RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 RFXANKO14593 260 aa15.74■□□□□ 0.11
SHKBP1-203ENST00000594298 NDUFB5O43674 189 aa15.74■□□□□ 0.11
SHKBP1-203ENST00000594298 ANP32DO95626 131 aa15.74■□□□□ 0.11
SHKBP1-203ENST00000594298 KRT75O95678 551 aa15.74■□□□□ 0.11
SHKBP1-203ENST00000594298 ANGPTL1O95841 491 aa15.74■□□□□ 0.11
SHKBP1-203ENST00000594298 ATP4BP51164 291 aa15.74■□□□□ 0.11
SHKBP1-203ENST00000594298 CLDN20P56880 219 aa15.74■□□□□ 0.11
SHKBP1-203ENST00000594298 SIRPAP78324 504 aa15.74■□□□□ 0.11
SHKBP1-203ENST00000594298 PON3Q15166 354 aa15.74■□□□□ 0.11
SHKBP1-203ENST00000594298 SAXO2Q658L1 398 aa15.74■□□□□ 0.11
SHKBP1-203ENST00000594298 YTHDF3Q7Z739 585 aaKnown RBP15.74■□□□□ 0.11
SHKBP1-203ENST00000594298 MISPQ8IVT2 679 aa15.74■□□□□ 0.11
SHKBP1-203ENST00000594298 ZNF610Q8N9Z0 462 aa15.74■□□□□ 0.11
SHKBP1-203ENST00000594298 FNDC9Q8TBE3 224 aa15.74■□□□□ 0.11
SHKBP1-203ENST00000594298 Q96MF0 132 aa15.74■□□□□ 0.11
SHKBP1-203ENST00000594298 HS3ST6Q96QI5 342 aa15.74■□□□□ 0.11
SHKBP1-203ENST00000594298 GSX2Q9BZM3 304 aa15.74■□□□□ 0.11
SHKBP1-203ENST00000594298 NPHS2Q9NP85 383 aa15.74■□□□□ 0.11
SHKBP1-203ENST00000594298 FLRT3Q9NZU0 649 aa15.74■□□□□ 0.11
SHKBP1-203ENST00000594298 MED12LQ86YW9 2145 aa15.73■□□□□ 0.11
SHKBP1-203ENST00000594298 A0A1W2PQD3 144 aa15.73■□□□□ 0.11
SHKBP1-203ENST00000594298 H3BML4 177 aa15.73■□□□□ 0.11
SHKBP1-203ENST00000594298 H3BNH8 94 aa15.73■□□□□ 0.11
SHKBP1-203ENST00000594298 SEC14L5O43304 696 aa15.73■□□□□ 0.11
SHKBP1-203ENST00000594298 OXSR1O95747 527 aaPredicted RBP15.73■□□□□ 0.11
SHKBP1-203ENST00000594298 TROVE2P10155 538 aaKnown RBP eCLIP15.73■□□□□ 0.11
SHKBP1-203ENST00000594298 FCGR2AP12318 317 aa15.73■□□□□ 0.11
SHKBP1-203ENST00000594298 MAGEA8P43361 318 aa15.73■□□□□ 0.11
SHKBP1-203ENST00000594298 KCNJ5P48544 419 aa15.73■□□□□ 0.11
SHKBP1-203ENST00000594298 KHKP50053 298 aa15.73■□□□□ 0.11
SHKBP1-203ENST00000594298 RPS3AP61247 264 aaKnown RBP15.73■□□□□ 0.11
SHKBP1-203ENST00000594298 STX5Q13190 355 aa15.73■□□□□ 0.11
SHKBP1-203ENST00000594298 TMEM44Q2T9K0 475 aa15.73■□□□□ 0.11
SHKBP1-203ENST00000594298 CCNJQ5T5M9 372 aa15.73■□□□□ 0.11
SHKBP1-203ENST00000594298 FAM214BQ7L5A3 538 aa15.73■□□□□ 0.11
SHKBP1-203ENST00000594298 ZNF550Q7Z398 422 aa15.73■□□□□ 0.11
SHKBP1-203ENST00000594298 C16orf62Q7Z3J2 963 aa15.73■□□□□ 0.11
SHKBP1-203ENST00000594298 GALNT10Q86SR1 603 aa15.73■□□□□ 0.11
SHKBP1-203ENST00000594298 CLEC4FQ8N1N0 589 aa15.73■□□□□ 0.11
SHKBP1-203ENST00000594298 OR4C3Q8NH37 302 aa15.73■□□□□ 0.11
SHKBP1-203ENST00000594298 OR51I1Q9H343 314 aa15.73■□□□□ 0.11
SHKBP1-203ENST00000594298 DCTN4Q9UJW0 460 aa15.73■□□□□ 0.11
SHKBP1-203ENST00000594298 PROCRQ9UNN8 238 aa15.73■□□□□ 0.11
SHKBP1-203ENST00000594298 STX11O75558 287 aa15.72■□□□□ 0.11
SHKBP1-203ENST00000594298 VIMP08670 466 aaKnown RBP15.72■□□□□ 0.11
SHKBP1-203ENST00000594298 ZCCHC18P0CG32 403 aa15.72■□□□□ 0.11
SHKBP1-203ENST00000594298 NCF2P19878 526 aaPredicted RBP15.72■□□□□ 0.11
SHKBP1-203ENST00000594298 ATP12AP54707 1039 aa15.72■□□□□ 0.11
SHKBP1-203ENST00000594298 RPS26P62854 115 aaKnown RBP15.72■□□□□ 0.11
SHKBP1-203ENST00000594298 SQLEQ14534 574 aa15.72■□□□□ 0.11
SHKBP1-203ENST00000594298 ARHGAP11BQ3KRB8 267 aa15.72■□□□□ 0.11
SHKBP1-203ENST00000594298 C22orf34Q6ZV56 151 aa15.72■□□□□ 0.11
SHKBP1-203ENST00000594298 MTERF4Q7Z6M4 381 aaKnown RBP15.72■□□□□ 0.11
SHKBP1-203ENST00000594298 GGNQ86UU5 652 aa15.72■□□□□ 0.11
SHKBP1-203ENST00000594298 OR5D16Q8NGK9 328 aa15.72■□□□□ 0.11
SHKBP1-203ENST00000594298 OR5M1Q8NGP8 315 aa15.72■□□□□ 0.11
SHKBP1-203ENST00000594298 XAGE5Q8WWM1 108 aa15.72■□□□□ 0.11
SHKBP1-203ENST00000594298 IGFBPL1Q8WX77 278 aa15.72■□□□□ 0.11
SHKBP1-203ENST00000594298 PERPQ96FX8 193 aa15.72■□□□□ 0.11
SHKBP1-203ENST00000594298 SDF2Q99470 211 aa15.72■□□□□ 0.11
SHKBP1-203ENST00000594298 INPP5KQ9BT40 448 aa15.72■□□□□ 0.11
SHKBP1-203ENST00000594298 PLSCR4Q9NRQ2 329 aa15.72■□□□□ 0.11
SHKBP1-203ENST00000594298 MRGBPQ9NV56 204 aa15.72■□□□□ 0.11
SHKBP1-203ENST00000594298 FBXO34Q9NWN3 711 aa15.72■□□□□ 0.11
SHKBP1-203ENST00000594298 KCNE3Q9Y6H6 103 aa15.72■□□□□ 0.11
SHKBP1-203ENST00000594298 A0A0G2JND7 137 aa15.71■□□□□ 0.11
SHKBP1-203ENST00000594298 AQP8O94778 261 aa15.71■□□□□ 0.11
SHKBP1-203ENST00000594298 GSNP06396 782 aa15.71■□□□□ 0.11
SHKBP1-203ENST00000594298 GUSBP08236 651 aa15.71■□□□□ 0.11
SHKBP1-203ENST00000594298 OR12D1P0DN82 309 aa15.71■□□□□ 0.11
SHKBP1-203ENST00000594298 PAX1P15863 534 aa15.71■□□□□ 0.11
SHKBP1-203ENST00000594298 PPP3CBP16298 524 aa15.71■□□□□ 0.11
SHKBP1-203ENST00000594298 IL11P20809 199 aa15.71■□□□□ 0.11
SHKBP1-203ENST00000594298 TIGD2Q4W5G0 525 aa15.71■□□□□ 0.11
SHKBP1-203ENST00000594298 C6orf10Q5SRN2 563 aa15.71■□□□□ 0.11
SHKBP1-203ENST00000594298 METTL21CQ5VZV1 264 aa15.71■□□□□ 0.11
SHKBP1-203ENST00000594298 TNFAIP8L2Q6P589 184 aaPredicted RBP15.71■□□□□ 0.11
SHKBP1-203ENST00000594298 APOOLQ6UXV4 268 aa15.71■□□□□ 0.11
SHKBP1-203ENST00000594298 PRIMA1Q86XR5 153 aa15.71■□□□□ 0.11
SHKBP1-203ENST00000594298 OR9I1Q8NGQ6 314 aa15.71■□□□□ 0.11
SHKBP1-203ENST00000594298 OIT3Q8WWZ8 545 aa15.71■□□□□ 0.11
SHKBP1-203ENST00000594298 THOC1Q96FV9 657 aaKnown RBP15.71■□□□□ 0.11
SHKBP1-203ENST00000594298 POLE3Q9NRF9 147 aa15.71■□□□□ 0.11
SHKBP1-203ENST00000594298 STOML1Q9UBI4 398 aa15.71■□□□□ 0.11
SHKBP1-203ENST00000594298 LIPT1Q9Y234 373 aa15.71■□□□□ 0.11
SHKBP1-203ENST00000594298 NSD1Q96L73 2696 aaPredicted RBP15.71■□□□□ 0.11
SHKBP1-203ENST00000594298 FN1P02751 2386 aaKnown RBP15.7■□□□□ 0.1
SHKBP1-203ENST00000594298 TMCC2O75069 709 aa15.7■□□□□ 0.1
SHKBP1-203ENST00000594298 ZNF17P17021 662 aa15.7■□□□□ 0.1
SHKBP1-203ENST00000594298 MDH1P40925 334 aaKnown RBP15.7■□□□□ 0.1
SHKBP1-203ENST00000594298 CDKN2CP42773 168 aa15.7■□□□□ 0.1
SHKBP1-203ENST00000594298 PTH2RP49190 550 aa15.7■□□□□ 0.1
SHKBP1-203ENST00000594298 HPCAP84074 193 aa15.7■□□□□ 0.1
SHKBP1-203ENST00000594298 GUCY1A3Q02108 690 aa15.7■□□□□ 0.1
SHKBP1-203ENST00000594298 SGCBQ16585 318 aa15.7■□□□□ 0.1
SHKBP1-203ENST00000594298 HEPHL1Q6MZM0 1159 aa15.7■□□□□ 0.1
SHKBP1-203ENST00000594298 BLOC1S3Q6QNY0 202 aa15.7■□□□□ 0.1
SHKBP1-203ENST00000594298 ZAR1Q86SH2 424 aa15.7■□□□□ 0.1
SHKBP1-203ENST00000594298 RNF130Q86XS8 419 aa15.7■□□□□ 0.1
SHKBP1-203ENST00000594298 OR6K3Q8NGY3 331 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms