RNA–Protein interactions for RNA: ENST00000589823.6

VMP1-210, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-210ENST00000589823 RAB3IPQ96QF0 476 aaPredicted RBP12.37□□□□□ -0.43
VMP1-210ENST00000589823 OR2B2Q9GZK3 357 aa12.37□□□□□ -0.43
VMP1-210ENST00000589823 TSPAN10Q9H1Z9 355 aaPredicted RBP12.37□□□□□ -0.43
VMP1-210ENST00000589823 LDAHQ9H6V9 325 aa12.37□□□□□ -0.43
VMP1-210ENST00000589823 EXO5Q9H790 373 aa12.37□□□□□ -0.43
VMP1-210ENST00000589823 ZDHHC11Q9H8X9 412 aa12.37□□□□□ -0.43
VMP1-210ENST00000589823 ACKR4Q9NPB9 350 aa12.37□□□□□ -0.43
VMP1-210ENST00000589823 TESQ9UGI8 421 aaKnown RBP12.37□□□□□ -0.43
VMP1-210ENST00000589823 SLC7A8Q9UHI5 535 aa12.37□□□□□ -0.43
VMP1-210ENST00000589823 NPIPA1Q9UND3 350 aa12.37□□□□□ -0.43
VMP1-210ENST00000589823 POMPQ9Y244 141 aa12.37□□□□□ -0.43
VMP1-210ENST00000589823 RPH3AQ9Y2J0 694 aaPredicted RBP12.37□□□□□ -0.43
VMP1-210ENST00000589823 NBEAQ8NFP9 2946 aa12.37□□□□□ -0.43
VMP1-210ENST00000589823 BOD1L1Q8NFC6 3051 aa12.36□□□□□ -0.43
VMP1-210ENST00000589823 TLN1Q9Y490 2541 aaKnown RBP12.36□□□□□ -0.43
VMP1-210ENST00000589823 TRGV5A0A0B4J1U4 118 aa12.36□□□□□ -0.43
VMP1-210ENST00000589823 ERICH4A6NGS2 130 aa12.36□□□□□ -0.43
VMP1-210ENST00000589823 FAAHO00519 579 aa12.36□□□□□ -0.43
VMP1-210ENST00000589823 PRKD3O94806 890 aa12.36□□□□□ -0.43
VMP1-210ENST00000589823 CELA3AP09093 270 aa12.36□□□□□ -0.43
VMP1-210ENST00000589823 GP1BBP13224 206 aa12.36□□□□□ -0.43
VMP1-210ENST00000589823 PRG2P13727 222 aa12.36□□□□□ -0.43
VMP1-210ENST00000589823 TCEA1P23193 301 aaKnown RBP12.36□□□□□ -0.43
VMP1-210ENST00000589823 ACAA2P42765 397 aaKnown RBP12.36□□□□□ -0.43
VMP1-210ENST00000589823 PLPPR5Q32ZL2 321 aa12.36□□□□□ -0.43
VMP1-210ENST00000589823 GLYR1Q49A26 553 aaPredicted RBP12.36□□□□□ -0.43
VMP1-210ENST00000589823 PRR30Q53SZ7 412 aaPredicted RBP12.36□□□□□ -0.43
VMP1-210ENST00000589823 CMPK2Q5EBM0 449 aa12.36□□□□□ -0.43
VMP1-210ENST00000589823 WIPI1Q5MNZ9 446 aaPredicted RBP12.36□□□□□ -0.43
VMP1-210ENST00000589823 RAET1LQ5VY80 246 aa12.36□□□□□ -0.43
VMP1-210ENST00000589823 VTCN1Q7Z7D3 282 aa12.36□□□□□ -0.43
VMP1-210ENST00000589823 YRDCQ86U90 279 aaKnown RBP12.36□□□□□ -0.43
VMP1-210ENST00000589823 SIAH3Q8IW03 269 aa12.36□□□□□ -0.43
VMP1-210ENST00000589823 ST8SIA1Q92185 356 aa12.36□□□□□ -0.43
VMP1-210ENST00000589823 PYURFQ96I23 114 aa12.36□□□□□ -0.43
VMP1-210ENST00000589823 BBC3Q96PG8 261 aaPredicted RBP12.36□□□□□ -0.43
VMP1-210ENST00000589823 KLHDC3Q9BQ90 382 aa12.36□□□□□ -0.43
VMP1-210ENST00000589823 ZNF559Q9BR84 538 aa12.36□□□□□ -0.43
VMP1-210ENST00000589823 PIGQQ9BRB3 760 aa12.36□□□□□ -0.43
VMP1-210ENST00000589823 ACER3Q9NUN7 267 aa12.36□□□□□ -0.43
VMP1-210ENST00000589823 ASF1BQ9NVP2 202 aa12.36□□□□□ -0.43
VMP1-210ENST00000589823 RPS6KB2Q9UBS0 482 aa12.36□□□□□ -0.43
VMP1-210ENST00000589823 NTNG1Q9Y2I2 539 aa12.36□□□□□ -0.43
VMP1-210ENST00000589823 V9GYQ6 96 aa12.36□□□□□ -0.43
VMP1-210ENST00000589823 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.35□□□□□ -0.43
VMP1-210ENST00000589823 TMEM229AB2RXF0 380 aa12.35□□□□□ -0.43
VMP1-210ENST00000589823 ZIC3O60481 467 aa12.35□□□□□ -0.43
VMP1-210ENST00000589823 HCN1O60741 890 aa12.35□□□□□ -0.43
VMP1-210ENST00000589823 ADAM11O75078 769 aa12.35□□□□□ -0.43
VMP1-210ENST00000589823 IGHG3P01860 377 aa12.35□□□□□ -0.43
VMP1-210ENST00000589823 PRKCAP17252 672 aa12.35□□□□□ -0.43
VMP1-210ENST00000589823 TNFRSF1BP20333 461 aa12.35□□□□□ -0.43
VMP1-210ENST00000589823 MST1P26927 711 aa12.35□□□□□ -0.43
VMP1-210ENST00000589823 EIF1P41567 113 aaKnown RBP12.35□□□□□ -0.43
VMP1-210ENST00000589823 OR1E2P47887 323 aa12.35□□□□□ -0.43
VMP1-210ENST00000589823 ZNF136P52737 540 aa12.35□□□□□ -0.43
VMP1-210ENST00000589823 HOXC5Q00444 222 aa12.35□□□□□ -0.43
VMP1-210ENST00000589823 KCNC4Q03721 635 aa12.35□□□□□ -0.43
VMP1-210ENST00000589823 FOXF1Q12946 379 aa12.35□□□□□ -0.43
VMP1-210ENST00000589823 TOMM34Q15785 309 aaPredicted RBP12.35□□□□□ -0.43
VMP1-210ENST00000589823 KRTCAP3Q53RY4 240 aa12.35□□□□□ -0.43
VMP1-210ENST00000589823 C1orf146Q5VVC0 180 aa12.35□□□□□ -0.43
VMP1-210ENST00000589823 ZNF324BQ6AW86 544 aaPredicted RBP12.35□□□□□ -0.43
VMP1-210ENST00000589823 WBP2NLQ6ICG8 309 aa12.35□□□□□ -0.43
VMP1-210ENST00000589823 AAGABQ6PD74 315 aa12.35□□□□□ -0.43
VMP1-210ENST00000589823 ENPP6Q6UWR7 440 aa12.35□□□□□ -0.43
VMP1-210ENST00000589823 SPATA24Q86W54 205 aa12.35□□□□□ -0.43
VMP1-210ENST00000589823 GHDCQ8N2G8 530 aa12.35□□□□□ -0.43
VMP1-210ENST00000589823 CADM2Q8N3J6 435 aa12.35□□□□□ -0.43
VMP1-210ENST00000589823 OR6T1Q8NGN1 323 aa12.35□□□□□ -0.43
VMP1-210ENST00000589823 CPT1CQ8TCG5 803 aa12.35□□□□□ -0.43
VMP1-210ENST00000589823 GPR137Q96N19 417 aa12.35□□□□□ -0.43
VMP1-210ENST00000589823 SFXN2Q96NB2 322 aa12.35□□□□□ -0.43
VMP1-210ENST00000589823 MCHR1Q99705 422 aa12.35□□□□□ -0.43
VMP1-210ENST00000589823 UGT2B28Q9BY64 529 aa12.35□□□□□ -0.43
VMP1-210ENST00000589823 TRIM2Q9C040 744 aa12.35□□□□□ -0.43
VMP1-210ENST00000589823 SLC6A15Q9H2J7 730 aa12.35□□□□□ -0.43
VMP1-210ENST00000589823 TMEM27Q9HBJ8 222 aa12.35□□□□□ -0.43
VMP1-210ENST00000589823 SELENONQ9NZV5 590 aa12.35□□□□□ -0.43
VMP1-210ENST00000589823 KMT2BQ9UMN6 2715 aaPredicted RBP12.35□□□□□ -0.43
VMP1-210ENST00000589823 C7orf72A4D263 438 aa12.34□□□□□ -0.43
VMP1-210ENST00000589823 AQP12BA6NM10 295 aa12.34□□□□□ -0.43
VMP1-210ENST00000589823 LINC01387J3KSC0 135 aa12.34□□□□□ -0.43
VMP1-210ENST00000589823 SUSD5O60279 629 aa12.34□□□□□ -0.43
VMP1-210ENST00000589823 FMO6PO60774 539 aa12.34□□□□□ -0.43
VMP1-210ENST00000589823 IFNW1P05000 195 aa12.34□□□□□ -0.43
VMP1-210ENST00000589823 NQO1P15559 274 aaKnown RBP12.34□□□□□ -0.43
VMP1-210ENST00000589823 ZNF17P17021 662 aa12.34□□□□□ -0.43
VMP1-210ENST00000589823 ADH6P28332 368 aa12.34□□□□□ -0.43
VMP1-210ENST00000589823 SLC1A3P43003 542 aa12.34□□□□□ -0.43
VMP1-210ENST00000589823 HTR3AP46098 478 aa12.34□□□□□ -0.43
VMP1-210ENST00000589823 MLLT10P55197 1068 aa12.34□□□□□ -0.43
VMP1-210ENST00000589823 SESN3P58005 492 aa12.34□□□□□ -0.43
VMP1-210ENST00000589823 MERTKQ12866 999 aa12.34□□□□□ -0.43
VMP1-210ENST00000589823 SLC25A53Q5H9E4 307 aa12.34□□□□□ -0.43
VMP1-210ENST00000589823 DEF8Q6ZN54 512 aa12.34□□□□□ -0.43
VMP1-210ENST00000589823 PLEKHM3Q6ZWE6 761 aa12.34□□□□□ -0.43
VMP1-210ENST00000589823 TRILQ7L0X0 811 aa12.34□□□□□ -0.43
VMP1-210ENST00000589823 GRINAQ7Z429 371 aa12.34□□□□□ -0.43
VMP1-210ENST00000589823 RBM45Q8IUH3 476 aaKnown RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms