RNA–Protein interactions for RNA: ENST00000597776.1

LSM4-205, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, human

TSL 2

Gene LSM4, Length 446 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LSM4-205	ENST00000597776	IL23R	Q5VWK5	629 aa		9.35	□□□□□ -0.91
LSM4-205	ENST00000597776	SEZ6L2	Q6UXD5	910 aa		9.35	□□□□□ -0.91
LSM4-205	ENST00000597776	OLIG3	Q7RTU3	272 aa		9.35	□□□□□ -0.91
LSM4-205	ENST00000597776	ZC3HAV1	Q7Z2W4	902 aa	Known RBP	9.35	□□□□□ -0.91
LSM4-205	ENST00000597776	CLEC4F	Q8N1N0	589 aa		9.35	□□□□□ -0.91
LSM4-205	ENST00000597776	EIF1AD	Q8N9N8	165 aa	Known RBP	9.35	□□□□□ -0.91
LSM4-205	ENST00000597776	FNDC5	Q8NAU1	212 aa		9.35	□□□□□ -0.91
LSM4-205	ENST00000597776	KBTBD8	Q8NFY9	601 aa		9.35	□□□□□ -0.91
LSM4-205	ENST00000597776	OR56A1	Q8NGH5	318 aa		9.35	□□□□□ -0.91
LSM4-205	ENST00000597776	PSMA8	Q8TAA3	256 aa		9.35	□□□□□ -0.91
LSM4-205	ENST00000597776	KISS1R	Q969F8	398 aa	Predicted RBP	9.35	□□□□□ -0.91
LSM4-205	ENST00000597776	ZNF775	Q96BV0	537 aa	Predicted RBP	9.35	□□□□□ -0.91
LSM4-205	ENST00000597776	OR7D2	Q96RA2	312 aa		9.35	□□□□□ -0.91
LSM4-205	ENST00000597776	HDHD5	Q9BXW7	423 aa		9.35	□□□□□ -0.91
LSM4-205	ENST00000597776	HOXD1	Q9GZZ0	328 aa		9.35	□□□□□ -0.91
LSM4-205	ENST00000597776	QRSL1	Q9H0R6	528 aa	Known RBP	9.35	□□□□□ -0.91
LSM4-205	ENST00000597776	MKS1	Q9NXB0	559 aa		9.35	□□□□□ -0.91
LSM4-205	ENST00000597776	PRSS50	Q9UI38	385 aa		9.35	□□□□□ -0.91
LSM4-205	ENST00000597776	ING1	Q9UK53	422 aa	Predicted RBP	9.35	□□□□□ -0.91
LSM4-205	ENST00000597776	ADAM21	Q9UKJ8	722 aa		9.35	□□□□□ -0.91
LSM4-205	ENST00000597776	ACTL7B	Q9Y614	415 aa		9.35	□□□□□ -0.91
LSM4-205	ENST00000597776	CENPVL1	A0A0U1RR11	272 aa		9.34	□□□□□ -0.91
LSM4-205	ENST00000597776	ESPN	B1AK53	854 aa		9.34	□□□□□ -0.91
LSM4-205	ENST00000597776	RNF223	E7ERA6	249 aa		9.34	□□□□□ -0.91
LSM4-205	ENST00000597776	OVOL3	O00110	214 aa		9.34	□□□□□ -0.91
LSM4-205	ENST00000597776	LYZL6	O75951	148 aa		9.34	□□□□□ -0.91
LSM4-205	ENST00000597776	SOX30	O94993	753 aa		9.34	□□□□□ -0.91
LSM4-205	ENST00000597776	H6PD	O95479	791 aa		9.34	□□□□□ -0.91
LSM4-205	ENST00000597776	CD3E	P07766	207 aa		9.34	□□□□□ -0.91
LSM4-205	ENST00000597776	YES1	P07947	543 aa		9.34	□□□□□ -0.91
LSM4-205	ENST00000597776	KRT16	P08779	473 aa		9.34	□□□□□ -0.91
LSM4-205	ENST00000597776	UBL4A	P11441	157 aa		9.34	□□□□□ -0.91
LSM4-205	ENST00000597776	CDKN1A	P38936	164 aa		9.34	□□□□□ -0.91
LSM4-205	ENST00000597776	RPL3	P39023	403 aa	Known RBP	9.34	□□□□□ -0.91
LSM4-205	ENST00000597776	HBA1	P69905	142 aa		9.34	□□□□□ -0.91
LSM4-205	ENST00000597776	BSPH1	Q075Z2	132 aa		9.34	□□□□□ -0.91
LSM4-205	ENST00000597776	FAP	Q12884	760 aa		9.34	□□□□□ -0.91
LSM4-205	ENST00000597776	SELENBP1	Q13228	472 aa		9.34	□□□□□ -0.91
LSM4-205	ENST00000597776	QPRT	Q15274	297 aa		9.34	□□□□□ -0.91
LSM4-205	ENST00000597776	STK11	Q15831	433 aa		9.34	□□□□□ -0.91
LSM4-205	ENST00000597776	CLEC12B	Q2HXU8	276 aa		9.34	□□□□□ -0.91
LSM4-205	ENST00000597776	LSM12	Q3MHD2	195 aa	Known RBP	9.34	□□□□□ -0.91
LSM4-205	ENST00000597776	PDZK1	Q5T2W1	519 aa		9.34	□□□□□ -0.91
LSM4-205	ENST00000597776	ADAM5	Q6NVV9	412 aa		9.34	□□□□□ -0.91
LSM4-205	ENST00000597776	BHLHA15	Q7RTS1	189 aa	Predicted RBP	9.34	□□□□□ -0.91
LSM4-205	ENST00000597776	LSR	Q86X29	649 aa	Predicted RBP	9.34	□□□□□ -0.91
LSM4-205	ENST00000597776	OR5W2	Q8NH69	310 aa		9.34	□□□□□ -0.91
LSM4-205	ENST00000597776	SFXN5	Q8TD22	340 aa		9.34	□□□□□ -0.91
LSM4-205	ENST00000597776	FBXW5	Q969U6	566 aa		9.34	□□□□□ -0.91
LSM4-205	ENST00000597776	COQ8B	Q96D53	544 aa		9.34	□□□□□ -0.91
LSM4-205	ENST00000597776	MRGPRX4	Q96LA9	322 aa		9.34	□□□□□ -0.91
LSM4-205	ENST00000597776	OR5B2	Q96R09	309 aa		9.34	□□□□□ -0.91
LSM4-205	ENST00000597776	ZNF300	Q96RE9	604 aa	Predicted RBP	9.34	□□□□□ -0.91
LSM4-205	ENST00000597776	SDF2	Q99470	211 aa		9.34	□□□□□ -0.91
LSM4-205	ENST00000597776	PSD2	Q9BQI7	771 aa		9.34	□□□□□ -0.91
LSM4-205	ENST00000597776	POTEKP	Q9BYX7	375 aa		9.34	□□□□□ -0.91
LSM4-205	ENST00000597776	SERHL2	Q9H4I8	314 aa		9.34	□□□□□ -0.91
LSM4-205	ENST00000597776	ESRP2	Q9H6T0	727 aa	Known RBP	9.34	□□□□□ -0.91
LSM4-205	ENST00000597776	EML4	Q9HC35	981 aa	Known RBP	9.34	□□□□□ -0.91
LSM4-205	ENST00000597776	GP6	Q9HCN6	339 aa		9.34	□□□□□ -0.91
LSM4-205	ENST00000597776	ATAD3A	Q9NVI7	634 aa		9.34	□□□□□ -0.91
LSM4-205	ENST00000597776	ZDHHC2	Q9UIJ5	367 aa		9.34	□□□□□ -0.91
LSM4-205	ENST00000597776	KCNE5	Q9UJ90	142 aa		9.34	□□□□□ -0.91
LSM4-205	ENST00000597776	DTNA	Q9Y4J8	743 aa		9.34	□□□□□ -0.91
LSM4-205	ENST00000597776	MAGED1	Q9Y5V3	778 aa	Predicted RBP	9.34	□□□□□ -0.91
LSM4-205	ENST00000597776	DPRX	A6NFQ7	191 aa		9.33	□□□□□ -0.92
LSM4-205	ENST00000597776	SERINC4	A6NH21	518 aa		9.33	□□□□□ -0.92
LSM4-205	ENST00000597776	SMAD9	O15198	467 aa	Known RBP	9.33	□□□□□ -0.92
LSM4-205	ENST00000597776	ZNF264	O43296	627 aa		9.33	□□□□□ -0.92
LSM4-205	ENST00000597776	RAMP1	O60894	148 aa		9.33	□□□□□ -0.92
LSM4-205	ENST00000597776	TMCC2	O75069	709 aa		9.33	□□□□□ -0.92
LSM4-205	ENST00000597776	NDUFS7	O75251	213 aa		9.33	□□□□□ -0.92
LSM4-205	ENST00000597776	LYPLA1	O75608	230 aa	Predicted RBP	9.33	□□□□□ -0.92
LSM4-205	ENST00000597776	CYP7B1	O75881	506 aa		9.33	□□□□□ -0.92
LSM4-205	ENST00000597776	DANCR	P0C864	163 aa		9.33	□□□□□ -0.92
LSM4-205	ENST00000597776	G6PD	P11413	515 aa		9.33	□□□□□ -0.92
LSM4-205	ENST00000597776	PRPS1L1	P21108	318 aa		9.33	□□□□□ -0.92
LSM4-205	ENST00000597776	ACVR1B	P36896	505 aa		9.33	□□□□□ -0.92
LSM4-205	ENST00000597776	OR3A2	P47893	321 aa		9.33	□□□□□ -0.92
LSM4-205	ENST00000597776	CASP9	P55211	416 aa		9.33	□□□□□ -0.92
LSM4-205	ENST00000597776	RAC3	P60763	192 aa		9.33	□□□□□ -0.92
LSM4-205	ENST00000597776	SKP2	Q13309	424 aa		9.33	□□□□□ -0.92
LSM4-205	ENST00000597776	ITGAD	Q13349	1161 aa		9.33	□□□□□ -0.92
LSM4-205	ENST00000597776	CBFB	Q13951	182 aa		9.33	□□□□□ -0.92
LSM4-205	ENST00000597776	P2RY6	Q15077	328 aa		9.33	□□□□□ -0.92
LSM4-205	ENST00000597776	GPR68	Q15743	365 aa		9.33	□□□□□ -0.92
LSM4-205	ENST00000597776	PGS1	Q32NB8	556 aa		9.33	□□□□□ -0.92
LSM4-205	ENST00000597776	ZNF672	Q499Z4	452 aa	Predicted RBP	9.33	□□□□□ -0.92
LSM4-205	ENST00000597776	SLC25A53	Q5H9E4	307 aa		9.33	□□□□□ -0.92
LSM4-205	ENST00000597776	RIMKLA	Q8IXN7	391 aa		9.33	□□□□□ -0.92
LSM4-205	ENST00000597776	CLECL1	Q8IZS7	167 aa		9.33	□□□□□ -0.92
LSM4-205	ENST00000597776	SLC43A2	Q8N370	569 aa		9.33	□□□□□ -0.92
LSM4-205	ENST00000597776	TOR1AIP2	Q8NFQ8	470 aa		9.33	□□□□□ -0.92
LSM4-205	ENST00000597776	PIWIL2	Q8TC59	973 aa	Known RBP	9.33	□□□□□ -0.92
LSM4-205	ENST00000597776	TCP10L	Q8TDR4	215 aa		9.33	□□□□□ -0.92
LSM4-205	ENST00000597776	SMAP2	Q8WU79	429 aa	Predicted RBP	9.33	□□□□□ -0.92
LSM4-205	ENST00000597776	HSD17B8	Q92506	261 aa		9.33	□□□□□ -0.92
LSM4-205	ENST00000597776	ZNF75CP	Q92670	426 aa	Predicted RBP	9.33	□□□□□ -0.92
LSM4-205	ENST00000597776	GTPBP3	Q969Y2	492 aa	Known RBP	9.33	□□□□□ -0.92
LSM4-205	ENST00000597776	TUBGCP3	Q96CW5	907 aa		9.33	□□□□□ -0.92

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