RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 NUDT14O95848 222 aa9.87□□□□□ -0.83
SHKBP1-206ENST00000595523 IL18BPO95998 194 aa9.87□□□□□ -0.83
SHKBP1-206ENST00000595523 CSTAP01040 98 aa9.87□□□□□ -0.83
SHKBP1-206ENST00000595523 NUDT7P0C024 238 aa9.87□□□□□ -0.83
SHKBP1-206ENST00000595523 TFPTP0C1Z6 253 aa9.87□□□□□ -0.83
SHKBP1-206ENST00000595523 UBTFL6P0CB48 400 aaPredicted RBP9.87□□□□□ -0.83
SHKBP1-206ENST00000595523 NID1P14543 1247 aa9.87□□□□□ -0.83
SHKBP1-206ENST00000595523 ELK4P28324 431 aa9.87□□□□□ -0.83
SHKBP1-206ENST00000595523 MAGEA8P43361 318 aa9.87□□□□□ -0.83
SHKBP1-206ENST00000595523 SLC6A8P48029 635 aa9.87□□□□□ -0.83
SHKBP1-206ENST00000595523 ASCL1P50553 236 aa9.87□□□□□ -0.83
SHKBP1-206ENST00000595523 CCR4P51679 360 aa9.87□□□□□ -0.83
SHKBP1-206ENST00000595523 RAC1P63000 192 aa9.87□□□□□ -0.83
SHKBP1-206ENST00000595523 GUCY1A3Q02108 690 aa9.87□□□□□ -0.83
SHKBP1-206ENST00000595523 SNTB1Q13884 538 aaKnown RBP9.87□□□□□ -0.83
SHKBP1-206ENST00000595523 PON3Q15166 354 aa9.87□□□□□ -0.83
SHKBP1-206ENST00000595523 QPRTQ15274 297 aa9.87□□□□□ -0.83
SHKBP1-206ENST00000595523 GUSBP1Q15486 140 aa9.87□□□□□ -0.83
SHKBP1-206ENST00000595523 AGKQ53H12 422 aa9.87□□□□□ -0.83
SHKBP1-206ENST00000595523 SLC25A53Q5H9E4 307 aa9.87□□□□□ -0.83
SHKBP1-206ENST00000595523 LRRC74BQ6ZQY2 392 aa9.87□□□□□ -0.83
SHKBP1-206ENST00000595523 DMRTC2Q8IXT2 367 aaPredicted RBP9.87□□□□□ -0.83
SHKBP1-206ENST00000595523 TMCO5AQ8N6Q1 288 aa9.87□□□□□ -0.83
SHKBP1-206ENST00000595523 TOR1AIP2Q8NFQ8 470 aa9.87□□□□□ -0.83
SHKBP1-206ENST00000595523 FNDC9Q8TBE3 224 aa9.87□□□□□ -0.83
SHKBP1-206ENST00000595523 OIT3Q8WWZ8 545 aa9.87□□□□□ -0.83
SHKBP1-206ENST00000595523 ZFP3Q96NJ6 502 aa9.87□□□□□ -0.83
SHKBP1-206ENST00000595523 THUMPD3Q9BV44 507 aaKnown RBP9.87□□□□□ -0.83
SHKBP1-206ENST00000595523 FGFR1OP2Q9NVK5 253 aa9.87□□□□□ -0.83
SHKBP1-206ENST00000595523 TMEM45AQ9NWC5 275 aa9.87□□□□□ -0.83
SHKBP1-206ENST00000595523 LIPT1Q9Y234 373 aa9.87□□□□□ -0.83
SHKBP1-206ENST00000595523 GPC6Q9Y625 555 aaPredicted RBP9.87□□□□□ -0.83
SHKBP1-206ENST00000595523 A0A0G2JND7 137 aa9.86□□□□□ -0.83
SHKBP1-206ENST00000595523 A0A1W2PNV4 684 aa9.86□□□□□ -0.83
SHKBP1-206ENST00000595523 SYT5O00445 386 aa9.86□□□□□ -0.83
SHKBP1-206ENST00000595523 TNFSF11O14788 317 aa9.86□□□□□ -0.83
SHKBP1-206ENST00000595523 CYP7B1O75881 506 aa9.86□□□□□ -0.83
SHKBP1-206ENST00000595523 BCHEP06276 602 aa9.86□□□□□ -0.83
SHKBP1-206ENST00000595523 BMP2P12643 396 aa9.86□□□□□ -0.83
SHKBP1-206ENST00000595523 NCF2P19878 526 aaPredicted RBP9.86□□□□□ -0.83
SHKBP1-206ENST00000595523 ADH6P28332 368 aa9.86□□□□□ -0.83
SHKBP1-206ENST00000595523 OPRM1P35372 400 aa9.86□□□□□ -0.83
SHKBP1-206ENST00000595523 EIF1P41567 113 aaKnown RBP9.86□□□□□ -0.83
SHKBP1-206ENST00000595523 CRATP43155 626 aa9.86□□□□□ -0.83
SHKBP1-206ENST00000595523 EIF1AXP47813 144 aaKnown RBP9.86□□□□□ -0.83
SHKBP1-206ENST00000595523 ANXA11P50995 505 aaKnown RBP9.86□□□□□ -0.83
SHKBP1-206ENST00000595523 EEFSECP57772 596 aaKnown RBP9.86□□□□□ -0.83
SHKBP1-206ENST00000595523 DSTNP60981 165 aa9.86□□□□□ -0.83
SHKBP1-206ENST00000595523 IRX1P78414 480 aaPredicted RBP9.86□□□□□ -0.83
SHKBP1-206ENST00000595523 HPCAP84074 193 aa9.86□□□□□ -0.83
SHKBP1-206ENST00000595523 CBFBQ13951 182 aa9.86□□□□□ -0.83
SHKBP1-206ENST00000595523 RGNQ15493 299 aa9.86□□□□□ -0.83
SHKBP1-206ENST00000595523 RPS26P11Q5JNZ5 115 aaPredicted RBP9.86□□□□□ -0.83
SHKBP1-206ENST00000595523 EIF3MQ7L2H7 374 aaKnown RBP9.86□□□□□ -0.83
SHKBP1-206ENST00000595523 LILRA2Q8N149 483 aa9.86□□□□□ -0.83
SHKBP1-206ENST00000595523 OR10D3Q8NH80 312 aa9.86□□□□□ -0.83
SHKBP1-206ENST00000595523 SLC38A5Q8WUX1 472 aa9.86□□□□□ -0.83
SHKBP1-206ENST00000595523 CNOT9Q92600 299 aaKnown RBP9.86□□□□□ -0.83
SHKBP1-206ENST00000595523 MRGPRX4Q96LA9 322 aa9.86□□□□□ -0.83
SHKBP1-206ENST00000595523 SIKE1Q9BRV8 207 aa9.86□□□□□ -0.83
SHKBP1-206ENST00000595523 SFXN3Q9BWM7 321 aa9.86□□□□□ -0.83
SHKBP1-206ENST00000595523 TMEM120AQ9BXJ8 343 aa9.86□□□□□ -0.83
SHKBP1-206ENST00000595523 IKZF5Q9H5V7 419 aa9.86□□□□□ -0.83
SHKBP1-206ENST00000595523 CCDC134Q9H6E4 229 aa9.86□□□□□ -0.83
SHKBP1-206ENST00000595523 COQ10BQ9H8M1 238 aa9.86□□□□□ -0.83
SHKBP1-206ENST00000595523 RNF122Q9H9V4 155 aa9.86□□□□□ -0.83
SHKBP1-206ENST00000595523 MED4Q9NPJ6 270 aa9.86□□□□□ -0.83
SHKBP1-206ENST00000595523 DNAJB12Q9NXW2 375 aaKnown RBP9.86□□□□□ -0.83
SHKBP1-206ENST00000595523 VAPAQ9P0L0 249 aa9.86□□□□□ -0.83
SHKBP1-206ENST00000595523 P2RX2Q9UBL9 471 aa9.86□□□□□ -0.83
SHKBP1-206ENST00000595523 SLC35A3Q9Y2D2 325 aa9.86□□□□□ -0.83
SHKBP1-206ENST00000595523 ZNF175Q9Y473 711 aa9.86□□□□□ -0.83
SHKBP1-206ENST00000595523 A0A1W2PP18 115 aa9.85□□□□□ -0.83
SHKBP1-206ENST00000595523 EEF1E1-BLOC1S5C9J1V9 151 aa9.85□□□□□ -0.83
SHKBP1-206ENST00000595523 CLIC1O00299 241 aa9.85□□□□□ -0.83
SHKBP1-206ENST00000595523 EEF1E1O43324 174 aaKnown RBP9.85□□□□□ -0.83
SHKBP1-206ENST00000595523 CXCL13O43927 109 aa9.85□□□□□ -0.83
SHKBP1-206ENST00000595523 NR2F1P10589 423 aa9.85□□□□□ -0.83
SHKBP1-206ENST00000595523 SFTPDP35247 375 aa9.85□□□□□ -0.83
SHKBP1-206ENST00000595523 KIR2DL2P43627 348 aaPredicted RBP9.85□□□□□ -0.83
SHKBP1-206ENST00000595523 SESN3P58005 492 aa9.85□□□□□ -0.83
SHKBP1-206ENST00000595523 RPS3AP61247 264 aaKnown RBP9.85□□□□□ -0.83
SHKBP1-206ENST00000595523 KCNJ10P78508 379 aa9.85□□□□□ -0.83
SHKBP1-206ENST00000595523 VWA1Q6PCB0 445 aa9.85□□□□□ -0.83
SHKBP1-206ENST00000595523 DLEU7Q6UYE1 221 aa9.85□□□□□ -0.83
SHKBP1-206ENST00000595523 ESPNLQ6ZVH7 1005 aa9.85□□□□□ -0.83
SHKBP1-206ENST00000595523 CHMP1BQ7LBR1 199 aa9.85□□□□□ -0.83
SHKBP1-206ENST00000595523 P4HA3Q7Z4N8 544 aa9.85□□□□□ -0.83
SHKBP1-206ENST00000595523 GDF7Q7Z4P5 450 aa9.85□□□□□ -0.83
SHKBP1-206ENST00000595523 RETREG3Q86VR2 466 aa9.85□□□□□ -0.83
SHKBP1-206ENST00000595523 ARFGAP2Q8N6H7 521 aa9.85□□□□□ -0.83
SHKBP1-206ENST00000595523 OR2V1Q8NHB1 315 aa9.85□□□□□ -0.83
SHKBP1-206ENST00000595523 RNASE6Q93091 150 aaKnown RBP9.85□□□□□ -0.83
SHKBP1-206ENST00000595523 MAL2Q969L2 176 aa9.85□□□□□ -0.83
SHKBP1-206ENST00000595523 STARD4Q96DR4 205 aa9.85□□□□□ -0.83
SHKBP1-206ENST00000595523 TMEM19Q96HH6 336 aa9.85□□□□□ -0.83
SHKBP1-206ENST00000595523 KLHL15Q96M94 604 aa9.85□□□□□ -0.83
SHKBP1-206ENST00000595523 RSPO3Q9BXY4 272 aaPredicted RBP9.85□□□□□ -0.83
SHKBP1-206ENST00000595523 SRXN1Q9BYN0 137 aa9.85□□□□□ -0.83
SHKBP1-206ENST00000595523 MTHFD2LQ9H903 347 aaPredicted RBP9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms