RNA–Protein interactions for RNA: ENST00000589219.1

VPS25-202, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 914 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-202ENST00000589219 MED25Q71SY5 747 aa9.2□□□□□ -0.94
VPS25-202ENST00000589219 ZNF550Q7Z398 422 aa9.2□□□□□ -0.94
VPS25-202ENST00000589219 CDK20Q8IZL9 346 aa9.2□□□□□ -0.94
VPS25-202ENST00000589219 CENPSQ8N2Z9 138 aa9.2□□□□□ -0.94
VPS25-202ENST00000589219 PSD4Q8NDX1 1056 aa9.2□□□□□ -0.94
VPS25-202ENST00000589219 OR7G1Q8NGA0 311 aa9.2□□□□□ -0.94
VPS25-202ENST00000589219 OR4Q3Q8NH05 313 aa9.2□□□□□ -0.94
VPS25-202ENST00000589219 ZDHHC12Q96GR4 267 aa9.2□□□□□ -0.94
VPS25-202ENST00000589219 CENPOQ9BU64 300 aa9.2□□□□□ -0.94
VPS25-202ENST00000589219 G6PC3Q9BUM1 346 aa9.2□□□□□ -0.94
VPS25-202ENST00000589219 PRR14Q9BWN1 585 aa9.2□□□□□ -0.94
VPS25-202ENST00000589219 ALOXE3Q9BYJ1 711 aa9.2□□□□□ -0.94
VPS25-202ENST00000589219 IRAK4Q9NWZ3 460 aa9.2□□□□□ -0.94
VPS25-202ENST00000589219 GALNT8Q9NY28 637 aa9.2□□□□□ -0.94
VPS25-202ENST00000589219 CRNNQ9UBG3 495 aaPredicted RBP9.2□□□□□ -0.94
VPS25-202ENST00000589219 PRODH2Q9UF12 536 aa9.2□□□□□ -0.94
VPS25-202ENST00000589219 KLHL3Q9UH77 587 aa9.2□□□□□ -0.94
VPS25-202ENST00000589219 NTNG1Q9Y2I2 539 aa9.2□□□□□ -0.94
VPS25-202ENST00000589219 MED31Q9Y3C7 131 aa9.2□□□□□ -0.94
VPS25-202ENST00000589219 MMACHCQ9Y4U1 282 aa9.2□□□□□ -0.94
VPS25-202ENST00000589219 SPEGQ15772 3267 aa9.2□□□□□ -0.94
VPS25-202ENST00000589219 FREM2Q5SZK8 3169 aa9.19□□□□□ -0.94
VPS25-202ENST00000589219 hCG_2014768A0A024R1R8 64 aa9.19□□□□□ -0.94
VPS25-202ENST00000589219 NPIPA5A0A0B4J1W7 369 aa9.19□□□□□ -0.94
VPS25-202ENST00000589219 A0A0B4J2E0 115 aa9.19□□□□□ -0.94
VPS25-202ENST00000589219 PNMA8CA0A1B0GUJ8 204 aa9.19□□□□□ -0.94
VPS25-202ENST00000589219 A0A1B0GX12 115 aa9.19□□□□□ -0.94
VPS25-202ENST00000589219 ISPDA4D126 451 aa9.19□□□□□ -0.94
VPS25-202ENST00000589219 SYNDIG1LA6NDD5 238 aa9.19□□□□□ -0.94
VPS25-202ENST00000589219 RHPN2P1A8MT19 583 aa9.19□□□□□ -0.94
VPS25-202ENST00000589219 NPIPA7E9PJI5 369 aa9.19□□□□□ -0.94
VPS25-202ENST00000589219 ZNF670-ZNF695F2Z2N8 137 aa9.19□□□□□ -0.94
VPS25-202ENST00000589219 DSCR3O14972 297 aa9.19□□□□□ -0.94
VPS25-202ENST00000589219 YKT6O15498 198 aa9.19□□□□□ -0.94
VPS25-202ENST00000589219 HCN1O60741 890 aa9.19□□□□□ -0.94
VPS25-202ENST00000589219 HBQ1P09105 142 aa9.19□□□□□ -0.94
VPS25-202ENST00000589219 NPIPA8P0DM63 369 aa9.19□□□□□ -0.94
VPS25-202ENST00000589219 CKMT1AP12532 417 aa9.19□□□□□ -0.94
VPS25-202ENST00000589219 IFI30P13284 250 aa9.19□□□□□ -0.94
VPS25-202ENST00000589219 S1PR1P21453 382 aa9.19□□□□□ -0.94
VPS25-202ENST00000589219 TGFBR1P36897 503 aa9.19□□□□□ -0.94
VPS25-202ENST00000589219 ETV6P41212 452 aa9.19□□□□□ -0.94
VPS25-202ENST00000589219 EMDP50402 254 aa9.19□□□□□ -0.94
VPS25-202ENST00000589219 PSG6Q00889 435 aa9.19□□□□□ -0.94
VPS25-202ENST00000589219 ZNF45Q02386 682 aa9.19□□□□□ -0.94
VPS25-202ENST00000589219 FUT7Q11130 342 aa9.19□□□□□ -0.94
VPS25-202ENST00000589219 DSG2Q14126 1118 aa9.19□□□□□ -0.94
VPS25-202ENST00000589219 FGFBP1Q14512 234 aa9.19□□□□□ -0.94
VPS25-202ENST00000589219 ZNF141Q15928 474 aa9.19□□□□□ -0.94
VPS25-202ENST00000589219 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.19□□□□□ -0.94
VPS25-202ENST00000589219 TRIM16LQ309B1 348 aa9.19□□□□□ -0.94
VPS25-202ENST00000589219 CLEC12AQ5QGZ9 265 aa9.19□□□□□ -0.94
VPS25-202ENST00000589219 SLC30A6Q6NXT4 461 aa9.19□□□□□ -0.94
VPS25-202ENST00000589219 TMPRSS11FQ6ZWK6 438 aa9.19□□□□□ -0.94
VPS25-202ENST00000589219 TMPRSS7Q7RTY8 843 aa9.19□□□□□ -0.94
VPS25-202ENST00000589219 ZNF440Q8IYI8 595 aa9.19□□□□□ -0.94
VPS25-202ENST00000589219 OR52N1Q8NH53 320 aa9.19□□□□□ -0.94
VPS25-202ENST00000589219 UFD1Q92890 307 aa9.19□□□□□ -0.94
VPS25-202ENST00000589219 ABTB1Q969K4 478 aaPredicted RBP9.19□□□□□ -0.94
VPS25-202ENST00000589219 MVB12AQ96EY5 273 aa9.19□□□□□ -0.94
VPS25-202ENST00000589219 RBM18Q96H35 190 aaKnown RBP9.19□□□□□ -0.94
VPS25-202ENST00000589219 PEX11GQ96HA9 241 aa9.19□□□□□ -0.94
VPS25-202ENST00000589219 LRFN5Q96NI6 719 aa9.19□□□□□ -0.94
VPS25-202ENST00000589219 CCNL2Q96S94 520 aaPredicted RBP9.19□□□□□ -0.94
VPS25-202ENST00000589219 COQ7Q99807 217 aa9.19□□□□□ -0.94
VPS25-202ENST00000589219 CDADC1Q9BWV3 514 aa9.19□□□□□ -0.94
VPS25-202ENST00000589219 MROQ9BYG7 248 aa9.19□□□□□ -0.94
VPS25-202ENST00000589219 RBCK1Q9BYM8 510 aa9.19□□□□□ -0.94
VPS25-202ENST00000589219 C6orf62Q9GZU0 229 aaPredicted RBP9.19□□□□□ -0.94
VPS25-202ENST00000589219 OR52D1Q9H346 318 aa9.19□□□□□ -0.94
VPS25-202ENST00000589219 CCDC86Q9H6F5 360 aaKnown RBP9.19□□□□□ -0.94
VPS25-202ENST00000589219 SIDT1Q9NXL6 827 aaKnown RBP9.19□□□□□ -0.94
VPS25-202ENST00000589219 DNAJB12Q9NXW2 375 aaKnown RBP9.19□□□□□ -0.94
VPS25-202ENST00000589219 CLEC2DQ9UHP7 191 aa9.19□□□□□ -0.94
VPS25-202ENST00000589219 DAPK2Q9UIK4 370 aa9.19□□□□□ -0.94
VPS25-202ENST00000589219 KCNE5Q9UJ90 142 aa9.19□□□□□ -0.94
VPS25-202ENST00000589219 SSR3Q9UNL2 185 aa9.19□□□□□ -0.94
VPS25-202ENST00000589219 EXOGQ9Y2C4 368 aaKnown RBP9.19□□□□□ -0.94
VPS25-202ENST00000589219 COL5A1P20908 1838 aaPredicted RBP9.19□□□□□ -0.94
VPS25-202ENST00000589219 A0A1B0GTQ1 180 aa9.18□□□□□ -0.94
VPS25-202ENST00000589219 EFCAB7A8K855 629 aa9.18□□□□□ -0.94
VPS25-202ENST00000589219 TMEM150CB9EJG8 249 aa9.18□□□□□ -0.94
VPS25-202ENST00000589219 NPIPB9F8W1W9 429 aa9.18□□□□□ -0.94
VPS25-202ENST00000589219 TGFBR3LH3BV60 316 aa9.18□□□□□ -0.94
VPS25-202ENST00000589219 DYRK3O43781 588 aa9.18□□□□□ -0.94
VPS25-202ENST00000589219 DUX1O43812 170 aa9.18□□□□□ -0.94
VPS25-202ENST00000589219 GPX5O75715 221 aa9.18□□□□□ -0.94
VPS25-202ENST00000589219 PIAS2O75928 621 aa9.18□□□□□ -0.94
VPS25-202ENST00000589219 DKK1O94907 266 aa9.18□□□□□ -0.94
VPS25-202ENST00000589219 MED26O95402 600 aa9.18□□□□□ -0.94
VPS25-202ENST00000589219 IGHA1P01876 353 aa9.18□□□□□ -0.94
VPS25-202ENST00000589219 TSPAN19P0C672 248 aa9.18□□□□□ -0.94
VPS25-202ENST00000589219 PRG2P13727 222 aa9.18□□□□□ -0.94
VPS25-202ENST00000589219 BMP7P18075 431 aa9.18□□□□□ -0.94
VPS25-202ENST00000589219 ETV5P41161 510 aa9.18□□□□□ -0.94
VPS25-202ENST00000589219 SOX3P41225 446 aa9.18□□□□□ -0.94
VPS25-202ENST00000589219 GPR3P46089 330 aa9.18□□□□□ -0.94
VPS25-202ENST00000589219 CAPZA2P47755 286 aa9.18□□□□□ -0.94
VPS25-202ENST00000589219 ARRB1P49407 418 aaPredicted RBP9.18□□□□□ -0.94
VPS25-202ENST00000589219 PPM1FP49593 454 aaPredicted RBP9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms