□□□□ -0.3
DDX49-207ENST00000598972 BCAS1O75363 584 aaPredicted RBP13.15□□□□□ -0.3
DDX49-207ENST00000598972 CTAG2O75638 210 aa13.15□□□□□ -0.3
DDX49-207ENST00000598972 PLGP00747 810 aaPredicted RBP13.15□□□□□ -0.3
DDX49-207ENST00000598972 CGAP01215 116 aa13.15□□□□□ -0.3
DDX49-207ENST00000598972 CHRM4P08173 479 aa13.15□□□□□ -0.3
DDX49-207ENST00000598972 NR2F1P10589 423 aa13.15□□□□□ -0.3
DDX49-207ENST00000598972 CPOXP36551 454 aa13.15□□□□□ -0.3
DDX49-207ENST00000598972 MAGEA8P43361 318 aa13.15□□□□□ -0.3
DDX49-207ENST00000598972 MRPL19P49406 292 aaKnown RBP13.15□□□□□ -0.3
DDX49-207ENST00000598972 CTBP2P56545 445 aa13.15□□□□□ -0.3
DDX49-207ENST00000598972 SESN3P58005 492 aa13.15□□□□□ -0.3
DDX49-207ENST00000598972 KCNJ10P78508 379 aa13.15□□□□□ -0.3
DDX49-207ENST00000598972 FAM27E3Q08E93 113 aa13.15□□□□□ -0.3
DDX49-207ENST00000598972 DAZAP2Q15038 168 aaPredicted RBP13.15□□□□□ -0.3
DDX49-207ENST00000598972 GUSBP1Q15486 140 aa13.15□□□□□ -0.3
DDX49-207ENST00000598972 GTDC1Q4AE62 458 aa13.15□□□□□ -0.3
DDX49-207ENST00000598972 C6orf10Q5SRN2 563 aa13.15□□□□□ -0.3
DDX49-207ENST00000598972 ZNF474Q6S9Z5 364 aaPredicted RBP13.15□□□□□ -0.3
DDX49-207ENST00000598972 FAM214BQ7L5A3 538 aa13.15□□□□□ -0.3
DDX49-207ENST00000598972 ZNF610Q8N9Z0 462 aa13.15□□□□□ -0.3
DDX49-207ENST00000598972 TMEM234Q8WY98 164 aa13.15□□□□□ -0.3
DDX49-207ENST00000598972 ROBO4Q8WZ75 1007 aa13.15□□□□□ -0.3
DDX49-207ENST00000598972 ST8SIA1Q92185 356 aa13.15□□□□□ -0.3
DDX49-207ENST00000598972 GTF2H4Q92759 462 aa13.15□□□□□ -0.3
DDX49-207ENST00000598972 GPATCH1Q9BRR8 931 aaKnown RBP13.15□□□□□ -0.3
DDX49-207ENST00000598972 QRSL1Q9H0R6 528 aaKnown RBP13.15□□□□□ -0.3
DDX49-207ENST00000598972 SLC38A1Q9H2H9 487 aa13.15□□□□□ -0.3
DDX49-207ENST00000598972 MTHFD2LQ9H903 347 aaPredicted RBP13.15□□□□□ -0.3
DDX49-207ENST00000598972 TIGARQ9NQ88 270 aa13.15□□□□□ -0.3
DDX49-207ENST00000598972 ITGB1BP2Q9UKP3 347 aa13.15□□□□□ -0.3
DDX49-207ENST00000598972 CLEC4AQ9UMR7 237 aa13.15□□□□□ -0.3
DDX49-207ENST00000598972 PROCRQ9UNN8 238 aa13.15□□□□□ -0.3
DDX49-207ENST00000598972 ABCA4P78363 2273 aa13.15□□□□□ -0.3
DDX49-207ENST00000598972 OTOGQ6ZRI0 2925 aa13.14□□□□□ -0.31
DDX49-207ENST00000598972 FAM221AA4D161 298 aa13.14□□□□□ -0.31
DDX49-207ENST00000598972 AGAP5A6NIR3 686 aa13.14□□□□□ -0.31
DDX49-207ENST00000598972 CLDN24A6NM45 220 aa13.14□□□□□ -0.31
DDX49-207ENST00000598972 ETV2O00321 342 aaPredicted RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms