RNA–Protein interactions for RNA: ENST00000598346.5

FARP1-223, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-223ENST00000598346 NAXDQ8IW45 347 aa4.39□□□□□ -1.71
FARP1-223ENST00000598346 LYG1Q8N1E2 194 aa4.39□□□□□ -1.71
FARP1-223ENST00000598346 RFESDQ8TAC1 157 aa4.39□□□□□ -1.71
FARP1-223ENST00000598346 TYMSOSQ8TAI1 123 aa4.39□□□□□ -1.71
FARP1-223ENST00000598346 ADIPOR1Q96A54 375 aa4.39□□□□□ -1.71
FARP1-223ENST00000598346 C16orf45Q96MC5 204 aaPredicted RBP4.39□□□□□ -1.71
FARP1-223ENST00000598346 C9orf85Q96MD7 179 aa4.39□□□□□ -1.71
FARP1-223ENST00000598346 GSDMAQ96QA5 445 aa4.39□□□□□ -1.71
FARP1-223ENST00000598346 CCDC94Q9BW85 323 aaPredicted RBP4.39□□□□□ -1.71
FARP1-223ENST00000598346 CCSER1Q9C0I3 900 aa4.39□□□□□ -1.71
FARP1-223ENST00000598346 VAT1LQ9HCJ6 419 aa4.39□□□□□ -1.71
FARP1-223ENST00000598346 TIGARQ9NQ88 270 aa4.39□□□□□ -1.71
FARP1-223ENST00000598346 IMPAD1Q9NX62 359 aa4.39□□□□□ -1.71
FARP1-223ENST00000598346 SENP1Q9P0U3 644 aa4.39□□□□□ -1.71
FARP1-223ENST00000598346 ATXN10Q9UBB4 475 aa4.39□□□□□ -1.71
FARP1-223ENST00000598346 PRODH2Q9UF12 536 aa4.39□□□□□ -1.71
FARP1-223ENST00000598346 PYCARDQ9ULZ3 195 aa4.39□□□□□ -1.71
FARP1-223ENST00000598346 MGAT4BQ9UQ53 548 aa4.39□□□□□ -1.71
FARP1-223ENST00000598346 NTNG1Q9Y2I2 539 aa4.39□□□□□ -1.71
FARP1-223ENST00000598346 ADAMTSL1Q8N6G6 1762 aa4.39□□□□□ -1.71
FARP1-223ENST00000598346 HTTP42858 3142 aa4.39□□□□□ -1.71
FARP1-223ENST00000598346 TTC28Q96AY4 2481 aa4.38□□□□□ -1.71
FARP1-223ENST00000598346 PIEZO1Q92508 2521 aa4.38□□□□□ -1.71
FARP1-223ENST00000598346 SCN4AP35499 1836 aa4.38□□□□□ -1.71
FARP1-223ENST00000598346 TRBV7-9A0A0J9YWB2 115 aa4.38□□□□□ -1.71
FARP1-223ENST00000598346 ZSCAN5CA6NGD5 496 aaPredicted RBP4.38□□□□□ -1.71
FARP1-223ENST00000598346 CCT8L1PA6NM43 557 aa4.38□□□□□ -1.71
FARP1-223ENST00000598346 ANKRD30BLA7E2S9 258 aa4.38□□□□□ -1.71
FARP1-223ENST00000598346 F8WDY8 70 aa4.38□□□□□ -1.71
FARP1-223ENST00000598346 STX10O60499 249 aa4.38□□□□□ -1.71
FARP1-223ENST00000598346 PRAMEF12O95522 483 aa4.38□□□□□ -1.71
FARP1-223ENST00000598346 ANXA4P09525 319 aaPredicted RBP4.38□□□□□ -1.71
FARP1-223ENST00000598346 PRPHP41219 470 aa4.38□□□□□ -1.71
FARP1-223ENST00000598346 METAP1P53582 386 aa4.38□□□□□ -1.71
FARP1-223ENST00000598346 MTTPP55157 894 aa4.38□□□□□ -1.71
FARP1-223ENST00000598346 RPS8P62241 208 aaKnown RBP4.38□□□□□ -1.71
FARP1-223ENST00000598346 HSF2Q03933 536 aa4.38□□□□□ -1.71
FARP1-223ENST00000598346 RUNX3Q13761 415 aa4.38□□□□□ -1.71
FARP1-223ENST00000598346 RAB35Q15286 201 aa4.38□□□□□ -1.71
FARP1-223ENST00000598346 SPECC1LQ69YQ0 1117 aa4.38□□□□□ -1.71
FARP1-223ENST00000598346 Q7L0L9 218 aa4.38□□□□□ -1.71
FARP1-223ENST00000598346 MARCH9Q86YJ5 346 aa4.38□□□□□ -1.71
FARP1-223ENST00000598346 HPS6Q86YV9 775 aa4.38□□□□□ -1.71
FARP1-223ENST00000598346 VSTM4Q8IW00 320 aa4.38□□□□□ -1.71
FARP1-223ENST00000598346 SELENOMQ8WWX9 145 aa4.38□□□□□ -1.71
FARP1-223ENST00000598346 RAB34Q9BZG1 259 aa4.38□□□□□ -1.71
FARP1-223ENST00000598346 GLT8D2Q9H1C3 349 aa4.38□□□□□ -1.71
FARP1-223ENST00000598346 RPAP3Q9H6T3 665 aaPredicted RBP4.38□□□□□ -1.71
FARP1-223ENST00000598346 IFNKQ9P0W0 207 aa4.38□□□□□ -1.71
FARP1-223ENST00000598346 BRCA1P38398 1863 aaKnown RBP4.38□□□□□ -1.71
FARP1-223ENST00000598346 CDK5RAP2Q96SN8 1893 aa4.38□□□□□ -1.71
FARP1-223ENST00000598346 CENPFP49454 3210 aa4.37□□□□□ -1.71
FARP1-223ENST00000598346 SBF1O95248 1867 aa4.37□□□□□ -1.71
FARP1-223ENST00000598346 MUC3AQ02505 3323 aa4.37□□□□□ -1.71
FARP1-223ENST00000598346 CASP8AP2Q9UKL3 1982 aa4.37□□□□□ -1.71
FARP1-223ENST00000598346 A0A0U1RQV5 110 aa4.37□□□□□ -1.71
FARP1-223ENST00000598346 ESYT2A0FGR8 921 aa4.37□□□□□ -1.71
FARP1-223ENST00000598346 RGSL1A5PLK6 1076 aa4.37□□□□□ -1.71
FARP1-223ENST00000598346 VPS26AO75436 327 aa4.37□□□□□ -1.71
FARP1-223ENST00000598346 CA3P07451 260 aa4.37□□□□□ -1.71
FARP1-223ENST00000598346 GNA11P29992 359 aa4.37□□□□□ -1.71
FARP1-223ENST00000598346 ARHGDIBP52566 201 aa4.37□□□□□ -1.71
FARP1-223ENST00000598346 MECOMQ03112 1051 aa4.37□□□□□ -1.71
FARP1-223ENST00000598346 PDZK1IP1Q13113 114 aa4.37□□□□□ -1.71
FARP1-223ENST00000598346 EXOSC2Q13868 293 aaKnown RBP4.37□□□□□ -1.71
FARP1-223ENST00000598346 SLC10A1Q14973 349 aa4.37□□□□□ -1.71
FARP1-223ENST00000598346 CDKN3Q16667 212 aa4.37□□□□□ -1.71
FARP1-223ENST00000598346 Q1RN00 199 aa4.37□□□□□ -1.71
FARP1-223ENST00000598346 LPCAT2Q7L5N7 544 aa4.37□□□□□ -1.71
FARP1-223ENST00000598346 ERICH1Q86X53 443 aa4.37□□□□□ -1.71
FARP1-223ENST00000598346 MISPQ8IVT2 679 aa4.37□□□□□ -1.71
FARP1-223ENST00000598346 RHOXF1Q8NHV9 184 aa4.37□□□□□ -1.71
FARP1-223ENST00000598346 GIPC3Q8TF64 312 aa4.37□□□□□ -1.71
FARP1-223ENST00000598346 SDR42E1Q8WUS8 393 aa4.37□□□□□ -1.71
FARP1-223ENST00000598346 ANKRD7Q92527 254 aa4.37□□□□□ -1.71
FARP1-223ENST00000598346 ART4Q93070 314 aa4.37□□□□□ -1.71
FARP1-223ENST00000598346 PINX1Q96BK5 328 aaKnown RBP4.37□□□□□ -1.71
FARP1-223ENST00000598346 PANX2Q96RD6 677 aa4.37□□□□□ -1.71
FARP1-223ENST00000598346 SPZ1Q9BXG8 430 aa4.37□□□□□ -1.71
FARP1-223ENST00000598346 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.37□□□□□ -1.71
FARP1-223ENST00000598346 ZNHIT6Q9NWK9 470 aaKnown RBP4.37□□□□□ -1.71
FARP1-223ENST00000598346 HPF1Q9NWY4 346 aa4.37□□□□□ -1.71
FARP1-223ENST00000598346 FAM120CQ9NX05 1096 aaKnown RBP4.37□□□□□ -1.71
FARP1-223ENST00000598346 ANKMY1Q9P2S6 941 aa4.37□□□□□ -1.71
FARP1-223ENST00000598346 BARX2Q9UMQ3 279 aaPredicted RBP4.37□□□□□ -1.71
FARP1-223ENST00000598346 EXOSC1Q9Y3B2 195 aaKnown RBP4.37□□□□□ -1.71
FARP1-223ENST00000598346 ATP8B3O60423 1300 aa4.37□□□□□ -1.71
FARP1-223ENST00000598346 NRXN2Q9P2S2 1712 aa4.36□□□□□ -1.71
FARP1-223ENST00000598346 CHADO15335 359 aa4.36□□□□□ -1.71
FARP1-223ENST00000598346 POLR2DO15514 142 aaKnown RBP4.36□□□□□ -1.71
FARP1-223ENST00000598346 PRKAB2O43741 272 aa4.36□□□□□ -1.71
FARP1-223ENST00000598346 LCMT2O60294 686 aaKnown RBP4.36□□□□□ -1.71
FARP1-223ENST00000598346 SCGB2A1O75556 95 aa4.36□□□□□ -1.71
FARP1-223ENST00000598346 FGFR1OPO95684 399 aaKnown RBP4.36□□□□□ -1.71
FARP1-223ENST00000598346 GSTT2P0CG29 244 aa4.36□□□□□ -1.71
FARP1-223ENST00000598346 GSTT2BP0CG30 244 aa4.36□□□□□ -1.71
FARP1-223ENST00000598346 LAMP1P11279 417 aa4.36□□□□□ -1.71
FARP1-223ENST00000598346 PAICSP22234 425 aaKnown RBP4.36□□□□□ -1.71
FARP1-223ENST00000598346 IDSP22304 550 aa4.36□□□□□ -1.71
FARP1-223ENST00000598346 GYG1P46976 350 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms