RNA–Protein interactions for RNA: ENST00000590260.5

DDX39A-212, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 988 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-212ENST00000590260 KRT75O95678 551 aa16.35■□□□□ 0.21
DDX39A-212ENST00000590260 ADH6P28332 368 aa16.35■□□□□ 0.21
DDX39A-212ENST00000590260 OPRM1P35372 400 aa16.35■□□□□ 0.21
DDX39A-212ENST00000590260 KIR2DL2P43627 348 aaPredicted RBP16.35■□□□□ 0.21
DDX39A-212ENST00000590260 STX1BP61266 288 aa16.35■□□□□ 0.21
DDX39A-212ENST00000590260 C6orf10Q5SRN2 563 aa16.35■□□□□ 0.21
DDX39A-212ENST00000590260 TOR1AIP2Q8NFQ8 470 aa16.35■□□□□ 0.21
DDX39A-212ENST00000590260 CNOT9Q92600 299 aaKnown RBP16.35■□□□□ 0.21
DDX39A-212ENST00000590260 STARD4Q96DR4 205 aa16.35■□□□□ 0.21
DDX39A-212ENST00000590260 C14orf79Q96F83 325 aa16.35■□□□□ 0.21
DDX39A-212ENST00000590260 ZFP3Q96NJ6 502 aa16.35■□□□□ 0.21
DDX39A-212ENST00000590260 SFXN3Q9BWM7 321 aa16.35■□□□□ 0.21
DDX39A-212ENST00000590260 IKZF5Q9H5V7 419 aa16.35■□□□□ 0.21
DDX39A-212ENST00000590260 COQ10BQ9H8M1 238 aa16.35■□□□□ 0.21
DDX39A-212ENST00000590260 VAPAQ9P0L0 249 aa16.35■□□□□ 0.21
DDX39A-212ENST00000590260 LIPT1Q9Y234 373 aa16.35■□□□□ 0.21
DDX39A-212ENST00000590260 ZNF175Q9Y473 711 aa16.35■□□□□ 0.21
DDX39A-212ENST00000590260 GPC6Q9Y625 555 aaPredicted RBP16.35■□□□□ 0.21
DDX39A-212ENST00000590260 CXCL13O43927 109 aa16.34■□□□□ 0.21
DDX39A-212ENST00000590260 CYP7B1O75881 506 aa16.34■□□□□ 0.21
DDX39A-212ENST00000590260 NUDT14O95848 222 aa16.34■□□□□ 0.21
DDX39A-212ENST00000590260 CGAP01215 116 aa16.34■□□□□ 0.21
DDX39A-212ENST00000590260 ELK4P28324 431 aa16.34■□□□□ 0.21
DDX39A-212ENST00000590260 EIF1AXP47813 144 aaKnown RBP16.34■□□□□ 0.21
DDX39A-212ENST00000590260 CCR4P51679 360 aa16.34■□□□□ 0.21
DDX39A-212ENST00000590260 TXNL4AP83876 142 aaKnown RBP16.34■□□□□ 0.21
DDX39A-212ENST00000590260 SQLEQ14534 574 aa16.34■□□□□ 0.21
DDX39A-212ENST00000590260 AGKQ53H12 422 aa16.34■□□□□ 0.21
DDX39A-212ENST00000590260 RPS26P11Q5JNZ5 115 aaPredicted RBP16.34■□□□□ 0.21
DDX39A-212ENST00000590260 EIF3MQ7L2H7 374 aaKnown RBP16.34■□□□□ 0.21
DDX39A-212ENST00000590260 GDF7Q7Z4P5 450 aa16.34■□□□□ 0.21
DDX39A-212ENST00000590260 LILRA2Q8N149 483 aa16.34■□□□□ 0.21
DDX39A-212ENST00000590260 TMCO5AQ8N6Q1 288 aa16.34■□□□□ 0.21
DDX39A-212ENST00000590260 OR2V1Q8NHB1 315 aa16.34■□□□□ 0.21
DDX39A-212ENST00000590260 SLC38A5Q8WUX1 472 aa16.34■□□□□ 0.21
DDX39A-212ENST00000590260 OIT3Q8WWZ8 545 aa16.34■□□□□ 0.21
DDX39A-212ENST00000590260 RNASE6Q93091 150 aaKnown RBP16.34■□□□□ 0.21
DDX39A-212ENST00000590260 KLHL15Q96M94 604 aa16.34■□□□□ 0.21
DDX39A-212ENST00000590260 SRXN1Q9BYN0 137 aa16.34■□□□□ 0.21
DDX39A-212ENST00000590260 AP3D1O14617 1153 aa16.33■□□□□ 0.2
DDX39A-212ENST00000590260 ANP32DO95626 131 aa16.33■□□□□ 0.2
DDX39A-212ENST00000590260 NR2F1P10589 423 aa16.33■□□□□ 0.2
DDX39A-212ENST00000590260 BMP2P12643 396 aa16.33■□□□□ 0.2
DDX39A-212ENST00000590260 UQCRC1P31930 480 aa16.33■□□□□ 0.2
DDX39A-212ENST00000590260 SFTPDP35247 375 aa16.33■□□□□ 0.2
DDX39A-212ENST00000590260 EIF1P41567 113 aaKnown RBP16.33■□□□□ 0.2
DDX39A-212ENST00000590260 CRATP43155 626 aa16.33■□□□□ 0.2
DDX39A-212ENST00000590260 EEFSECP57772 596 aaKnown RBP16.33■□□□□ 0.2
DDX39A-212ENST00000590260 SESN3P58005 492 aa16.33■□□□□ 0.2
DDX39A-212ENST00000590260 DSTNP60981 165 aa16.33■□□□□ 0.2
DDX39A-212ENST00000590260 KCNJ10P78508 379 aa16.33■□□□□ 0.2
DDX39A-212ENST00000590260 GUCY1A3Q02108 690 aa16.33■□□□□ 0.2
DDX39A-212ENST00000590260 CBFBQ13951 182 aa16.33■□□□□ 0.2
DDX39A-212ENST00000590260 RGNQ15493 299 aa16.33■□□□□ 0.2
DDX39A-212ENST00000590260 DLEU7Q6UYE1 221 aa16.33■□□□□ 0.2
DDX39A-212ENST00000590260 BTLAQ7Z6A9 289 aa16.33■□□□□ 0.2
DDX39A-212ENST00000590260 LUZP2Q86TE4 346 aa16.33■□□□□ 0.2
DDX39A-212ENST00000590260 RETREG3Q86VR2 466 aa16.33■□□□□ 0.2
DDX39A-212ENST00000590260 VRK2Q86Y07 508 aa16.33■□□□□ 0.2
DDX39A-212ENST00000590260 MRGPRX4Q96LA9 322 aa16.33■□□□□ 0.2
DDX39A-212ENST00000590260 FGFR1OP2Q9NVK5 253 aa16.33■□□□□ 0.2
DDX39A-212ENST00000590260 TMEM45AQ9NWC5 275 aa16.33■□□□□ 0.2
DDX39A-212ENST00000590260 DNAJB12Q9NXW2 375 aaKnown RBP16.33■□□□□ 0.2
DDX39A-212ENST00000590260 GMEB1Q9Y692 573 aa16.33■□□□□ 0.2
DDX39A-212ENST00000590260 A0A0G2JND7 137 aa16.32■□□□□ 0.2
DDX39A-212ENST00000590260 A8MXE2 369 aa16.32■□□□□ 0.2
DDX39A-212ENST00000590260 EEF1E1-BLOC1S5C9J1V9 151 aa16.32■□□□□ 0.2
DDX39A-212ENST00000590260 CLIC1O00299 241 aa16.32■□□□□ 0.2
DDX39A-212ENST00000590260 EEF1E1O43324 174 aaKnown RBP16.32■□□□□ 0.2
DDX39A-212ENST00000590260 BCHEP06276 602 aa16.32■□□□□ 0.2
DDX39A-212ENST00000590260 KLK2P20151 261 aa16.32■□□□□ 0.2
DDX39A-212ENST00000590260 MAGEA8P43361 318 aa16.32■□□□□ 0.2
DDX39A-212ENST00000590260 RPS3AP61247 264 aaKnown RBP16.32■□□□□ 0.2
DDX39A-212ENST00000590260 SF3A3Q12874 501 aaKnown RBP eCLIP16.32■□□□□ 0.27e-6■■■■□ 25.9
DDX39A-212ENST00000590260 ESPNLQ6ZVH7 1005 aa16.32■□□□□ 0.2
DDX39A-212ENST00000590260 P4HA3Q7Z4N8 544 aa16.32■□□□□ 0.2
DDX39A-212ENST00000590260 MAL2Q969L2 176 aa16.32■□□□□ 0.2
DDX39A-212ENST00000590260 TMEM19Q96HH6 336 aa16.32■□□□□ 0.2
DDX39A-212ENST00000590260 TMEM120AQ9BXJ8 343 aa16.32■□□□□ 0.2
DDX39A-212ENST00000590260 ACBD3Q9H3P7 528 aa16.32■□□□□ 0.2
DDX39A-212ENST00000590260 MTHFD2LQ9H903 347 aaPredicted RBP16.32■□□□□ 0.2
DDX39A-212ENST00000590260 EXOSC3Q9NQT5 275 aaKnown RBP16.32■□□□□ 0.2
DDX39A-212ENST00000590260 RLIMQ9NVW2 624 aa16.32■□□□□ 0.2
DDX39A-212ENST00000590260 CRIM1Q9NZV1 1036 aa16.32■□□□□ 0.2
DDX39A-212ENST00000590260 SLC35A3Q9Y2D2 325 aa16.32■□□□□ 0.2
DDX39A-212ENST00000590260 ABCA12Q86UK0 2595 aa16.32■□□□□ 0.2
DDX39A-212ENST00000590260 A0A1W2PP18 115 aa16.31■□□□□ 0.2
DDX39A-212ENST00000590260 CRHP06850 196 aa16.31■□□□□ 0.2
DDX39A-212ENST00000590260 NCF2P19878 526 aaPredicted RBP16.31■□□□□ 0.2
DDX39A-212ENST00000590260 SIRPAP78324 504 aa16.31■□□□□ 0.2
DDX39A-212ENST00000590260 IRX1P78414 480 aaPredicted RBP16.31■□□□□ 0.2
DDX39A-212ENST00000590260 TLE4Q04727 773 aa16.31■□□□□ 0.2
DDX39A-212ENST00000590260 SGCBQ16585 318 aa16.31■□□□□ 0.2
DDX39A-212ENST00000590260 ZNF239Q16600 458 aaKnown RBP16.31■□□□□ 0.2
DDX39A-212ENST00000590260 TMEM176BQ3YBM2 270 aaPredicted RBP16.31■□□□□ 0.2
DDX39A-212ENST00000590260 MRPL2Q5T653 305 aaKnown RBP16.31■□□□□ 0.2
DDX39A-212ENST00000590260 HBMQ6B0K9 141 aa16.31■□□□□ 0.2
DDX39A-212ENST00000590260 ZNF474Q6S9Z5 364 aaPredicted RBP16.31■□□□□ 0.2
DDX39A-212ENST00000590260 ZNF836Q6ZNA1 936 aa16.31■□□□□ 0.2
DDX39A-212ENST00000590260 PLEKHM3Q6ZWE6 761 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms