RNA–Protein interactions for RNA: ENST00000590619.1

DNMT1-222, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best)

Gene DNMT1, Length 231 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-222ENST00000590619 ZNF41P51814 821 aaPredicted RBP5.53□□□□□ -1.52
DNMT1-222ENST00000590619 RAG2P55895 527 aa5.53□□□□□ -1.52
DNMT1-222ENST00000590619 NAAAQ02083 359 aa5.53□□□□□ -1.52
DNMT1-222ENST00000590619 CRYMQ14894 314 aa5.53□□□□□ -1.52
DNMT1-222ENST00000590619 SPA17Q15506 151 aa5.53□□□□□ -1.52
DNMT1-222ENST00000590619 CPSF6Q16630 551 aaKnown RBP eCLIP5.53□□□□□ -1.52
DNMT1-222ENST00000590619 SLC9B1Q4ZJI4 515 aa5.53□□□□□ -1.52
DNMT1-222ENST00000590619 LIPJQ5W064 366 aa5.53□□□□□ -1.52
DNMT1-222ENST00000590619 SYT10Q6XYQ8 523 aa5.53□□□□□ -1.52
DNMT1-222ENST00000590619 JAZF1Q86VZ6 243 aa5.53□□□□□ -1.52
DNMT1-222ENST00000590619 IGDCC3Q8IVU1 814 aa5.53□□□□□ -1.52
DNMT1-222ENST00000590619 TXLNBQ8N3L3 684 aa5.53□□□□□ -1.52
DNMT1-222ENST00000590619 C17orf78Q8N4C9 275 aa5.53□□□□□ -1.52
DNMT1-222ENST00000590619 GATSQ8NAP1 163 aa5.53□□□□□ -1.52
DNMT1-222ENST00000590619 PDPRQ8NCN5 879 aa5.53□□□□□ -1.52
DNMT1-222ENST00000590619 FBXO27Q8NI29 283 aa5.53□□□□□ -1.52
DNMT1-222ENST00000590619 FBXO30Q8TB52 745 aa5.53□□□□□ -1.52
DNMT1-222ENST00000590619 ZFP90Q8TF47 636 aa5.53□□□□□ -1.52
DNMT1-222ENST00000590619 CKAP2Q8WWK9 683 aa5.53□□□□□ -1.52
DNMT1-222ENST00000590619 JADE3Q92613 823 aa5.53□□□□□ -1.52
DNMT1-222ENST00000590619 APH1AQ96BI3 265 aa5.53□□□□□ -1.52
DNMT1-222ENST00000590619 KLHL29Q96CT2 875 aa5.53□□□□□ -1.52
DNMT1-222ENST00000590619 SLC38A2Q96QD8 506 aa5.53□□□□□ -1.52
DNMT1-222ENST00000590619 KATNB1Q9BVA0 655 aa5.53□□□□□ -1.52
DNMT1-222ENST00000590619 GATA5Q9BWX5 397 aaPredicted RBP5.53□□□□□ -1.52
DNMT1-222ENST00000590619 DERL2Q9GZP9 239 aa5.53□□□□□ -1.52
DNMT1-222ENST00000590619 XAB2Q9HCS7 855 aaKnown RBP5.53□□□□□ -1.52
DNMT1-222ENST00000590619 AURKAIP1Q9NWT8 199 aaPredicted RBP5.53□□□□□ -1.52
DNMT1-222ENST00000590619 TAS2R9Q9NYW1 312 aa5.53□□□□□ -1.52
DNMT1-222ENST00000590619 REV1Q9UBZ9 1251 aa5.53□□□□□ -1.52
DNMT1-222ENST00000590619 ADAM29Q9UKF5 820 aa5.53□□□□□ -1.52
DNMT1-222ENST00000590619 NOSIPQ9Y314 301 aaKnown RBP5.53□□□□□ -1.52
DNMT1-222ENST00000590619 DNAH1Q9P2D7 4330 aa5.52□□□□□ -1.53
DNMT1-222ENST00000590619 IGKV3D-15A0A087WSY6 115 aa5.52□□□□□ -1.53
DNMT1-222ENST00000590619 GXYLT2A0PJZ3 443 aa5.52□□□□□ -1.53
DNMT1-222ENST00000590619 GJE1A6NN92 205 aa5.52□□□□□ -1.53
DNMT1-222ENST00000590619 K7EPI3 171 aa5.52□□□□□ -1.53
DNMT1-222ENST00000590619 DHHO43323 396 aa5.52□□□□□ -1.53
DNMT1-222ENST00000590619 FRS3O43559 492 aa5.52□□□□□ -1.53
DNMT1-222ENST00000590619 RP2O75695 350 aa5.52□□□□□ -1.53
DNMT1-222ENST00000590619 SEC14L2O76054 403 aa5.52□□□□□ -1.53
DNMT1-222ENST00000590619 SEMA3DO95025 777 aa5.52□□□□□ -1.53
DNMT1-222ENST00000590619 NDUFA7O95182 113 aa5.52□□□□□ -1.53
DNMT1-222ENST00000590619 WISP3O95389 354 aaPredicted RBP5.52□□□□□ -1.53
DNMT1-222ENST00000590619 GPANK1O95872 356 aa5.52□□□□□ -1.53
DNMT1-222ENST00000590619 WNT11O96014 354 aa5.52□□□□□ -1.53
DNMT1-222ENST00000590619 CD1DP15813 335 aa5.52□□□□□ -1.53
DNMT1-222ENST00000590619 PGAM1P18669 254 aa5.52□□□□□ -1.53
DNMT1-222ENST00000590619 PIK3CGP48736 1102 aa5.52□□□□□ -1.53
DNMT1-222ENST00000590619 MAPK12P53778 367 aa5.52□□□□□ -1.53
DNMT1-222ENST00000590619 SEC24CP53992 1094 aa5.52□□□□□ -1.53
DNMT1-222ENST00000590619 TPM4P67936 248 aa5.52□□□□□ -1.53
DNMT1-222ENST00000590619 MVKQ03426 396 aa5.52□□□□□ -1.53
DNMT1-222ENST00000590619 FOXF1Q12946 379 aa5.52□□□□□ -1.53
DNMT1-222ENST00000590619 DOC2BQ14184 412 aa5.52□□□□□ -1.53
DNMT1-222ENST00000590619 PDK3Q15120 406 aa5.52□□□□□ -1.53
DNMT1-222ENST00000590619 TOMM34Q15785 309 aaPredicted RBP5.52□□□□□ -1.53
DNMT1-222ENST00000590619 ERCC6LQ2NKX8 1250 aa5.52□□□□□ -1.53
DNMT1-222ENST00000590619 OXLD1Q5BKU9 147 aa5.52□□□□□ -1.53
DNMT1-222ENST00000590619 C1QTNF12Q5T7M4 302 aa5.52□□□□□ -1.53
DNMT1-222ENST00000590619 ZC3HC1Q86WB0 502 aaKnown RBP5.52□□□□□ -1.53
DNMT1-222ENST00000590619 MYLK4Q86YV6 388 aaPredicted RBP5.52□□□□□ -1.53
DNMT1-222ENST00000590619 METTL4Q8N3J2 472 aa5.52□□□□□ -1.53
DNMT1-222ENST00000590619 TEX9Q8N6V9 391 aa5.52□□□□□ -1.53
DNMT1-222ENST00000590619 C1orf162Q8NEQ5 155 aaPredicted RBP5.52□□□□□ -1.53
DNMT1-222ENST00000590619 NUP37Q8NFH4 326 aa5.52□□□□□ -1.53
DNMT1-222ENST00000590619 OR4F15Q8NGB8 312 aa5.52□□□□□ -1.53
DNMT1-222ENST00000590619 CERS2Q96G23 380 aa5.52□□□□□ -1.53
DNMT1-222ENST00000590619 SH3YL1Q96HL8 342 aaPredicted RBP5.52□□□□□ -1.53
DNMT1-222ENST00000590619 BOD1Q96IK1 185 aa5.52□□□□□ -1.53
DNMT1-222ENST00000590619 SERPINI1Q99574 410 aa5.52□□□□□ -1.53
DNMT1-222ENST00000590619 KCNS3Q9BQ31 491 aa5.52□□□□□ -1.53
DNMT1-222ENST00000590619 MRPL1Q9BYD6 325 aaKnown RBP5.52□□□□□ -1.53
DNMT1-222ENST00000590619 ZNF442Q9H7R0 627 aa5.52□□□□□ -1.53
DNMT1-222ENST00000590619 SEC61A2Q9H9S3 476 aa5.52□□□□□ -1.53
DNMT1-222ENST00000590619 TCF7L1Q9HCS4 588 aa5.52□□□□□ -1.53
DNMT1-222ENST00000590619 DYNLRB1Q9NP97 96 aa5.52□□□□□ -1.53
DNMT1-222ENST00000590619 PPANQ9NQ55 473 aaKnown RBP5.52□□□□□ -1.53
DNMT1-222ENST00000590619 SLC7A10Q9NS82 523 aa5.52□□□□□ -1.53
DNMT1-222ENST00000590619 MALT1Q9UDY8 824 aa5.52□□□□□ -1.53
DNMT1-222ENST00000590619 DCTN4Q9UJW0 460 aa5.52□□□□□ -1.53
DNMT1-222ENST00000590619 MRTO4Q9UKD2 239 aaKnown RBP5.52□□□□□ -1.53
DNMT1-222ENST00000590619 UTS2RQ9UKP6 389 aa5.52□□□□□ -1.53
DNMT1-222ENST00000590619 REXO2Q9Y3B8 237 aaKnown RBP5.52□□□□□ -1.53
DNMT1-222ENST00000590619 RNF11Q9Y3C5 154 aa5.52□□□□□ -1.53
DNMT1-222ENST00000590619 RNF114Q9Y508 228 aa5.52□□□□□ -1.53
DNMT1-222ENST00000590619 PSAT1Q9Y617 370 aa5.52□□□□□ -1.53
DNMT1-222ENST00000590619 COL7A1Q02388 2944 aa5.52□□□□□ -1.53
DNMT1-222ENST00000590619 FAM95CA0A1B0GW59 222 aa5.51□□□□□ -1.53
DNMT1-222ENST00000590619 ZNF716A6NP11 495 aa5.51□□□□□ -1.53
DNMT1-222ENST00000590619 HOXA3O43365 443 aaPredicted RBP5.51□□□□□ -1.53
DNMT1-222ENST00000590619 GUCY1B2O75343 617 aa5.51□□□□□ -1.53
DNMT1-222ENST00000590619 MRPL33O75394 65 aaKnown RBP5.51□□□□□ -1.53
DNMT1-222ENST00000590619 OXSR1O95747 527 aaPredicted RBP5.51□□□□□ -1.53
DNMT1-222ENST00000590619 OPN1MWP04001 364 aa5.51□□□□□ -1.53
DNMT1-222ENST00000590619 CRYBA1P05813 215 aa5.51□□□□□ -1.53
DNMT1-222ENST00000590619 TPM1P09493 284 aa5.51□□□□□ -1.53
DNMT1-222ENST00000590619 CSF1P09603 554 aa5.51□□□□□ -1.53
DNMT1-222ENST00000590619 CECR9P0C854 216 aa5.51□□□□□ -1.53
DNMT1-222ENST00000590619 OPN1MW2P0DN77 364 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms