RNA–Protein interactions for RNA: ENST00000588410.1

TPM4-208, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-208ENST00000588410 GLRX2Q9NS18 164 aa17.53■□□□□ 0.4
TPM4-208ENST00000588410 KCNE5Q9UJ90 142 aa17.53■□□□□ 0.4
TPM4-208ENST00000588410 CLEC4AQ9UMR7 237 aa17.53■□□□□ 0.4
TPM4-208ENST00000588410 KIAA1549Q9HCM3 1950 aa17.53■□□□□ 0.4
TPM4-208ENST00000588410 RFXANKO14593 260 aa17.52■□□□□ 0.4
TPM4-208ENST00000588410 CGAP01215 116 aa17.52■□□□□ 0.4
TPM4-208ENST00000588410 GSNP06396 782 aa17.52■□□□□ 0.4
TPM4-208ENST00000588410 UBTFL6P0CB48 400 aaPredicted RBP17.52■□□□□ 0.4
TPM4-208ENST00000588410 PCYT1AP49585 367 aa17.52■□□□□ 0.4
TPM4-208ENST00000588410 SKP2Q13309 424 aa17.52■□□□□ 0.4
TPM4-208ENST00000588410 TMEM176BQ3YBM2 270 aaPredicted RBP17.52■□□□□ 0.4
TPM4-208ENST00000588410 TYW3Q6IPR3 259 aaKnown RBP17.52■□□□□ 0.4
TPM4-208ENST00000588410 ZNF474Q6S9Z5 364 aaPredicted RBP17.52■□□□□ 0.4
TPM4-208ENST00000588410 ZNF619Q8N2I2 560 aa17.52■□□□□ 0.4
TPM4-208ENST00000588410 ZNF610Q8N9Z0 462 aa17.52■□□□□ 0.4
TPM4-208ENST00000588410 OR6K3Q8NGY3 331 aa17.52■□□□□ 0.4
TPM4-208ENST00000588410 RMND5AQ9H871 391 aa17.52■□□□□ 0.4
TPM4-208ENST00000588410 ZIM2Q9NZV7 527 aa17.52■□□□□ 0.4
TPM4-208ENST00000588410 LIPT1Q9Y234 373 aa17.52■□□□□ 0.4
TPM4-208ENST00000588410 SLC35A3Q9Y2D2 325 aa17.52■□□□□ 0.4
TPM4-208ENST00000588410 USH1CQ9Y6N9 552 aa17.52■□□□□ 0.4
TPM4-208ENST00000588410 ARHGAP21Q5T5U3 1957 aa17.51■□□□□ 0.39
TPM4-208ENST00000588410 CENPVL1A0A0U1RR11 272 aa17.51■□□□□ 0.39
TPM4-208ENST00000588410 HMGN4O00479 90 aa17.51■□□□□ 0.39
TPM4-208ENST00000588410 SS18L1O75177 396 aaPredicted RBP17.51■□□□□ 0.39
TPM4-208ENST00000588410 ANP32DO95626 131 aa17.51■□□□□ 0.39
TPM4-208ENST00000588410 KRT75O95678 551 aa17.51■□□□□ 0.39
TPM4-208ENST00000588410 PGCP20142 388 aa17.51■□□□□ 0.39
TPM4-208ENST00000588410 SHC1P29353 583 aa17.51■□□□□ 0.39
TPM4-208ENST00000588410 SLC7A1P30825 629 aa17.51■□□□□ 0.39
TPM4-208ENST00000588410 CDKN2CP42773 168 aa17.51■□□□□ 0.39
TPM4-208ENST00000588410 SELENBP1Q13228 472 aa17.51■□□□□ 0.39
TPM4-208ENST00000588410 GUSBP1Q15486 140 aa17.51■□□□□ 0.39
TPM4-208ENST00000588410 EXOC3L2Q2M3D2 409 aa17.51■□□□□ 0.39
TPM4-208ENST00000588410 DCHS2Q6V1P9 2916 aa17.51■□□□□ 0.39
TPM4-208ENST00000588410 MAVSQ7Z434 540 aa17.51■□□□□ 0.39
TPM4-208ENST00000588410 DYDC1Q8WWB3 177 aa17.51■□□□□ 0.39
TPM4-208ENST00000588410 TMEM234Q8WY98 164 aa17.51■□□□□ 0.39
TPM4-208ENST00000588410 CPNE4Q96A23 557 aaPredicted RBP17.51■□□□□ 0.39
TPM4-208ENST00000588410 C7orf26Q96N11 449 aa17.51■□□□□ 0.39
TPM4-208ENST00000588410 OR52B2Q96RD2 323 aa17.51■□□□□ 0.39
TPM4-208ENST00000588410 SAP130Q9H0E3 1048 aa17.51■□□□□ 0.39
TPM4-208ENST00000588410 FANCFQ9NPI8 374 aa17.51■□□□□ 0.39
TPM4-208ENST00000588410 SERINC1Q9NRX5 453 aa17.51■□□□□ 0.39
TPM4-208ENST00000588410 ST6GALNAC1Q9NSC7 600 aaPredicted RBP17.51■□□□□ 0.39
TPM4-208ENST00000588410 ARGLU1Q9NWB6 273 aaPredicted RBP17.51■□□□□ 0.39
TPM4-208ENST00000588410 C16orf97H3BN30 126 aa17.5■□□□□ 0.39
TPM4-208ENST00000588410 EFNA2O43921 213 aa17.5■□□□□ 0.39
TPM4-208ENST00000588410 H6PDO95479 791 aa17.5■□□□□ 0.39
TPM4-208ENST00000588410 DNASE1P24855 282 aa17.5■□□□□ 0.39
TPM4-208ENST00000588410 ART1P52961 327 aa17.5■□□□□ 0.39
TPM4-208ENST00000588410 CHRNEQ04844 493 aa17.5■□□□□ 0.39
TPM4-208ENST00000588410 FUT5Q11128 374 aa17.5■□□□□ 0.39
TPM4-208ENST00000588410 MAPK14Q16539 360 aa17.5■□□□□ 0.39
TPM4-208ENST00000588410 SLC25A53Q5H9E4 307 aa17.5■□□□□ 0.39
TPM4-208ENST00000588410 FRRS1Q6ZNA5 592 aa17.5■□□□□ 0.39
TPM4-208ENST00000588410 MIER2Q8N344 545 aa17.5■□□□□ 0.39
TPM4-208ENST00000588410 PNPT1Q8TCS8 783 aaKnown RBP17.5■□□□□ 0.39
TPM4-208ENST00000588410 ZFP90Q8TF47 636 aa17.5■□□□□ 0.39
TPM4-208ENST00000588410 ROBO4Q8WZ75 1007 aa17.5■□□□□ 0.39
TPM4-208ENST00000588410 ST8SIA1Q92185 356 aa17.5■□□□□ 0.39
TPM4-208ENST00000588410 NINJ1Q92982 152 aa17.5■□□□□ 0.39
TPM4-208ENST00000588410 TRNT1Q96Q11 434 aaKnown RBP17.5■□□□□ 0.39
TPM4-208ENST00000588410 MED18Q9BUE0 208 aa17.5■□□□□ 0.39
TPM4-208ENST00000588410 SDR39U1Q9NRG7 319 aaPredicted RBP17.5■□□□□ 0.39
TPM4-208ENST00000588410 PLSCR4Q9NRQ2 329 aa17.5■□□□□ 0.39
TPM4-208ENST00000588410 ST6GALNAC2Q9UJ37 374 aa17.5■□□□□ 0.39
TPM4-208ENST00000588410 TESMINQ9Y4I5 508 aa17.5■□□□□ 0.39
TPM4-208ENST00000588410 PDZD2O15018 2839 aa17.49■□□□□ 0.39
TPM4-208ENST00000588410 NTN1O95631 604 aa17.49■□□□□ 0.39
TPM4-208ENST00000588410 NR2F1P10589 423 aa17.49■□□□□ 0.39
TPM4-208ENST00000588410 UGT2B10P36537 528 aa17.49■□□□□ 0.39
TPM4-208ENST00000588410 POLR2JP52435 117 aaKnown RBP17.49■□□□□ 0.39
TPM4-208ENST00000588410 STX1BP61266 288 aa17.49■□□□□ 0.39
TPM4-208ENST00000588410 MERTKQ12866 999 aa17.49■□□□□ 0.39
TPM4-208ENST00000588410 GNA13Q14344 377 aa17.49■□□□□ 0.39
TPM4-208ENST00000588410 RNPS1Q15287 305 aaKnown RBP17.49■□□□□ 0.39
TPM4-208ENST00000588410 POU4F3Q15319 338 aa17.49■□□□□ 0.39
TPM4-208ENST00000588410 ZNF239Q16600 458 aaKnown RBP17.49■□□□□ 0.39
TPM4-208ENST00000588410 TIGD2Q4W5G0 525 aa17.49■□□□□ 0.39
TPM4-208ENST00000588410 C3orf33Q6P1S2 294 aa17.49■□□□□ 0.39
TPM4-208ENST00000588410 EPGNQ6UW88 154 aa17.49■□□□□ 0.39
TPM4-208ENST00000588410 DNAJC14Q6Y2X3 702 aaPredicted RBP17.49■□□□□ 0.39
TPM4-208ENST00000588410 HDXQ7Z353 690 aa17.49■□□□□ 0.39
TPM4-208ENST00000588410 STK32CQ86UX6 486 aa17.49■□□□□ 0.39
TPM4-208ENST00000588410 ANKFN1Q8N957 763 aa17.49■□□□□ 0.39
TPM4-208ENST00000588410 ZNF563Q8TA94 476 aa17.49■□□□□ 0.39
TPM4-208ENST00000588410 ITCHQ96J02 903 aa17.49■□□□□ 0.39
TPM4-208ENST00000588410 KLHL4Q9C0H6 718 aa17.49■□□□□ 0.39
TPM4-208ENST00000588410 KLHL28Q9NXS3 571 aa17.49■□□□□ 0.39
TPM4-208ENST00000588410 ZNF226Q9NYT6 803 aa17.49■□□□□ 0.39
TPM4-208ENST00000588410 ETV2O00321 342 aaPredicted RBP17.48■□□□□ 0.39
TPM4-208ENST00000588410 POLR3GO15318 223 aaPredicted RBP17.48■□□□□ 0.39
TPM4-208ENST00000588410 C1QCP02747 245 aa17.48■□□□□ 0.39
TPM4-208ENST00000588410 CD1EP15812 388 aa17.48■□□□□ 0.39
TPM4-208ENST00000588410 RYKP34925 604 aa17.48■□□□□ 0.39
TPM4-208ENST00000588410 PGM1P36871 562 aa17.48■□□□□ 0.39
TPM4-208ENST00000588410 IST1P53990 364 aa17.48■□□□□ 0.39
TPM4-208ENST00000588410 SESN3P58005 492 aa17.48■□□□□ 0.39
TPM4-208ENST00000588410 KCNJ10P78508 379 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms