RNA–Protein interactions for RNA: ENST00000595101.5

USE1-206, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2 BASIC

Gene USE1, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-206ENST00000595101 SNX3O60493 162 aa13.83□□□□□ -0.19
USE1-206ENST00000595101 PGM3O95394 542 aa13.83□□□□□ -0.19
USE1-206ENST00000595101 NTN1O95631 604 aa13.83□□□□□ -0.19
USE1-206ENST00000595101 GKN3PP0CG01 181 aa13.83□□□□□ -0.19
USE1-206ENST00000595101 ARAFP10398 606 aa13.83□□□□□ -0.19
USE1-206ENST00000595101 GP1BBP13224 206 aa13.83□□□□□ -0.19
USE1-206ENST00000595101 NID1P14543 1247 aa13.83□□□□□ -0.19
USE1-206ENST00000595101 ZNF17P17021 662 aa13.83□□□□□ -0.19
USE1-206ENST00000595101 HTR1EP28566 365 aa13.83□□□□□ -0.19
USE1-206ENST00000595101 CEACAM8P31997 349 aaPredicted RBP13.83□□□□□ -0.19
USE1-206ENST00000595101 PTGER4P35408 488 aa13.83□□□□□ -0.19
USE1-206ENST00000595101 MAGEA8P43361 318 aa13.83□□□□□ -0.19
USE1-206ENST00000595101 ZNF136P52737 540 aa13.83□□□□□ -0.19
USE1-206ENST00000595101 CBFBQ13951 182 aa13.83□□□□□ -0.19
USE1-206ENST00000595101 BCL2A1Q16548 175 aa13.83□□□□□ -0.19
USE1-206ENST00000595101 CTU2Q2VPK5 515 aaKnown RBP13.83□□□□□ -0.19
USE1-206ENST00000595101 RABL3Q5HYI8 236 aa13.83□□□□□ -0.19
USE1-206ENST00000595101 GCNT6Q5T4J0 391 aa13.83□□□□□ -0.19
USE1-206ENST00000595101 ZNF836Q6ZNA1 936 aa13.83□□□□□ -0.19
USE1-206ENST00000595101 COMTD1Q86VU5 262 aa13.83□□□□□ -0.19
USE1-206ENST00000595101 PTOV1Q86YD1 416 aa13.83□□□□□ -0.19
USE1-206ENST00000595101 ATP6V1C2Q8NEY4 427 aa13.83□□□□□ -0.19
USE1-206ENST00000595101 TOR1AIP2Q8NFQ8 470 aa13.83□□□□□ -0.19
USE1-206ENST00000595101 WDR60Q8WVS4 1066 aa13.83□□□□□ -0.19
USE1-206ENST00000595101 DTNBP1Q96EV8 351 aa13.83□□□□□ -0.19
USE1-206ENST00000595101 CCDC106Q9BWC9 280 aa13.83□□□□□ -0.19
USE1-206ENST00000595101 PINK1Q9BXM7 581 aa13.83□□□□□ -0.19
USE1-206ENST00000595101 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.83□□□□□ -0.19
USE1-206ENST00000595101 SLC35A3Q9Y2D2 325 aa13.83□□□□□ -0.19
USE1-206ENST00000595101 A0A0J9YW62 118 aa13.83□□□□□ -0.2
USE1-206ENST00000595101 C7orf72A4D263 438 aa13.83□□□□□ -0.2
USE1-206ENST00000595101 MBD3L4A6NDZ8 208 aaPredicted RBP13.83□□□□□ -0.2
USE1-206ENST00000595101 MBD3L3A6NE82 208 aaPredicted RBP13.83□□□□□ -0.2
USE1-206ENST00000595101 MBD3L5A6NJ08 208 aaPredicted RBP13.83□□□□□ -0.2
USE1-206ENST00000595101 EIF1AYO14602 144 aaKnown RBP13.83□□□□□ -0.2
USE1-206ENST00000595101 AGAP20933 346 aa13.83□□□□□ -0.2
USE1-206ENST00000595101 AQP1P29972 269 aa13.83□□□□□ -0.2
USE1-206ENST00000595101 CHRNB4P30926 498 aa13.83□□□□□ -0.2
USE1-206ENST00000595101 SFTPDP35247 375 aa13.83□□□□□ -0.2
USE1-206ENST00000595101 TIMP3P35625 211 aa13.83□□□□□ -0.2
USE1-206ENST00000595101 SUMO3P55854 103 aaPredicted RBP13.83□□□□□ -0.2
USE1-206ENST00000595101 SESN3P58005 492 aa13.83□□□□□ -0.2
USE1-206ENST00000595101 ART3Q13508 389 aa13.83□□□□□ -0.2
USE1-206ENST00000595101 RIPPLY2Q5TAB7 128 aa13.83□□□□□ -0.2
USE1-206ENST00000595101 ZNF787Q6DD87 383 aa13.83□□□□□ -0.2
USE1-206ENST00000595101 NANOGP8Q6NSW7 305 aa13.83□□□□□ -0.2
USE1-206ENST00000595101 LACC1Q8IV20 430 aa13.83□□□□□ -0.2
USE1-206ENST00000595101 GCNT2Q8N0V5 402 aa13.83□□□□□ -0.2
USE1-206ENST00000595101 LILRA2Q8N149 483 aa13.83□□□□□ -0.2
USE1-206ENST00000595101 LILRB4Q8NHJ6 448 aa13.83□□□□□ -0.2
USE1-206ENST00000595101 MBD3L2Q8NHZ7 208 aaPredicted RBP13.83□□□□□ -0.2
USE1-206ENST00000595101 ADGRG7Q96K78 797 aa13.83□□□□□ -0.2
USE1-206ENST00000595101 RAD21L1Q9H4I0 556 aa13.83□□□□□ -0.2
USE1-206ENST00000595101 NANOGQ9H9S0 305 aa13.83□□□□□ -0.2
USE1-206ENST00000595101 CALHM2Q9HA72 323 aa13.83□□□□□ -0.2
USE1-206ENST00000595101 USP22Q9UPT9 525 aa13.83□□□□□ -0.2
USE1-206ENST00000595101 AP4B1Q9Y6B7 739 aa13.83□□□□□ -0.2
USE1-206ENST00000595101 CAPN7Q9Y6W3 813 aa13.83□□□□□ -0.2
USE1-206ENST00000595101 HEATR5AQ86XA9 2040 aa13.83□□□□□ -0.2
USE1-206ENST00000595101 PHF3Q92576 2039 aaKnown RBP13.82□□□□□ -0.2
USE1-206ENST00000595101 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.82□□□□□ -0.2
USE1-206ENST00000595101 A0A0G2JPF8 293 aa13.82□□□□□ -0.2
USE1-206ENST00000595101 EVPLLA8MZ36 301 aa13.82□□□□□ -0.2
USE1-206ENST00000595101 HNRNPCL2B2RXH8 293 aa13.82□□□□□ -0.2
USE1-206ENST00000595101 HNRNPCL3B7ZW38 293 aa13.82□□□□□ -0.2
USE1-206ENST00000595101 TNFSF11O14788 317 aa13.82□□□□□ -0.2
USE1-206ENST00000595101 MRASO14807 208 aa13.82□□□□□ -0.2
USE1-206ENST00000595101 HNRNPCL1O60812 293 aaKnown RBP13.82□□□□□ -0.2
USE1-206ENST00000595101 HNRNPCL4P0DMR1 293 aa13.82□□□□□ -0.2
USE1-206ENST00000595101 PRG2P13727 222 aa13.82□□□□□ -0.2
USE1-206ENST00000595101 SLC6A8P48029 635 aa13.82□□□□□ -0.2
USE1-206ENST00000595101 RAC1P63000 192 aa13.82□□□□□ -0.2
USE1-206ENST00000595101 EEF1A1P68104 462 aaKnown RBP13.82□□□□□ -0.2
USE1-206ENST00000595101 CDK6Q00534 326 aa13.82□□□□□ -0.2
USE1-206ENST00000595101 CYLC2Q14093 348 aaPredicted RBP13.82□□□□□ -0.2
USE1-206ENST00000595101 SP5Q6BEB4 398 aaPredicted RBP13.82□□□□□ -0.2
USE1-206ENST00000595101 RINLQ6ZS11 566 aa13.82□□□□□ -0.2
USE1-206ENST00000595101 CPLX4Q7Z7G2 160 aa13.82□□□□□ -0.2
USE1-206ENST00000595101 PEX5LQ8IYB4 626 aa13.82□□□□□ -0.2
USE1-206ENST00000595101 MEIOBQ8N635 442 aa13.82□□□□□ -0.2
USE1-206ENST00000595101 OR10A6Q8NH74 314 aa13.82□□□□□ -0.2
USE1-206ENST00000595101 FNDC9Q8TBE3 224 aa13.82□□□□□ -0.2
USE1-206ENST00000595101 DNAJA3Q96EY1 480 aa13.82□□□□□ -0.2
USE1-206ENST00000595101 KAT8Q9H7Z6 458 aaKnown RBP13.82□□□□□ -0.2
USE1-206ENST00000595101 THUMPD1Q9NXG2 353 aaKnown RBP13.82□□□□□ -0.2
USE1-206ENST00000595101 FAM53CQ9NYF3 392 aa13.82□□□□□ -0.2
USE1-206ENST00000595101 ZNF443Q9Y2A4 671 aaPredicted RBP13.82□□□□□ -0.2
USE1-206ENST00000595101 GPC6Q9Y625 555 aaPredicted RBP13.82□□□□□ -0.2
USE1-206ENST00000595101 CDHR4A6H8M9 788 aa13.81□□□□□ -0.2
USE1-206ENST00000595101 FAM47E-STBD1D6RA91 191 aa13.81□□□□□ -0.2
USE1-206ENST00000595101 LINC01387J3KSC0 135 aa13.81□□□□□ -0.2
USE1-206ENST00000595101 ETV2O00321 342 aaPredicted RBP13.81□□□□□ -0.2
USE1-206ENST00000595101 FRS3O43559 492 aa13.81□□□□□ -0.2
USE1-206ENST00000595101 GCM2O75603 506 aaPredicted RBP13.81□□□□□ -0.2
USE1-206ENST00000595101 AQP8O94778 261 aa13.81□□□□□ -0.2
USE1-206ENST00000595101 DBIP07108 87 aaKnown RBP13.81□□□□□ -0.2
USE1-206ENST00000595101 BMP5P22003 454 aa13.81□□□□□ -0.2
USE1-206ENST00000595101 PPIBP23284 216 aaKnown RBP13.81□□□□□ -0.2
USE1-206ENST00000595101 EIF1AXP47813 144 aaKnown RBP13.81□□□□□ -0.2
USE1-206ENST00000595101 IDH2P48735 452 aaKnown RBP13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms